| Literature DB >> 28512336 |
Wang Li1,2, Hongying Liu3,4, Dandan Xie1, Zichun He5, Xititan Pi6,7.
Abstract
In recent years, electronic nose (e-nose) systems have become a focus method for diagnosing pulmonary diseases such as lung cancer. However, principles and patterns of sensor responses in traditional e-nose systems are relatively homogeneous. Less study has been focused on type-different sensor arrays. In this paper, we designed a miniature e-nose system using 14 gas sensors of four types and its subsequent analysis of 52 breath samples. To investigate the performance of this system in identifying and distinguishing lung cancer from other respiratory diseases and healthy controls, five feature extraction algorithms and two classifiers were adopted. Lastly, the influence of type-different sensors on the identification ability of e-nose systems was analyzed. Results indicate that when using the LDA fuzzy 5-NN classification method, the sensitivity, specificity and accuracy of discriminating lung cancer patients from healthy controls with e-nose systems are 91.58%, 91.72% and 91.59%, respectively. Our findings also suggest that type-different sensors could significantly increase the diagnostic accuracy of e-nose systems. These results showed e-nose system proposed in this study was potentially practicable in lung cancer screening with a favorable performance. In addition, it is important for type-different sensors to be considered when developing e-nose systems.Entities:
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Year: 2017 PMID: 28512336 PMCID: PMC5434050 DOI: 10.1038/s41598-017-02154-9
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
VOCs in human breath.
| Sample | Potential application | References |
|---|---|---|
| Carbon monoxide | Marker of neonatal jaundice |
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| Hydrogen and methane | Gastrointestinal diagnoses |
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| Nitric oxide | Monitoring asthma therapy and COPD |
|
| Ethanol | Potential indicator of nonalcoholic steatohepatitis, drunk driving test (law enforcement) |
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| Pentane | Marker of acute asthma, |
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| Acetone | Monitoring pneumonia and diagnosing Ketosis, diabetes, |
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| Hydrogen sulfide | Periodontal disease |
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| Decane, 4-methy-octane, undecane, aldehydes, benzene and its derivatives, 1-butanol | Markers of |
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| Methyl-mercaptan | Markers of Hepatic coma |
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| Naphthalene, 1-methyl- and cyclohexane, 1,4-dimethyl- | Markers of pulmonary tuberculosis |
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| Isoprene | Markers of advanced fibrosis in chronic liver disease and cholesterologenesis |
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| Carbonyl sulfide | Biomarkers of human liver disease and lung transplant recipients with acute rejection |
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| Carbon disulfide, pentane | Potential Markers of schizophrenia |
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| Ammonia | Diagnosing chronic kidney disease, renal failure, hepatic encephalopathy, etc. |
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Sensors used in this study.
| No. | Model | Type | Range (ppm) | Detectable gases | Manufacturer |
|---|---|---|---|---|---|
| 1 | TGS2620 | Metal oxide semiconductor | 50–5000 | Ethanol, hydrogen, butane, etc. | FIGARO |
| 2 | TGS2602 | Metal oxide semiconductor | 1–30 | Toluene, hydrogen sulfide, ethanol, etc. | FIGARO |
| 3 | TGS2600 | Metal oxide semiconductor | 1–30 | Hydrogen, ethanol, butane, etc. | FIGARO |
| 4 | TGS826 | Metal oxide semiconductor | 30–300 | Ethanol, ammonia, hydrogen, etc. | FIGARO |
| 5 | TGS822 | Metal oxide semiconductor | 50–5000 | Acetone, ethanol, benzene, etc. | FIGARO |
| 6 | TGS2444 | Metal oxide semiconductor | 10–300 | Ammonia, hydrogen sulfide, ethanol, etc. | FIGARO |
| 7 | TGS8669 | Metal oxide semiconductor | 1–500 | Acetone, benzene, toluene, etc. | FIGARO |
| 8 | WSP2110 | Metal oxide semiconductor | 1–50 | Benzene, toluene, ethanol, etc. | Winsen |
| 9 | NAP-55A | catalytic combustion type gas sensor | 500–5000 | Combustible gases | NEMOTO |
| 10 | MR516 | Hot-wire Gas Sensor | 0–500 | Formaldehyde and other VOCs | Winsen |
| 11 | ME3-C7H8 | Electrochemical gas sensor | 0–500 | Toluene, xylene, Hydrogen sulfide, etc. | Winsen |
| 12 | ME4-C6H6 | Electrochemical gas sensor | 0–100 | Benzene, xylene, toluene, etc. | Winsen |
| 13 | ME4-H2S | Electrochemical gas sensor | 0–100 | Hydrogen sulfide, hydrogen phosphide, formaldehyde, etc. | Winsen |
| 14 | CO-B4 | Electrochemical gas sensor | 0–50 | Carbon monoxide | Alphasense |
Figure 1The photo of the designed E-nose system.
