Literature DB >> 28525754

Regulated Intron Removal Integrates Motivational State and Experience.

Jason Gill1, Younshim Park1, J P McGinnis1, Consuelo Perez-Sanchez2, Marco Blanchette2, Kausik Si3.   

Abstract

Myriad experiences produce transient memory, yet, contingent on the internal state of the organism and the saliency of the experience, only some memories persist over time. How experience and internal state influence the duration of memory at the molecular level remains unknown. A self-assembled aggregated state of Drosophila Orb2A protein is required specifically for long-lasting memory. We report that in the adult fly brain the mRNA encoding Orb2A protein exists in an unspliced non-protein-coding form. The convergence of experience and internal drive transiently increases the spliced protein-coding Orb2A mRNA. A screen identified pasilla, the fly ortholog of mammalian Nova-1/2, as a mediator of Orb2A mRNA processing. A single-nucleotide substitution in the intronic region that reduces Pasilla binding and intron removal selectively impairs long-term memory. We posit that pasilla-mediated processing of unspliced Orb2A mRNA integrates experience and internal state to control Orb2A protein abundance and long-term memory formation.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Nova; amyloid; detained-intron; intron retention; long-term memory; motivation; pasilla; poised splicing; prion

Mesh:

Substances:

Year:  2017        PMID: 28525754      PMCID: PMC5527978          DOI: 10.1016/j.cell.2017.05.006

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  75 in total

1.  A CaMK IV responsive RNA element mediates depolarization-induced alternative splicing of ion channels.

Authors:  J Xie; D L Black
Journal:  Nature       Date:  2001-04-19       Impact factor: 49.962

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

3.  Critical role of amyloid-like oligomers of Drosophila Orb2 in the persistence of memory.

Authors:  Amitabha Majumdar; Wanda Colón Cesario; Erica White-Grindley; Huoqing Jiang; Fengzhen Ren; Mohammed Repon Khan; Liying Li; Edward Man-Lik Choi; Kasthuri Kannan; Fengli Guo; Jay Unruh; Brian Slaughter; Kausik Si
Journal:  Cell       Date:  2012-01-26       Impact factor: 41.582

4.  Removal of retained introns regulates translation in the rapidly developing gametophyte of Marsilea vestita.

Authors:  Thomas C Boothby; Richard S Zipper; Corine M van der Weele; Stephen M Wolniak
Journal:  Dev Cell       Date:  2013-02-21       Impact factor: 12.270

5.  A neural circuit mechanism integrating motivational state with memory expression in Drosophila.

Authors:  Michael J Krashes; Shamik DasGupta; Andrew Vreede; Benjamin White; J Douglas Armstrong; Scott Waddell
Journal:  Cell       Date:  2009-10-16       Impact factor: 41.582

6.  The Neuronal Splicing Factor Nova Co-Localizes with Target RNAs in the Dendrite.

Authors:  Claudia Racca; Alejandra Gardiol; Taesun Eom; Jernej Ule; Antoine Triller; Robert B Darnell
Journal:  Front Neural Circuits       Date:  2010-03-03       Impact factor: 3.492

7.  Intron retention as a posttranscriptional regulatory mechanism of neurotoxin expression at early life stages of the starlet anemone Nematostella vectensis.

Authors:  Yehu Moran; Hagar Weinberger; Adam M Reitzel; James C Sullivan; Roy Kahn; Dalia Gordon; John R Finnerty; Michael Gurevitz
Journal:  J Mol Biol       Date:  2008-05-11       Impact factor: 5.469

8.  A neuronal isoform of CPEB regulates local protein synthesis and stabilizes synapse-specific long-term facilitation in aplysia.

Authors:  Kausik Si; Maurizio Giustetto; Amit Etkin; Ruby Hsu; Agnieszka M Janisiewicz; Maria Conchetta Miniaci; Joung-Hun Kim; Huixiang Zhu; Eric R Kandel
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

9.  Detained introns are a novel, widespread class of post-transcriptionally spliced introns.

Authors:  Paul L Boutz; Arjun Bhutkar; Phillip A Sharp
Journal:  Genes Dev       Date:  2015-01-01       Impact factor: 11.361

10.  Drosophila CPEB Orb2A mediates memory independent of Its RNA-binding domain.

Authors:  Sebastian Krüttner; Barbara Stepien; Jasprina N Noordermeer; Mieke A Mommaas; Karl Mechtler; Barry J Dickson; Krystyna Keleman
Journal:  Neuron       Date:  2012-10-17       Impact factor: 17.173

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  12 in total

Review 1.  Translational Control by Prion-like Proteins.

Authors:  Liying Li; J P McGinnis; Kausik Si
Journal:  Trends Cell Biol       Date:  2018-03-09       Impact factor: 20.808

Review 2.  Biology of RNA Surveillance in Development and Disease.

Authors:  Brice Laffleur; Uttiya Basu
Journal:  Trends Cell Biol       Date:  2019-02-10       Impact factor: 20.808

3.  LncRNA-dependent nuclear stress bodies promote intron retention through SR protein phosphorylation.

Authors:  Kensuke Ninomiya; Shungo Adachi; Tohru Natsume; Junichi Iwakiri; Goro Terai; Kiyoshi Asai; Tetsuro Hirose
Journal:  EMBO J       Date:  2019-11-29       Impact factor: 11.598

Review 4.  Alternative mRNA processing sites decrease genetic variability while increasing functional diversity.

Authors:  Didier Auboeuf
Journal:  Transcription       Date:  2017-11-03

5.  Antimicrobial peptides modulate long-term memory.

Authors:  Raquel Barajas-Azpeleta; Jianping Wu; Jason Gill; Ryan Welte; Chris Seidel; Sean McKinney; Stephane Dissel; Kausik Si
Journal:  PLoS Genet       Date:  2018-10-12       Impact factor: 5.917

6.  O-GlcNAc regulates gene expression by controlling detained intron splicing.

Authors:  Zhi-Wei Tan; George Fei; Joao A Paulo; Stanislav Bellaousov; Sara E S Martin; Damien Y Duveau; Craig J Thomas; Steven P Gygi; Paul L Boutz; Suzanne Walker
Journal:  Nucleic Acids Res       Date:  2020-06-04       Impact factor: 16.971

7.  Alcohol Causes Lasting Differential Transcription in Drosophila Mushroom Body Neurons.

Authors:  Emily Petruccelli; Tariq Brown; Amanda Waterman; Nicolas Ledru; Karla R Kaun
Journal:  Genetics       Date:  2020-03-04       Impact factor: 4.562

Review 8.  The Making of Long-Lasting Memories: A Fruit Fly Perspective.

Authors:  Camilla Roselli; Mani Ramaswami; Tamara Boto; Isaac Cervantes-Sandoval
Journal:  Front Behav Neurosci       Date:  2021-03-30       Impact factor: 3.558

9.  Structural transitions in Orb2 prion-like domain relevant for functional aggregation in memory consolidation.

Authors:  Javier Oroz; Sara S Félix; Eurico J Cabrita; Douglas V Laurents
Journal:  J Biol Chem       Date:  2020-10-22       Impact factor: 5.157

Review 10.  Prion-like proteins: from computational approaches to proteome-wide analysis.

Authors:  Marcos Gil-Garcia; Valentín Iglesias; Irantzu Pallarès; Salvador Ventura
Journal:  FEBS Open Bio       Date:  2021-06-17       Impact factor: 2.693

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