Literature DB >> 28510011

Dynamic light scattering: a practical guide and applications in biomedical sciences.

Jörg Stetefeld1,2, Sean A McKenna3,4, Trushar R Patel5,6.   

Abstract

Dynamic light scattering (DLS), also known as photon correlation spectroscopy (PCS), is a very powerful tool for studying the diffusion behaviour of macromolecules in solution. The diffusion coefficient, and hence the hydrodynamic radii calculated from it, depends on the size and shape of macromolecules. In this review, we provide evidence of the usefulness of DLS to study the homogeneity of proteins, nucleic acids, and complexes of protein-protein or protein-nucleic acid preparations, as well as to study protein-small molecule interactions. Further, we provide examples of DLS's application both as a complementary method to analytical ultracentrifugation studies and as a screening tool to validate solution scattering models using determined hydrodynamic radii.

Keywords:  Analytical ultracentrifuge; Diffusion coefficient; Dynamic light scattering; Hydrodynamic radius; Light scattering; Protein–ligand interactions; Protein–nucleic acid complexes; Protein–protein complexes

Year:  2016        PMID: 28510011      PMCID: PMC5425802          DOI: 10.1007/s12551-016-0218-6

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  52 in total

1.  Alpha3Na+/K+-ATPase is a neuronal receptor for agrin.

Authors:  Lutz G W Hilgenberg; Hailing Su; Huaiyu Gu; Diane K O'Dowd; Martin A Smith
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

2.  LAMC1 gene is associated with premature ovarian failure.

Authors:  Jung-A Pyun; Dong Hyun Cha; KyuBum Kwack
Journal:  Maturitas       Date:  2012-02-10       Impact factor: 4.342

3.  Localization of a major nidogen-binding site to domain III of laminin B2 chain.

Authors:  M Gerl; K Mann; M Aumailley; R Timpl
Journal:  Eur J Biochem       Date:  1991-11-15

4.  Protein analysis by dynamic light scattering: methods and techniques for students.

Authors:  Bernard Lorber; Frédéric Fischer; Marc Bailly; Hervé Roy; Daniel Kern
Journal:  Biochem Mol Biol Educ       Date:  2012-10-10       Impact factor: 1.160

Review 5.  Quasi-elastic laser light scattering.

Authors:  V A Bloomfield; T K Lim
Journal:  Methods Enzymol       Date:  1978       Impact factor: 1.600

Review 6.  Physical characterization of the protein molecule.

Authors:  K E Van Holde
Journal:  Mol Biol Biochem Biophys       Date:  1970

7.  Quasi-elastic light scattering by diffusional fluctuations in RNase solutions.

Authors:  L Rimai; J T Hichmott; E B Carew; T Cole
Journal:  Biophys J       Date:  1970-01       Impact factor: 4.033

Review 8.  Quasi-elastic light scattering applications in biochemistry and biology.

Authors:  V A Bloomfield
Journal:  Annu Rev Biophys Bioeng       Date:  1981

9.  Quasi-elastic light scattering of Artemia ribosomes sedimented in a CsCl density gradient.

Authors:  P Nieuwenhuysen; J Clauwaert
Journal:  J Biochem Biophys Methods       Date:  1981-12

10.  Identification of agrin, a synaptic organizing protein from Torpedo electric organ.

Authors:  R M Nitkin; M A Smith; C Magill; J R Fallon; Y M Yao; B G Wallace; U J McMahan
Journal:  J Cell Biol       Date:  1987-12       Impact factor: 10.539

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  193 in total

1.  Protective effect of fungal extracellular vesicles against murine candidiasis.

Authors:  Gabriele Vargas; Leandro Honorato; Allan Jefferson Guimarães; Marcio L Rodrigues; Flavia C G Reis; André M Vale; Anjana Ray; Joshua Daniel Nosanchuk; Leonardo Nimrichter
Journal:  Cell Microbiol       Date:  2020-07-22       Impact factor: 3.715

2.  Thermal stability analyses of human PERIOD-2 C-terminal domain using dynamic light scattering and circular dichroism.

Authors:  Yuejiao Xian; Brenda Moreno; Victoria Miranda; Neha Vijay; Luis C Nunez; Jennie Choi; Christian S Quinones; Paulina Rios; Neha Chauhan; Karla V Moriel; Noah J Ruelas; Adan E Castaneda; Ruben Cano Rodriguez; Bianca N Amezaga; Seham Z Azzam; Chuan Xiao
Journal:  PLoS One       Date:  2020-04-22       Impact factor: 3.240

3.  ITC for Characterization of Self-Assembly Process of Cationic Dendrons for siRNA Delivery.

Authors:  Erik Laurini; Suzana Aulic; Natasa Skoko; Domenico Marson; Maurizio Fermeglia; Sabrina Pricl
Journal:  Methods Mol Biol       Date:  2021

4.  A review and summary of the contents of biophysical reviews volume 8, 2016.

Authors:  Cris Dos Remedios
Journal:  Biophys Rev       Date:  2017-02-07

Review 5.  Foreword to 'Quantitative and analytical relations in biochemistry'-a special issue in honour of Donald J. Winzor's 80th birthday.

Authors:  Damien Hall; Stephen E Harding
Journal:  Biophys Rev       Date:  2016-11-04

6.  Disassembly of the ring-type decameric structure of peroxiredoxin from Aeropyrum pernix K1 by amino acid mutation.

Authors:  Tomoki Himiyama; Tsutomu Nakamura
Journal:  Protein Sci       Date:  2020-02-12       Impact factor: 6.725

7.  Solution Structure of C. elegans UNC-6: A Nematode Paralogue of the Axon Guidance Protein Netrin-1.

Authors:  Natalie Krahn; Markus Meier; Raphael Reuten; Manuel Koch; Joerg Stetefeld; Trushar R Patel
Journal:  Biophys J       Date:  2019-05-03       Impact factor: 4.033

Review 8.  Analytical ultracentrifuge: an ideal tool for characterization of non-coding RNAs.

Authors:  Maulik D Badmalia; M Quadir Siddiqui; Tyler Mrozowich; Darren L Gemmill; Trushar R Patel
Journal:  Eur Biophys J       Date:  2020-10-16       Impact factor: 1.733

9.  Cationic Dendrimers for siRNA Delivery: An Overview of Methods for In Vitro/In Vivo Characterization.

Authors:  Erik Laurini; Suzana Aulic; Domenico Marson; Maurizio Fermeglia; Sabrina Pricl
Journal:  Methods Mol Biol       Date:  2021

10.  Visualizing the functional 3D shape and topography of long noncoding RNAs by single-particle atomic force microscopy and in-solution hydrodynamic techniques.

Authors:  Tina Uroda; Isabel Chillón; Paolo Annibale; Jean-Marie Teulon; Ombeline Pessey; Manikandan Karuppasamy; Jean-Luc Pellequer; Marco Marcia
Journal:  Nat Protoc       Date:  2020-05-25       Impact factor: 13.491

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