Figure 2Overview of the breath sampling and analysis system. (a) Tedlar® bag for breath sampling. (b) Photograph of the E-nose system and software interface. (c) Block diagram of the system.
Confusion matrix obtained from classifier.
| Predicted results | |||
|---|---|---|---|
| Positive | Negative | ||
| Real results | Positive | TP | FN |
| Negative | FP | TN | |
Figure 3Typical response curves of the sensor arrays. (a) Response curves of the sensor arrays before preprocess. (b) Response curves of the sensor arrays after preprocess.
Figure 4Mapping results of 5 algorithms (2D). (a) Represents the 2D mapping plot of PCA, (b) is the 2D mapping result of LDA with 4 classes of labels, c is the 2D mapping plot of LE, (d) is the 2D mapping plot of LLE, (e) is the 2D mapping result of tSNE, and (f) is the 2D mapping results of LDA with 3 classes of labels. Green dots represent samples from healthy non-smokers, blue dots represent samples from healthy smokers, red hexagrams represent samples from lung cancer patients, and light blue diamonds represent other disease samples.
Figure 5Optimization of Fuzzy k-NN algorithm parameters (k, m).
Figure 6Contour map of PCA-SVM parameter (C, σ) optimizing. The arrow is pointing at the optimal parameter by cross validation of the grid optimization.
Distinguishing results of lung cancer samples and healthy samples by different classification methods.
| Classifier | Sensitivity[95% CI] | Specificity[95% CI] | Accuracy[95% CI] |
|---|---|---|---|
| LDA-Fuzzy |
|
|
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| LE-Fuzzy | 57.22% [55.7%, 58.75%] | 56.14% [53.82%, 58.46%] | 56.63% [55.18%, 58.08%] |
| PCA-Fuzzy | 86.25% [84.71%, 87.79%] | 56.76% [55.11%, 58.42%] | 71.81% [70.6%, 73.02%] |
| LDA-SVM | 90.83% [88.99%, 92.68%] | 84.20% [81.42%, 86.98%] | 87.59% [86.2%, 88.97%] |
| LE-SVM | 64.58% [61.82%, 67.35%] | 55.07% [52.57%, 57.57%] | 59.93% [58.35%, 61.51%] |
| PCA-SVM | 57.64% [51.56%, 63.71%] | 23.62% [20.39%, 26.86%] | 40.99% [37.58%, 44.41%] |
Sensors grouping.
| Group K | Group T | ||
|---|---|---|---|
| Model | Type | Model | Type |
| ME3-C7H8 | Electrochemical | TGS822 | Metal oxide semiconductor |
| ME4-C6H6 | Electrochemical | TGS826 | Metal oxide semiconductor |
| CO-B4 | Electrochemical | TGS8669 | Metal oxide semiconductor |
| MR516 | Hot wire | TGS2600 | Metal oxide semiconductor |
| TGS2444 | Metal oxide semiconductor | TGS2602 | Metal oxide semiconductor |
| WSP2110 | Metal oxide semiconductor | TGS2620 | Metal oxide semiconductor |
| NAP-55A | Catalytic combustion | WSP2110 | Metal oxide semiconductor |
Figure 7Mapping results of PCA, LDA and LE using data from sensor group T and group K. (a,c,e) are 2D mapping plots of PCA, LDA and LE based on data obtained by sensor group K; (b,d,f) are 2D mapping plots of PCA, LDA, and LE based on data obtained by sensors of group T.
Figure 8Accuracy of 3 classification methods based on the data from sensor group K and sensor group T. (a) Comparison of classification accuracy using LDA 5-NN based on data from sensor groups K and T; (b) Comparison of classification accuracy using PCA 5-NN based on data from sensor groups K and T; (c) Comparison of classification accuracy using LE 5-NN based on data from sensor groups K and T. ***indicates significance: p < 0.01.