Literature DB >> 28502045

A Clinical and Molecular Genetic Study of 50 Families with Autosomal Recessive Parkinsonism Revealed Known and Novel Gene Mutations.

Shaghayegh Taghavi1, Rita Chaouni2, Abbas Tafakhori3, Luis J Azcona2,4, Saghar Ghasemi Firouzabadi5, Mir Davood Omrani1, Javad Jamshidi6, Babak Emamalizadeh7, Gholam Ali Shahidi8, Mona Ahmadi3, Seyed Amir Hassan Habibi8, Azadeh Ahmadifard1, Atena Fazeli1, Marzieh Motallebi1, Peyman Petramfar9, Saeed Askarpour1, Shiva Askarpour9, Hossein Ali Shahmohammadibeni10, Neda Shahmohammadibeni11, Hajar Eftekhari11, Amir Ehtesham Shafiei Zarneh1, Saeed Mohammadihosseinabad1, Mehdi Khorrami1, Safa Najmi12, Ahmad Chitsaz13, Parasto Shokraeian14, Hossein Ehsanbakhsh1, Jalal Rezaeidian1, Reza Ebrahimi Rad15, Faranak Madadi1, Monavvar Andarva1, Elham Alehabib1, Minoo Atakhorrami1, Seyed Erfan Mortazavi1, Zahra Azimzadeh1, Mahdis Bayat1, Amir Mohammad Besharati1, Mohammad Ali Harati-Ghavi1, Samareh Omidvari1, Zahra Dehghani-Tafti1, Faraz Mohammadi1, Banafsheh Mohammad Hossein Pour1, Hamid Noorollahi Moghaddam16, Ehsan Esmaili Shandiz17, Arman Habibi8, Zahra Taherian-Esfahani1, Hossein Darvish18, Coro Paisán-Ruiz19,20,21.   

Abstract

In this study, the role of known Parkinson's disease (PD) genes was examined in families with autosomal recessive (AR) parkinsonism to assist with the differential diagnosis of PD. Some families without mutations in known genes were also subject to whole genome sequencing with the objective to identify novel parkinsonism-related genes. Families were selected from 4000 clinical files of patients with PD or parkinsonism. AR inheritance pattern, consanguinity, and a minimum of two affected individuals per family were used as inclusion criteria. For disease gene/mutation identification, multiplex ligation-dependent probe amplification, quantitative PCR, linkage, and Sanger and whole genome sequencing assays were carried out. A total of 116 patients (50 families) were examined. Fifty-four patients (46.55%; 22 families) were found to carry pathogenic mutations in known genes while a novel gene, not previously associated with parkinsonism, was found mutated in a single family (2 patients). Pathogenic mutations, including missense, nonsense, frameshift, and exon rearrangements, were found in Parkin, PINK1, DJ-1, SYNJ1, and VAC14 genes. In conclusion, variable phenotypic expressivity was seen across all families.

Entities:  

Keywords:  Early-onset; Genotype-phenotype correlations; Parkinson’s disease; Pathogenic mutations

Mesh:

Substances:

Year:  2017        PMID: 28502045      PMCID: PMC5683945          DOI: 10.1007/s12035-017-0535-1

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.590


  42 in total

1.  Detection of copy number changes in genes associated with Parkinson's disease in Iranian patients.

Authors:  Hossein Darvish; Abolfazl Movafagh; Mir Davood Omrani; Saghar Ghasemi Firouzabadi; Eznollah Azargashb; Javad Jamshidi; Ali Khaligh; Leyla Haghnejad; Nilofar Safavi Naeini; Atefeh Talebi; Hamid Reza Heidari-Rostami; Hamid Noorollahi-Moghaddam; Siamak Karkheiran; Gholam-Ali Shahidi; Seyed Mohammad Hassan Paknejad; Hossein Ashrafian; Siamak Abdi; Matin Kayyal; Mojdeh Akbari; Negar Pedram; Babak Emamalizadeh
Journal:  Neurosci Lett       Date:  2013-07-21       Impact factor: 3.046

2.  The Sac1 domain of SYNJ1 identified mutated in a family with early-onset progressive Parkinsonism with generalized seizures.

Authors:  Catharine E Krebs; Siamak Karkheiran; James C Powell; Mian Cao; Vladimir Makarov; Hossein Darvish; Gilbert Di Paolo; Ruth H Walker; Gholam Ali Shahidi; Joseph D Buxbaum; Pietro De Camilli; Zhenyu Yue; Coro Paisán-Ruiz
Journal:  Hum Mutat       Date:  2013-07-19       Impact factor: 4.878

Review 3.  Milestones in Parkinson's disease--clinical and pathologic features.

Authors:  Glenda Halliday; Andrew Lees; Matthew Stern
Journal:  Mov Disord       Date:  2011-05       Impact factor: 10.338

4.  Hereditary parkinsonism with dementia is caused by mutations in ATP13A2, encoding a lysosomal type 5 P-type ATPase.

Authors:  Alfredo Ramirez; André Heimbach; Jan Gründemann; Barbara Stiller; Dan Hampshire; L Pablo Cid; Ingrid Goebel; Ammar F Mubaidin; Abdul-Latif Wriekat; Jochen Roeper; Amir Al-Din; Axel M Hillmer; Meliha Karsak; Birgit Liss; C Geoffrey Woods; Maria I Behrens; Christian Kubisch
Journal:  Nat Genet       Date:  2006-09-10       Impact factor: 38.330

5.  Performance of mutation pathogenicity prediction methods on missense variants.

Authors:  Janita Thusberg; Ayodeji Olatubosun; Mauno Vihinen
Journal:  Hum Mutat       Date:  2011-02-22       Impact factor: 4.878

Review 6.  The genetic background of Parkinson's disease: current progress and future prospects.

