Literature DB >> 28506890

Biomechanics of the transport barrier in the nuclear pore complex.

George J Stanley1, Ariberto Fassati2, Bart W Hoogenboom3.   

Abstract

The nuclear pore complex (NPC) is the selective gateway through which all molecules must pass when entering or exiting the nucleus. It is a cog in the gene expression pathway, an entrance to the nucleus exploited by viruses, and a highly-tuned nanoscale filter. The NPC is a large proteinaceous assembly with a central lumen occluded by natively disordered proteins, known as FG-nucleoporins (or FG-nups). These FG-nups, along with a family of soluble proteins known as nuclear transport receptors (NTRs), form the selective transport barrier. Although much is known about the transport cycle and the necessity of NTRs for chaperoning cargo molecules through the NPC, the mechanism by which NTRs and NTR•cargo complexes translocate the selective transport barrier is not well understood. How can disordered FG-nups and soluble NTRs form a transport barrier that is selective, ATP-free, and fast? In this work, we review various mechanical approaches - both experimental and theoretical/computational - employed to better understand the morphology of the FG-nups, and their role in nucleocytoplasmic transport. Recent experiments on FG-nups tethered to planar surfaces, coupled with quantitative modelling work suggests that FG-nup morphologies are the result of a finely balanced system with significant contributions from FG-nup cohesiveness and entropic repulsion, and from NTR•FG-nup binding avidity; whilst AFM experiments on intact NPCs suggest that the FG-nups are sufficiently cohesive to form condensates in the centre of the NPC lumen, which may transiently dissolve to facilitate the transport of larger cargoes.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Biomechanics; FG-nups; Nuclear pore complex; Nucleocytoplasmic traffic; Polymer physics

Mesh:

Substances:

Year:  2017        PMID: 28506890     DOI: 10.1016/j.semcdb.2017.05.007

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  15 in total

1.  Integrative structure and functional anatomy of a nuclear pore complex.

Authors:  Seung Joong Kim; Javier Fernandez-Martinez; Ilona Nudelman; Yi Shi; Wenzhu Zhang; Barak Raveh; Thurston Herricks; Brian D Slaughter; Joanna A Hogan; Paula Upla; Ilan E Chemmama; Riccardo Pellarin; Ignacia Echeverria; Manjunatha Shivaraju; Azraa S Chaudhury; Junjie Wang; Rosemary Williams; Jay R Unruh; Charles H Greenberg; Erica Y Jacobs; Zhiheng Yu; M Jason de la Cruz; Roxana Mironska; David L Stokes; John D Aitchison; Martin F Jarrold; Jennifer L Gerton; Steven J Ludtke; Christopher W Akey; Brian T Chait; Andrej Sali; Michael P Rout
Journal:  Nature       Date:  2018-03-14       Impact factor: 49.962

Review 2.  Viscoelasticity, Like Forces, Plays a Role in Mechanotransduction.

Authors:  Claudia Tanja Mierke
Journal:  Front Cell Dev Biol       Date:  2022-02-09

3.  Crowding-induced phase separation of nuclear transport receptors in FG nucleoporin assemblies.

Authors:  Luke K Davis; Ian J Ford; Bart W Hoogenboom
Journal:  Elife       Date:  2022-01-31       Impact factor: 8.140

4.  Physics of the Nuclear Pore Complex: Theory, Modeling and Experiment.

Authors:  Bart W Hoogenboom; Loren E Hough; Edward A Lemke; Roderick Y H Lim; Patrick R Onck; Anton Zilman
Journal:  Phys Rep       Date:  2021-03-24       Impact factor: 30.510

5.  Molecular interactions of FG nucleoporin repeats at high resolution.

Authors:  Alain Ibáñez de Opakua; James A Geraets; Benedikt Frieg; Christian Dienemann; Adriana Savastano; Marija Rankovic; Maria-Sol Cima-Omori; Gunnar F Schröder; Markus Zweckstetter
Journal:  Nat Chem       Date:  2022-09-22       Impact factor: 24.274

6.  Physical modeling of multivalent interactions in the nuclear pore complex.

Authors:  Luke K Davis; Anđela Šarić; Bart W Hoogenboom; Anton Zilman
Journal:  Biophys J       Date:  2021-02-20       Impact factor: 4.033

7.  Carbon nanotubes as molecular transporters to study a new mechanism for molecular entry into the cell nucleus using actin polymerization force.

Authors:  Shaghayegh Sadr Karimi; Nelly Pante
Journal:  PLoS One       Date:  2019-08-22       Impact factor: 3.240

Review 8.  The Role of Capsid in the Early Steps of HIV-1 Infection: New Insights into the Core of the Matter.

Authors:  Nawal AlBurtamani; Alwin Paul; Ariberto Fassati
Journal:  Viruses       Date:  2021-06-17       Impact factor: 5.048

9.  Atomic force microscopy reveals structural variability amongst nuclear pore complexes.

Authors:  George J Stanley; Ariberto Fassati; Bart W Hoogenboom
Journal:  Life Sci Alliance       Date:  2018-08-20

Review 10.  Mechanisms of nuclear pore complex assembly - two different ways of building one molecular machine.

Authors:  Shotaro Otsuka; Jan Ellenberg
Journal:  FEBS Lett       Date:  2017-11-22       Impact factor: 4.124

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.