Literature DB >> 28497014

The E. histolytica Genome Structure and Virulence.

Carol A Gilchrist1.   

Abstract

The outcome of an Entamoeba histolytica infection is variable and the contribution of genetic diversity within E. histolytica to human disease is not fully understood. The information provided by the whole genome sequence of the E. histolytica reference laboratory strain (HM-1:IMSS) and thirteen additional laboratory strains have been made publically available. In this review theories on the source of the unexpected level of structural diversity found in E. histolytica will be discussed.

Entities:  

Keywords:  cyclin-2; genome; single nucleotide polymorphisms; structural diversity

Year:  2016        PMID： 28497014      PMCID： PMC5421561          DOI： 10.1007/s40475-016-0088-9

Source DB:  PubMed          Journal:  Curr Trop Med Rep


  59 in total

1.  Coding and noncoding genomic regions of Entamoeba histolytica have significantly different rates of sequence polymorphisms: implications for epidemiological studies.

Authors:  Dhruva Bhattacharya; Rashidul Haque; Upinder Singh
Journal:  J Clin Microbiol       Date:  2005-09       Impact factor: 5.948

2.  High-throughput DNA sequencing errors are reduced by orders of magnitude using circle sequencing.

Authors:  Dianne I Lou; Jeffrey A Hussmann; Ross M McBee; Ashley Acevedo; Raul Andino; William H Press; Sara L Sawyer
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-15       Impact factor: 11.205

3.  The genome of the protist parasite Entamoeba histolytica.

Authors:  Brendan Loftus; Iain Anderson; Rob Davies; U Cecilia M Alsmark; John Samuelson; Paolo Amedeo; Paola Roncaglia; Matt Berriman; Robert P Hirt; Barbara J Mann; Tomo Nozaki; Bernard Suh; Mihai Pop; Michael Duchene; John Ackers; Egbert Tannich; Matthias Leippe; Margit Hofer; Iris Bruchhaus; Ute Willhoeft; Alok Bhattacharya; Tracey Chillingworth; Carol Churcher; Zahra Hance; Barbara Harris; David Harris; Kay Jagels; Sharon Moule; Karen Mungall; Doug Ormond; Rob Squares; Sally Whitehead; Michael A Quail; Ester Rabbinowitsch; Halina Norbertczak; Claire Price; Zheng Wang; Nancy Guillén; Carol Gilchrist; Suzanne E Stroup; Sudha Bhattacharya; Anuradha Lohia; Peter G Foster; Thomas Sicheritz-Ponten; Christian Weber; Upinder Singh; Chandrama Mukherjee; Najib M El-Sayed; William A Petri; C Graham Clark; T Martin Embley; Bart Barrell; Claire M Fraser; Neil Hall
Journal:  Nature       Date:  2005-02-24       Impact factor: 49.962

4.  DNA sequences corresponding to the ariel gene family of Entamoeba histolytica are not present in E. dispar.

Authors:  U Willhoeft; H Buss; E Tannich
Journal:  Parasitol Res       Date:  1999-08       Impact factor: 2.289

5.  Evidence for lateral transfer of genes encoding ferredoxins, nitroreductases, NADH oxidase, and alcohol dehydrogenase 3 from anaerobic prokaryotes to Giardia lamblia and Entamoeba histolytica.

Authors:  Julie E J Nixon; Amy Wang; Jessica Field; Hilary G Morrison; Andrew G McArthur; Mitchell L Sogin; Brendan J Loftus; John Samuelson
Journal:  Eukaryot Cell       Date:  2002-04

6.  Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis.

Authors:  U Cecilia Alsmark; Thomas Sicheritz-Ponten; Peter G Foster; Robert P Hirt; T Martin Embley
Journal:  Methods Mol Biol       Date:  2009

Review 7.  Genome re-duplication and irregular segregation occur during the cell cycle of Entamoeba histolytica.

Authors:  Anuradha Lohia; Chandrama Mukherjee; Shubhra Majumder; Promita Ghosh Dastidar
Journal:  Biosci Rep       Date:  2007-12       Impact factor: 3.840

8.  Influence of human leukocyte antigen class II alleles on susceptibility to Entamoeba histolytica infection in Bangladeshi children.

Authors:  Priya Duggal; Rashidul Haque; Shantanu Roy; Dinesh Mondal; R Bradley Sack; Barry M Farr; Terri H Beaty; William A Petri
Journal:  J Infect Dis       Date:  2004-01-20       Impact factor: 5.226

9.  The genome and transcriptome of the enteric parasite Entamoeba invadens, a model for encystation.

Authors:  Gretchen M Ehrenkaufer; Gareth D Weedall; Daryl Williams; Hernan A Lorenzi; Elisabet Caler; Neil Hall; Upinder Singh
Journal:  Genome Biol       Date:  2013-07-26       Impact factor: 13.583

10.  Patterns of evolution in the unique tRNA gene arrays of the genus Entamoeba.

Authors:  Blessing Tawari; Ibne Karim M Ali; Claire Scott; Michael A Quail; Matthew Berriman; Neil Hall; C Graham Clark
Journal:  Mol Biol Evol       Date:  2007-11-01       Impact factor: 16.240
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  1 in total

1.  Whole genome sequencing of Entamoeba nuttalli reveals mammalian host-related molecular signatures and a novel octapeptide-repeat surface protein.

Authors:  Masayuki Tanaka; Takashi Makiuchi; Tomoyoshi Komiyama; Takashi Shiina; Ken Osaki; Hiroshi Tachibana
Journal:  PLoS Negl Trop Dis       Date:  2019-12-05
  1 in total

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