Literature DB >> 32320392

Thermal stability analyses of human PERIOD-2 C-terminal domain using dynamic light scattering and circular dichroism.

Yuejiao Xian1, Brenda Moreno1, Victoria Miranda1, Neha Vijay1, Luis C Nunez1, Jennie Choi1, Christian S Quinones1, Paulina Rios1, Neha Chauhan1, Karla V Moriel1, Noah J Ruelas1, Adan E Castaneda1, Ruben Cano Rodriguez1, Bianca N Amezaga1, Seham Z Azzam1, Chuan Xiao1.   

Abstract

At the molecular level, the circadian clock is regulated by a time delayed transcriptional-translational feedback loop in which the core proteins interact with each other rhythmically to drive daily biological rhythms. The C-terminal domain of a key clock protein PER2 (PER2c) plays a critically important role in the loop, not only for its interaction with the binding partner CRY proteins but also for the CRY/PER complex's translocation from the cytosol to the nucleus. Previous circular dichroism (CD) spectroscopic studies have shown that mouse PER2c (mPER2c) is less structured in solution by itself but folded into stable secondary structures upon interaction with mouse CRYs. To understand the stability and folding of human PER2c (hPER2c), we expressed and purified hPER2c. Three oligomerization forms of recombinant hPER2c were identified and thoroughly characterized through a combination of biochemical and biophysical techniques. Different to mPER2c, both thermal unfolding DLS and CD analyses suggested that all forms of hPER2c have very stable secondary structures in solution by themselves with melting temperatures higher than the physiological body temperature, indicating that hPER2c does not require CRY to fold. Furthermore, we examined the effects of EDTA, salt concentration, and a reducing agent on hPER2c folding and oligomerization. The ability of hPER2c forming oligomers reflects the potential role of hPER2c in the assembly of circadian rhythm core protein complexes.

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Year:  2020        PMID: 32320392      PMCID: PMC7176140          DOI: 10.1371/journal.pone.0221180

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  41 in total

Review 1.  How to study proteins by circular dichroism.

Authors:  Sharon M Kelly; Thomas J Jess; Nicholas C Price
Journal:  Biochim Biophys Acta       Date:  2005-08-10

2.  Interaction of circadian clock proteins CRY1 and PER2 is modulated by zinc binding and disulfide bond formation.

Authors:  Ira Schmalen; Silke Reischl; Thomas Wallach; Roman Klemz; Astrid Grudziecki; J Rajan Prabu; Christian Benda; Achim Kramer; Eva Wolf
Journal:  Cell       Date:  2014-05-22       Impact factor: 41.582

3.  An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome.

Authors:  K L Toh; C R Jones; Y He; E J Eide; W A Hinz; D M Virshup; L J Ptácek; Y H Fu
Journal:  Science       Date:  2001-02-09       Impact factor: 47.728

4.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

Authors:  W Kabsch; C Sander
Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

5.  Control of mammalian circadian rhythm by CKIepsilon-regulated proteasome-mediated PER2 degradation.

Authors:  Erik J Eide; Margaret F Woolf; Heeseog Kang; Peter Woolf; William Hurst; Fernando Camacho; Erica L Vielhaber; Andrew Giovanni; David M Virshup
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

6.  The circadian gene Period2 plays an important role in tumor suppression and DNA damage response in vivo.

Authors:  Loning Fu; Helene Pelicano; Jinsong Liu; Peng Huang; Cheng Lee
Journal:  Cell       Date:  2002-10-04       Impact factor: 41.582

7.  The circadian regulatory proteins BMAL1 and cryptochromes are substrates of casein kinase Iepsilon.

Authors:  Erik J Eide; Erica L Vielhaber; William A Hinz; David M Virshup
Journal:  J Biol Chem       Date:  2002-03-01       Impact factor: 5.157

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  IBS: an illustrator for the presentation and visualization of biological sequences.

Authors:  Wenzhong Liu; Yubin Xie; Jiyong Ma; Xiaotong Luo; Peng Nie; Zhixiang Zuo; Urs Lahrmann; Qi Zhao; Yueyuan Zheng; Yong Zhao; Yu Xue; Jian Ren
Journal:  Bioinformatics       Date:  2015-06-10       Impact factor: 6.937

Review 10.  Central and peripheral circadian clocks in mammals.

Authors:  Jennifer A Mohawk; Carla B Green; Joseph S Takahashi
Journal:  Annu Rev Neurosci       Date:  2012-04-05       Impact factor: 12.449

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