Literature DB >> 28501699

The AGES-Reykjavik study atlases: Non-linear multi-spectral template and atlases for studies of the ageing brain.

Lars Forsberg1, Sigurdur Sigurdsson2, Jesper Fredriksson3, Asdis Egilsdottir2, Bryndis Oskarsdottir2, Olafur Kjartansson2, Mark A van Buchem4, Lenore J Launer5, Vilmundur Gudnason6, Alex Zijdenbos7.   

Abstract

Quantitative analyses of brain structures from Magnetic Resonance (MR) image data are often performed using automatic segmentation algorithms. Many of these algorithms rely on templates and atlases in a common coordinate space. Most freely available brain atlases are generated from relatively young individuals and not always derived from well-defined cohort studies. In this paper, we introduce a publicly available multi-spectral template with corresponding tissue probability atlases and regional atlases, optimised to use in studies of ageing cohorts (mean age 75 ± 5 years). Furthermore, we provide validation data from a regional segmentation pipeline to assure the integrity of the dataset.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Ageing; Atlas; Brain; MRI

Mesh:

Year:  2017        PMID: 28501699      PMCID: PMC5545887          DOI: 10.1016/j.media.2017.04.009

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  31 in total

1.  Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.

Authors:  Bruce Fischl; David H Salat; Evelina Busa; Marilyn Albert; Megan Dieterich; Christian Haselgrove; Andre van der Kouwe; Ron Killiany; David Kennedy; Shuna Klaveness; Albert Montillo; Nikos Makris; Bruce Rosen; Anders M Dale
Journal:  Neuron       Date:  2002-01-31       Impact factor: 17.173

Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Construction of a 3D probabilistic atlas of human cortical structures.

Authors:  David W Shattuck; Mubeena Mirza; Vitria Adisetiyo; Cornelius Hojatkashani; Georges Salamon; Katherine L Narr; Russell A Poldrack; Robert M Bilder; Arthur W Toga
Journal:  Neuroimage       Date:  2007-11-26       Impact factor: 6.556

4.  Multimodal image coregistration and partitioning--a unified framework.

Authors:  J Ashburner; K Friston
Journal:  Neuroimage       Date:  1997-10       Impact factor: 6.556

5.  Unbiased average age-appropriate atlases for pediatric studies.

Authors:  Vladimir Fonov; Alan C Evans; Kelly Botteron; C Robert Almli; Robert C McKinstry; D Louis Collins
Journal:  Neuroimage       Date:  2010-07-23       Impact factor: 6.556

6.  Accuracy and precision of the computerized brain atlas programme for localization and quantification in positron emission tomography.

Authors:  R J Seitz; C Bohm; T Greitz; P E Roland; L Eriksson; G Blomqvist; G Rosenqvist; B Nordell
Journal:  J Cereb Blood Flow Metab       Date:  1990-07       Impact factor: 6.200

7.  Fast and robust multi-atlas segmentation of brain magnetic resonance images.

Authors:  Jyrki Mp Lötjönen; Robin Wolz; Juha R Koikkalainen; Lennart Thurfjell; Gunhild Waldemar; Hilkka Soininen; Daniel Rueckert
Journal:  Neuroimage       Date:  2009-10-24       Impact factor: 6.556

8.  Misclassified tissue volumes in Alzheimer disease patients with white matter hyperintensities: importance of lesion segmentation procedures for volumetric analysis.

Authors:  Naama Levy-Cooperman; Joel Ramirez; Nancy J Lobaugh; Sandra E Black
Journal:  Stroke       Date:  2008-03-06       Impact factor: 7.914

9.  Automatic anatomical brain MRI segmentation combining label propagation and decision fusion.

Authors:  Rolf A Heckemann; Joseph V Hajnal; Paul Aljabar; Daniel Rueckert; Alexander Hammers
Journal:  Neuroimage       Date:  2006-07-24       Impact factor: 6.556

10.  Multi-centre reproducibility of diffusion MRI parameters for clinical sequences in the brain.

Authors:  Matthew Grech-Sollars; Patrick W Hales; Keiko Miyazaki; Felix Raschke; Daniel Rodriguez; Martin Wilson; Simrandip K Gill; Tina Banks; Dawn E Saunders; Jonathan D Clayden; Matt N Gwilliam; Thomas R Barrick; Paul S Morgan; Nigel P Davies; James Rossiter; Dorothee P Auer; Richard Grundy; Martin O Leach; Franklyn A Howe; Andrew C Peet; Chris A Clark
Journal:  NMR Biomed       Date:  2015-04       Impact factor: 4.044

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  3 in total

1.  Structural covariability hubs in old age.

Authors:  Lars Forsberg; Sigurdur Sigurdsson; Lenore J Launer; Vilmundur Gudnason; Fredrik Ullén
Journal:  Neuroimage       Date:  2019-01-19       Impact factor: 6.556

2.  A joint ventricle and WMH segmentation from MRI for evaluation of healthy and pathological changes in the aging brain.

Authors:  Hans E Atlason; Askell Love; Vidar Robertsson; Ari M Blitz; Sigurdur Sigurdsson; Vilmundur Gudnason; Lotta M Ellingsen
Journal:  PLoS One       Date:  2022-09-06       Impact factor: 3.752

3.  SegAE: Unsupervised white matter lesion segmentation from brain MRIs using a CNN autoencoder.

Authors:  Hans E Atlason; Askell Love; Sigurdur Sigurdsson; Vilmundur Gudnason; Lotta M Ellingsen
Journal:  Neuroimage Clin       Date:  2019-11-09       Impact factor: 4.881

  3 in total

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