Literature DB >> 28537749

Water Microsolvation Can Switch the Binding Mode of Ni(II) with Small Peptides.

Robert C Dunbar1, Jonathan Martens2, Giel Berden2, Jos Oomens2,3.   

Abstract

Ni(II) ions can be caged by surrounding peptide ligands in two basic binding patterns: the "iminol" (IM) binding pattern, where chelation occurs by deprotonated amide nitrogens, or the charge-solvated (CS) binding pattern, where chelation occurs by amide carbonyl oxygens. Gas-phase observation may clarify the factors affecting this choice in solution and in peptide and protein matrices. Infrared spectroscopic determination of gas-phase structures shows here how microsolvation by just one water molecule switches the balance of this choice from IM to CS for the Ni2+Gly3 complex, in contrast with the always-CS structure of the Ni2+Gly4 complex. Quantum-chemical calculations indicate that CS complexation is even more favored in the aqueous limit. Considering gas-phase conditions as comparable to low-pH solutions can reconcile this prediction with the common observation of IM-type binding in solutions at higher pH. This is likely the first gas-phase observation of solvation-induced IM-to-CS transition in oligopeptide complexes with doubly charged transition-metal ions.

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Year:  2017        PMID: 28537749     DOI: 10.1021/acs.jpclett.7b00973

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  4 in total

1.  Binding of Divalent Metal Ions with Deprotonated Peptides: Do Gas-Phase Anions Parallel the Condensed Phase?

Authors:  Robert C Dunbar; Jonathan Martens; Giel Berden; Jos Oomens
Journal:  J Phys Chem A       Date:  2018-06-13       Impact factor: 2.781

2.  Molecular Properties of Bare and Microhydrated Vitamin B5-Calcium Complexes.

Authors:  Davide Corinti; Barbara Chiavarino; Debora Scuderi; Caterina Fraschetti; Antonello Filippi; Simonetta Fornarini; Maria Elisa Crestoni
Journal:  Int J Mol Sci       Date:  2021-01-12       Impact factor: 5.923

Review 3.  Unraveling the unknown areas of the human metabolome: the role of infrared ion spectroscopy.

Authors:  Jonathan Martens; Giel Berden; Herman Bentlage; Karlien L M Coene; Udo F Engelke; David Wishart; Monique van Scherpenzeel; Leo A J Kluijtmans; Ron A Wevers; Jos Oomens
Journal:  J Inherit Metab Dis       Date:  2018-03-19       Impact factor: 4.982

4.  Infrared multiple photon dissociation of cesium iodide clusters doped with mono-, di- and triglycine.

Authors:  Jakob Heller; Milan Ončák; Nina K Bersenkowitsch; Christian van der Linde; Martin K Beyer
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2018-10-04       Impact factor: 1.067

  4 in total

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