Literature DB >> 28510094

The use of biophysical proteomic techniques in advancing our understanding of diseases.

Qian Xu1, Ziyou Cui1, Gayathi Venkatraman1, Aldrin V Gomes2.   

Abstract

The use of proteomic approaches in investigating diseases is continuing to expand and has started to provide answers to substantial gaps in our understanding of disease pathogenesis as well as in the development of effective strategies for the early diagnosis and treatment of diseases. Biophysical techniques form a crucial part of the advanced proteomic techniques currently used and include mass spectrometry and protein separation techniques, such as two-dimensional gel electrophoresis and liquid chromatography. The application of biophysical proteomic techniques in the study of disease includes delineation of altered protein expression, not only at the whole-cell or tissue levels, but also in subcellular structures, protein complexes, and biological fluids. These techniques are also being used for the discovery of novel disease biomarkers, exploration of the pathogenesis of diseases, development of new diagnostic methodologies, and identification of new targets for therapeutics. Proteomic techniques also have the potential for accelerating drug development through more effective strategies for evaluating a specific drug's therapeutic effects and toxicity. This article discusses the application of biophysical proteomic techniques in delineating cardiovascular disease and other diseases, as well as the limitations and future research directions required for these techniques to gain greater acceptance and have a larger impact.

Entities:  

Keywords:  Biophysical techniques; Diseases; Gel electrophoresis; Liquid chromatography; Mass spectrometry; Proteomics

Year:  2012        PMID: 28510094      PMCID: PMC5418381          DOI: 10.1007/s12551-012-0070-2

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  70 in total

Review 1.  Proteomics technologies for the global identification and quantification of proteins.

Authors:  Ian A Brewis; P Brennan
Journal:  Adv Protein Chem Struct Biol       Date:  2010       Impact factor: 3.507

Review 2.  Recent advances in enhancing the sensitivity of electrophoresis and electrochromatography in capillaries and microchips (2008-2010).

Authors:  Michael C Breadmore; Mohamed Dawod; Joselito P Quirino
Journal:  Electrophoresis       Date:  2010-11-25       Impact factor: 3.535

3.  Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF.

Authors:  Wells W Wu; Guanghui Wang; Seung Joon Baek; Rong-Fong Shen
Journal:  J Proteome Res       Date:  2006-03       Impact factor: 4.466

Review 4.  Proteomics by mass spectrometry: approaches, advances, and applications.

Authors:  John R Yates; Cristian I Ruse; Aleksey Nakorchevsky
Journal:  Annu Rev Biomed Eng       Date:  2009       Impact factor: 9.590

Review 5.  Electron transfer dissociation of modified peptides and proteins.

Authors:  Yuping Zhou; Jia Dong; Richard W Vachet
Journal:  Curr Pharm Biotechnol       Date:  2011-10       Impact factor: 2.837

6.  In situ, real-time identification of biological tissues by ultraviolet and infrared laser desorption ionization mass spectrometry.

Authors:  Karl-Christian Sächfer; Tamás Szaniszló; Sabine Günther; Júlia Balog; Júlia Dénes; Márta Keseru; Balázs Dezso; Miklós Tóth; Bernhard Spengler; Zoltán Takáts
Journal:  Anal Chem       Date:  2011-02-08       Impact factor: 6.986

7.  Molecular analysis of tumor margins by MALDI mass spectrometry in renal carcinoma.

Authors:  Stacey R Oppenheimer; Deming Mi; Melinda E Sanders; Richard M Caprioli
Journal:  J Proteome Res       Date:  2010-05-07       Impact factor: 4.466

8.  A pipeline that integrates the discovery and verification of plasma protein biomarkers reveals candidate markers for cardiovascular disease.

Authors:  Terri A Addona; Xu Shi; Hasmik Keshishian; D R Mani; Michael Burgess; Michael A Gillette; Karl R Clauser; Dongxiao Shen; Gregory D Lewis; Laurie A Farrell; Michael A Fifer; Marc S Sabatine; Robert E Gerszten; Steven A Carr
Journal:  Nat Biotechnol       Date:  2011-06-19       Impact factor: 54.908

9.  Analysis of phosphorylation sites on proteins from Saccharomyces cerevisiae by electron transfer dissociation (ETD) mass spectrometry.

Authors:  An Chi; Curtis Huttenhower; Lewis Y Geer; Joshua J Coon; John E P Syka; Dina L Bai; Jeffrey Shabanowitz; Daniel J Burke; Olga G Troyanskaya; Donald F Hunt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-07       Impact factor: 11.205

10.  Enrichment and site mapping of O-linked N-acetylglucosamine by a combination of chemical/enzymatic tagging, photochemical cleavage, and electron transfer dissociation mass spectrometry.

Authors:  Zihao Wang; Namrata D Udeshi; Meaghan O'Malley; Jeffrey Shabanowitz; Donald F Hunt; Gerald W Hart
Journal:  Mol Cell Proteomics       Date:  2009-08-19       Impact factor: 5.911

View more
  1 in total

Review 1.  Diagnostic and prognostic tests in systemic lupus erythematosus.

Authors:  Natalia Vasquez-Canizares; Dawn Wahezi; Chaim Putterman
Journal:  Best Pract Res Clin Rheumatol       Date:  2017-11-06       Impact factor: 4.098

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.