Literature DB >> 28510018

A Hilly path through the thermodynamics and statistical mechanics of protein solutions.

Peter R Wills1.   

Abstract

The opus of Don Winzor in the fields of physical and analytical biochemistry is a major component of that certain antipodean approach to this broad area of research that blossomed in the second half of the twentieth century. The need to formulate problems in terms of thermodynamic nonideality posed the challenge of describing a clear route from molecular interactions to the parameters that biochemists routinely measure. Mapping out this route required delving into the statistical mechanics of solutions of macromolecules, and at every turn mathematically complex, rigorous, general results that had previously been derived previously, often by Terrell Hill, came to the fore. Central to this work were the definition of the "thermodynamic activity", the pivotal position of the polynomial expansion of the osmotic pressure in terms of molar concentration and the relationship of virial coefficients to details of the forces between limited-size groups of interacting molecules. All of this was richly exploited in the task of taking account of excluded volume and electrostatic interactions, especially in the use of sedimentation equilibrium to determine values of constants for molecular association reactions. Such an approach has proved relevant to the study of molecular interactions generally, even those between the main macromolecular solute and components of the solvent, by using techniques such as exclusion and affinity chromatography as well as light scattering.

Keywords:  Excluded volume; Molecular association reaction; Nonideality; Osmotic virial coefficient; Sedimentation equilibrium; Thermodynamic activity

Year:  2016        PMID: 28510018      PMCID: PMC5425806          DOI: 10.1007/s12551-016-0226-6

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  28 in total

1.  Allowance for the effect of protein charge in the characterization of nonideal solute self-association by sedimentation equilibrium.

Authors:  David J Scott; Peter R Wills; Donald J Winzor
Journal:  Biophys Chem       Date:  2010-05-04       Impact factor: 2.352

2.  van der Waals phase transition in protein solutions.

Authors:  Peter R Wills; Donald J Winzor
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-05-26

3.  Direct allowance for the effects of thermodynamic nonideality in the quantitative characterization of protein self-association by osmometry.

Authors:  Peter R Wills; Donald J Winzor
Journal:  Biophys Chem       Date:  2009-09-11       Impact factor: 2.352

4.  Scrapie, ribosomal proteins and biological information.

Authors:  P R Wills
Journal:  J Theor Biol       Date:  1986-09-21       Impact factor: 2.691

5.  Measurement of thermodynamic nonideality arising from volume-exclusion interactions between proteins and polymers.

Authors:  P R Wills; Y Georgalis; J Dijk; D J Winzor
Journal:  Biophys Chem       Date:  1995-12       Impact factor: 2.352

6.  The indefinite self-association of lysozyme: consideration of composition-dependent activity coefficients.

Authors:  P R Wills; L W Nichol; R J Siezen
Journal:  Biophys Chem       Date:  1980-02       Impact factor: 2.352

7.  Molecular crowding effects of linear polymers in protein solutions.

Authors:  Donald J Winzor; Peter R Wills
Journal:  Biophys Chem       Date:  2005-08-29       Impact factor: 2.352

8.  Biophysical analysis of a lethal laminin alpha-1 mutation reveals altered self-interaction.

Authors:  Trushar R Patel; Denise Nikodemus; Tabot M D Besong; Raphael Reuten; Markus Meier; Stephen E Harding; Donald J Winzor; Manuel Koch; Jörg Stetefeld
Journal:  Matrix Biol       Date:  2015-07-26       Impact factor: 11.583

9.  Enthalpy/entropy compensation effects from cavity desolvation underpin broad ligand binding selectivity for rat odorant binding protein 3.

Authors:  Katherine L Portman; Jed Long; Stephen Carr; Loïc Briand; Donald J Winzor; Mark S Searle; David J Scott
Journal:  Biochemistry       Date:  2014-04-07       Impact factor: 3.162

10.  Nonequivalence of second virial coefficients from sedimentation equilibrium and static light scattering studies of protein solutions.

Authors:  Donald J Winzor; Marcin Deszczynski; Stephen E Harding; Peter R Wills
Journal:  Biophys Chem       Date:  2007-03-07       Impact factor: 2.352

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  3 in total

1.  A review and summary of the contents of biophysical reviews volume 8, 2016.

Authors:  Cris Dos Remedios
Journal:  Biophys Rev       Date:  2017-02-07

Review 2.  Foreword to 'Quantitative and analytical relations in biochemistry'-a special issue in honour of Donald J. Winzor's 80th birthday.

Authors:  Damien Hall; Stephen E Harding
Journal:  Biophys Rev       Date:  2016-11-04

3.  Global multi-method analysis of interaction parameters for reversibly self-associating macromolecules at high concentrations.

Authors:  Arun Parupudi; Sumit K Chaturvedi; Regina Adão; Robert W Harkness; Sonia Dragulin-Otto; Lewis E Kay; Reza Esfandiary; Huaying Zhao; Peter Schuck
Journal:  Sci Rep       Date:  2021-03-11       Impact factor: 4.996

  3 in total

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