Literature DB >> 28520472

A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses.

Artemis S Louyakis1, Jennifer M Mobberley1, Brooke E Vitek2, Pieter T Visscher3, Paul D Hagan2, R Pamela Reid2, Reinhard Kozdon4,5, Ian J Orland5, John W Valley5, Noah J Planavsky6, Giorgio Casaburi1, Jamie S Foster1.   

Abstract

Thrombolites are buildups of carbonate that exhibit a clotted internal structure formed through the interactions of microbial mats and their environment. Despite recent advances, we are only beginning to understand the microbial and molecular processes associated with their formation. In this study, a spatial profile of the microbial and metabolic diversity of thrombolite-forming mats of Highborne Cay, The Bahamas, was generated by using 16S rRNA gene sequencing and predictive metagenomic analyses. These molecular-based approaches were complemented with microelectrode profiling and in situ stable isotope analysis to examine the dominant taxa and metabolic activities within the thrombolite-forming communities. Analyses revealed three distinctive zones within the thrombolite-forming mats that exhibited stratified populations of bacteria and archaea. Predictive metagenomics also revealed vertical profiles of metabolic capabilities, such as photosynthesis and carboxylic and fatty acid synthesis within the mats that had not been previously observed. The carbonate precipitates within the thrombolite-forming mats exhibited isotopic geochemical signatures suggesting that the precipitation within the Bahamian thrombolites is photosynthetically induced. Together, this study provides the first look at the spatial organization of the microbial populations within Bahamian thrombolites and enables the distribution of microbes to be correlated with their activities within modern thrombolite systems. Key Words: Thrombolites-Microbial diversity-Metagenome-Stable isotopes-Microbialites. Astrobiology 17, 413-430.

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Year:  2017        PMID: 28520472      PMCID: PMC5767104          DOI: 10.1089/ast.2016.1563

Source DB:  PubMed          Journal:  Astrobiology        ISSN: 1557-8070            Impact factor:   4.335


  61 in total

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3.  Comparative microbial diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing.

Authors:  Jennifer M Mobberley; Maya C Ortega; Jamie S Foster
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Journal:  Geobiology       Date:  2014-03-17       Impact factor: 4.407

6.  Mineralogy and Microbial Diversity of the Microbialites in the Hypersaline Storr's Lake, the Bahamas.

Authors:  Varun G Paul; David J Wronkiewicz; Melanie R Mormile; Jamie S Foster
Journal:  Astrobiology       Date:  2016-04       Impact factor: 4.335

7.  Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeri.

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Authors:  Richard Allen White; Amy M Chan; Gregory S Gavelis; Brian S Leander; Allyson L Brady; Gregory F Slater; Darlene S S Lim; Curtis A Suttle
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9.  New multi-scale perspectives on the stromatolites of Shark Bay, Western Australia.

Authors:  E P Suosaari; R P Reid; P E Playford; J S Foster; J F Stolz; G Casaburi; P D Hagan; V Chirayath; I G Macintyre; N J Planavsky; G P Eberli
Journal:  Sci Rep       Date:  2016-02-03       Impact factor: 4.379

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Authors:  Hon Lun Wong; Daniela-Lee Smith; Pieter T Visscher; Brendan P Burns
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2.  Prokaryotic diversity and biogeochemical characteristics of field living and laboratory cultured stromatolites from the hypersaline Laguna Interna, Salar de Atacama (Chile).

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5.  Comparative Metagenomics Provides Insight Into the Ecosystem Functioning of the Shark Bay Stromatolites, Western Australia.

Authors:  Joany Babilonia; Ana Conesa; Giorgio Casaburi; Cecile Pereira; Artemis S Louyakis; R Pamela Reid; Jamie S Foster
Journal:  Front Microbiol       Date:  2018-06-25       Impact factor: 5.640

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