Literature DB >> 28505444

Explicit Incorporation of Hard and Soft Protein-Protein Interactions into Models for Crowding Effects in Protein Mixtures. 2. Effects of Varying Hard and Soft Interactions upon Prototypical Chemical Equilibria.

Allen P Minton1.   

Abstract

Previously derived approximate analytical relations for the activity coefficient of each solute in a mixture of up to three spherical solutes in a highly nonideal solution interacting via square well potentials of mean force (Hoppe, T.; Minton, A. P. J Phys Chem B. 2016, 120, 11866-11872) were used to explore the effect of heterogeneity in volume occupancy and intermolecular interactions upon prototypical schemes representing solubility, partitioning, conformational isomerization, and self-association in crowded solutions. Results generally indicate that all of the equilibria explored are exquisitely sensitive to variations in both volume occupancy and intermolecular interaction and have important implications for the design and execution of more detailed simulations of complex media.

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Year:  2017        PMID: 28505444      PMCID: PMC6547360          DOI: 10.1021/acs.jpcb.7b02378

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

Review 1.  Towards developing principles of protein folding and dynamics in the cell.

Authors:  Margaret S Cheung; Andrei G Gasic
Journal:  Phys Biol       Date:  2018-07-30       Impact factor: 2.583

Review 2.  Water Loss in Aging Erythrocytes Provides a Clue to a General Mechanism of Cellular Senescence.

Authors:  Allen P Minton
Journal:  Biophys J       Date:  2020-10-15       Impact factor: 4.033

Review 3.  Molecular simulations of cellular processes.

Authors:  Fabio Trovato; Giordano Fumagalli
Journal:  Biophys Rev       Date:  2017-11-28

Review 4.  Toward an understanding of biochemical equilibria within living cells.

Authors:  Germán Rivas; Allen P Minton
Journal:  Biophys Rev       Date:  2017-12-12

5.  Atomistic Simulation of Lysozyme in Solutions Crowded by Tetraethylene Glycol: Force Field Dependence.

Authors:  Donglin Liu; Yejie Qiu; Qing Li; Haiyang Zhang
Journal:  Molecules       Date:  2022-03-25       Impact factor: 4.411

  5 in total

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