Literature DB >> 28496995

Genomic Microarray in Intellectual Disability: The Usefulness of Existing Systems in the Interpretation of Copy Number Variation.

Hela Ben Khelifa1, Najla Soyah2, Audrey Labalme3, Helene Guilbert3, Damien Sanlaville3, Ali Saad1, Soumaya Mougou-Zerelli1.   

Abstract

Whole genome array technology is an essential tool for the detection of a large number of copy number variants (CNVs) in patients with ID and/or multiple congenital anomalies. However, the clinical significance of some microimbalances is not known. In this article, we succeeded to detect seven new variations of unknown significance (dup12p13.33, dup2p16.3, dupXq13.2, del12q24.33, dup16p13.11, trip4q22.1, and dup9p21.3), one CNV classified as known pathogenic syndrome (del22q13.31-q33), and one CNV classified as potentially pathogenic (del11q24.3). We emphasize the role of comparative genomic hybridization arrays in the investigation of intellectual disability and evaluate the usefulness of existing systems in the interpretation of CNVs.

Entities:  

Keywords:  comparative genomic hybridization array; copy number variants; intellectual disability; qPCR

Year:  2016        PMID: 28496995      PMCID: PMC5423794          DOI: 10.1055/s-0036-1588027

Source DB:  PubMed          Journal:  J Pediatr Genet        ISSN: 2146-460X


  14 in total

Review 1.  Telomeres: a diagnosis at the end of the chromosomes.

Authors:  B B A De Vries; R Winter; A Schinzel; C van Ravenswaaij-Arts
Journal:  J Med Genet       Date:  2003-06       Impact factor: 6.318

Review 2.  Copy number variations and clinical cytogenetic diagnosis of constitutional disorders.

Authors:  Charles Lee; A John Iafrate; Arthur R Brothman
Journal:  Nat Genet       Date:  2007-07       Impact factor: 38.330

3.  Challenges for CNV interpretation in clinical molecular karyotyping: lessons learned from a 1001 sample experience.

Authors:  Karen Buysse; Barbara Delle Chiaie; Rudy Van Coster; Bart Loeys; Anne De Paepe; Geert Mortier; Frank Speleman; Björn Menten
Journal:  Eur J Med Genet       Date:  2009-09-16       Impact factor: 2.708

4.  Additional cryptic CNVs in mentally retarded patients with apparently balanced karyotypes.

Authors:  Antoinet C J Gijsbers; Cathy A J Bosch; Johannes G Dauwerse; Osdilly Giromus; Kerstin Hansson; Yvonne Hilhorst-Hofstee; Marjolein Kriek; Arie van Haeringen; Emilia K Bijlsma; Egbert Bakker; Martijn H Breuning; Claudia A L Ruivenkamp
Journal:  Eur J Med Genet       Date:  2010-06-11       Impact factor: 2.708

5.  22q13.3 deletion syndrome: clinical and molecular analysis using array CGH.

Authors:  S U Dhar; D del Gaudio; J R German; S U Peters; Z Ou; P I Bader; J S Berg; M Blazo; C W Brown; B H Graham; T A Grebe; S Lalani; M Irons; S Sparagana; M Williams; J A Phillips; A L Beaudet; P Stankiewicz; A Patel; S W Cheung; T Sahoo
Journal:  Am J Med Genet A       Date:  2010-03       Impact factor: 2.802

6.  Structural genomic variation in intellectual disability.

Authors:  Rolph Pfundt; Joris A Veltman
Journal:  Methods Mol Biol       Date:  2012

7.  Etiology of mental retardation in children referred to a tertiary care center: a prospective study.

Authors:  Clara D M van Karnebeek; Frederike Y Scheper; Nico G Abeling; Marielle Alders; Peter G Barth; Jan M N Hoovers; Cindy Koevoets; Ronald J A Wanders; Raoul C M Hennekam
Journal:  Am J Ment Retard       Date:  2005-07

8.  Global variation in copy number in the human genome.

Authors:  Richard Redon; Shumpei Ishikawa; Karen R Fitch; Lars Feuk; George H Perry; T Daniel Andrews; Heike Fiegler; Michael H Shapero; Andrew R Carson; Wenwei Chen; Eun Kyung Cho; Stephanie Dallaire; Jennifer L Freeman; Juan R González; Mònica Gratacòs; Jing Huang; Dimitrios Kalaitzopoulos; Daisuke Komura; Jeffrey R MacDonald; Christian R Marshall; Rui Mei; Lyndal Montgomery; Kunihiro Nishimura; Kohji Okamura; Fan Shen; Martin J Somerville; Joelle Tchinda; Armand Valsesia; Cara Woodwark; Fengtang Yang; Junjun Zhang; Tatiana Zerjal; Jane Zhang; Lluis Armengol; Donald F Conrad; Xavier Estivill; Chris Tyler-Smith; Nigel P Carter; Hiroyuki Aburatani; Charles Lee; Keith W Jones; Stephen W Scherer; Matthew E Hurles
Journal:  Nature       Date:  2006-11-23       Impact factor: 49.962

9.  A new diagnostic workflow for patients with mental retardation and/or multiple congenital abnormalities: test arrays first.

Authors:  Antoinet C J Gijsbers; Janet Y K Lew; Cathy A J Bosch; Janneke H M Schuurs-Hoeijmakers; Arie van Haeringen; Nicolette S den Hollander; Sarina G Kant; Emilia K Bijlsma; Martijn H Breuning; Egbert Bakker; Claudia A L Ruivenkamp
Journal:  Eur J Hum Genet       Date:  2009-05-13       Impact factor: 4.246

10.  Evidence for autism spectrum disorder in Jacobsen syndrome: identification of a candidate gene in distal 11q.

Authors:  Natacha Akshoomoff; Sarah N Mattson; Paul D Grossfeld
Journal:  Genet Med       Date:  2014-07-24       Impact factor: 8.822

View more
  1 in total

1.  Chromosomal Microarray Analysis in Children with Unexplained Developmental Delay/Intellectual Disability.

Authors:  Pinar Arican; Nihal Olgac Dundar; Berk Ozyilmaz; Dilek Cavusoglu; Pinar Gencpinar; Kadri Murat Erdogan; Merve Saka Guvenc
Journal:  J Pediatr Genet       Date:  2018-12-14
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.