Literature DB >> 28523865

The Interstitial Carbon of the Nitrogenase FeMo Cofactor is Far Better Stabilized than Previously Assumed.

Jörg Grunenberg1.   

Abstract

The first quantum-mechanical calculations of all relevant potential constants in both the iron-molybdenum cofactor and the iron-vanadium cofactor of nitrogenase suggest that the carbide is bound to the center of the enzyme much more strongly than hitherto assumed. Previous studies seemed to indicate a dummy function of the interstitial carbon, with a weak force constant (ca. 0.32 N cm-1 ). Our new investigations confirm a different picture: the central carbon atom binds the iron-sulfur cluster through six covalent C-Fe bonds. With a potential constant of more than 1.3 N cm-1 , the interstitial carbon also appears to be dynamically persistent. According to our investigations, the values for the elasticity within the iron-sulfur cluster have to be corrected too. These new details on the mechano-chemical properties of the FeMo cofactor will be important for elucidating the catalytic cycle of nitrogen fixation. By implementing our new algorithm in the freely available COMPLIANCE program, the dependence on the coordinates during the calculation of Hesse matrices is eliminated completely.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  FeMo cofactor; compliance constants; density functional theory; nitrogenase; relaxed force constants

Mesh:

Substances:

Year:  2017        PMID: 28523865     DOI: 10.1002/anie.201701790

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  9 in total

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Journal:  Chem Rev       Date:  2018-10-30       Impact factor: 60.622

Review 2.  Reduction of Substrates by Nitrogenases.

Authors:  Lance C Seefeldt; Zhi-Yong Yang; Dmitriy A Lukoyanov; Derek F Harris; Dennis R Dean; Simone Raugei; Brian M Hoffman
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3.  Nitrogenase-Relevant Reactivity of a Synthetic Iron-Sulfur-Carbon Site.

Authors:  Amy L Speelman; Ilija Čorić; Casey Van Stappen; Serena DeBeer; Brandon Q Mercado; Patrick L Holland
Journal:  J Am Chem Soc       Date:  2019-08-12       Impact factor: 15.419

4.  Postbiosynthetic modification of a precursor to the nitrogenase iron-molybdenum cofactor.

Authors:  Suppachai Srisantitham; Edward D Badding; Daniel L M Suess
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-08       Impact factor: 11.205

Review 5.  Metal-mediated base pairs in parallel-stranded DNA.

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6.  Nitrogen Reduction to Ammonia on a Biomimetic Mononuclear Iron Centre: Insights into the Nitrogenase Enzyme.

Authors:  Monika A Kaczmarek; Abheek Malhotra; G Alex Balan; Amy Timmins; Sam P de Visser
Journal:  Chemistry       Date:  2017-12-14       Impact factor: 5.236

7.  Carbon Monoxide Binding to the Iron-Molybdenum Cofactor of Nitrogenase: a Detailed Quantum Mechanics/Molecular Mechanics Investigation.

Authors:  Nico Spiller; Ragnar Bjornsson; Serena DeBeer; Frank Neese
Journal:  Inorg Chem       Date:  2021-11-12       Impact factor: 5.165

8.  Four-Coordinate Fe N2 and Imido Complexes Supported by a Hemilabile NNC Heteroscorpionate Ligand.

Authors:  Alex McSkimming; Niklas B Thompson
Journal:  Inorg Chem       Date:  2022-07-27       Impact factor: 5.436

9.  Exploring the Role of the Central Carbide of the Nitrogenase Active-Site FeMo-cofactor through Targeted 13C Labeling and ENDOR Spectroscopy.

Authors:  Ana Pérez-González; Zhi-Yong Yang; Dmitriy A Lukoyanov; Dennis R Dean; Lance C Seefeldt; Brian M Hoffman
Journal:  J Am Chem Soc       Date:  2021-06-10       Impact factor: 16.383

  9 in total

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