Authors:  K Kalinderi; S Bostantjopoulou; L Fidani
Journal:  Acta Neurol Scand       Date:  2016-02-12       Impact factor: 3.209

7.  Familial Parkinson disease gene product, parkin, is a ubiquitin-protein ligase.

Authors:  H Shimura; N Hattori; S i Kubo; Y Mizuno; S Asakawa; S Minoshima; N Shimizu; K Iwai; T Chiba; K Tanaka; T Suzuki
Journal:  Nat Genet       Date:  2000-07       Impact factor: 38.330

8.  Autoregulation of Parkin activity through its ubiquitin-like domain.

Authors:  Viduth K Chaugule; Lynn Burchell; Kathryn R Barber; Ateesh Sidhu; Simon J Leslie; Gary S Shaw; Helen Walden
Journal:  EMBO J       Date:  2011-06-21       Impact factor: 11.598

9.  Identification of a Large DNAJB2 Deletion in a Family with Spinal Muscular Atrophy and Parkinsonism.

Authors:  Elena Sanchez; Hossein Darvish; Roxana Mesias; Shaghyegh Taghavi; Saghar Ghasemi Firouzabadi; Ruth H Walker; Abbas Tafakhori; Coro Paisán-Ruiz
Journal:  Hum Mutat       Date:  2016-08-21       Impact factor: 4.878

Review 10.  The genetics of Parkinson's syndromes: a critical review.

Authors:  John Hardy; Patrick Lewis; Tamas Revesz; Andrew Lees; Coro Paisan-Ruiz
Journal:  Curr Opin Genet Dev       Date:  2009-05-04       Impact factor: 5.578

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  22 in total

1.  Synj1 haploinsufficiency causes dopamine neuron vulnerability and alpha-synuclein accumulation in mice.

Authors:  Ping-Yue Pan; Patricia Sheehan; Qian Wang; Xinyu Zhu; Yuanxi Zhang; Insup Choi; Xianting Li; Jacqueline Saenz; Justin Zhu; Jing Wang; Farida El Gaamouch; Li Zhu; Dongming Cai; Zhenyu Yue
Journal:  Hum Mol Genet       Date:  2020-08-11       Impact factor: 6.150

2.  VAC14 Gene-Related Parkinsonism-Dystonia With Response to Deep Brain Stimulation.

Authors:  Claudio M de Gusmao; Scellig Stone; Jeff L Waugh; Edward Yang; Guy M Lenk; Lance H Rodan
Journal:  Mov Disord Clin Pract       Date:  2019-06-21

3.  Peripheral synucleinopathy in a DJ1 patient with Parkinson disease, cataracts, and hearing loss.

Authors:  Derek P Narendra; Risa Isonaka; Diana Nguyen; Alice B Schindler; Angela D Kokkinis; Debra Ehrlich; Tanya M Bardakjian; David S Goldstein; Tsao-Wei Liang; Pedro Gonzalez-Alegre
Journal:  Neurology       Date:  2019-04-26       Impact factor: 9.910

Review 4.  CRISPR System: A High-throughput Toolbox for Research and Treatment of Parkinson's Disease.

Authors:  Fatemeh Safari; Gholamreza Hatam; Abbas Behzad Behbahani; Vahid Rezaei; Mazyar Barekati-Mowahed; Peyman Petramfar; Farzaneh Khademi
Journal:  Cell Mol Neurobiol       Date:  2019-11-26       Impact factor: 5.046

Review 5.  The contribution of CNVs to the most common aging-related neurodegenerative diseases.

Authors:  Giulia Gentile; Valentina La Cognata; Sebastiano Cavallaro
Journal:  Aging Clin Exp Res       Date:  2020-02-06       Impact factor: 3.636

Review 6.  The role of monogenic genes in idiopathic Parkinson's disease.

Authors:  Xylena Reed; Sara Bandrés-Ciga; Cornelis Blauwendraat; Mark R Cookson
Journal:  Neurobiol Dis       Date:  2018-11-15       Impact factor: 5.996

7.  Development of the variant calling algorithm, ADIScan, and its use to estimate discordant sequences between monozygotic twins.

Authors:  Yangrae Cho; Sunho Lee; Jong Hui Hong; Byong Joon Kim; Woon-Young Hong; Jongcheol Jung; Hyang Burm Lee; Joohon Sung; Han-Na Kim; Hyung-Lae Kim; Jongsun Jung
Journal:  Nucleic Acids Res       Date:  2018-09-06       Impact factor: 16.971

8.  A Novel SYNJ1 Mutation in a Tunisian Family with Juvenile Parkinson's Disease Associated with Epilepsy.

Authors:  Sawssan Ben Romdhan; Salma Sakka; Nouha Farhat; Siwar Triki; Mariem Dammak; Chokri Mhiri
Journal:  J Mol Neurosci       Date:  2018-09-05       Impact factor: 3.444

Review 9.  Nosology and Phenomenology of Psychosis in Movement Disorders.

Authors:  Malco Rossi; Nicole Farcy; Sergio E Starkstein; Marcelo Merello
Journal:  Mov Disord Clin Pract       Date:  2020-01-07

Review 10.  A Practical Approach to Early-Onset Parkinsonism.

Authors:  Giulietta M Riboldi; Emanuele Frattini; Edoardo Monfrini; Steven J Frucht; Alessio Di Fonzo
Journal:  J Parkinsons Dis       Date:  2022       Impact factor: 5.568

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