Literature DB >> 28492990

Field-Scale Pattern of Denitrifying Microorganisms and N2O Emission Rates Indicate a High Potential for Complete Denitrification in an Agriculturally Used Organic Soil.

Stefanie Schulz1, Angelika Kölbl2, Martin Ebli3, Franz Buegger4, Michael Schloter1, Sabine Fiedler5.   

Abstract

More than 50% of all anthropogenic N2O emissions come from the soil. Drained Histosols that are used for agricultural purposes are particularly potent sources of denitrification due to higher stocks of organic matter and fertiliser application. However, conditions that favour denitrification can vary considerably across a field and change significantly throughout the year. Spatial and temporal denitrifier dynamics were assessed in a drained, intensely managed Histosol by focusing on the genetic nitrite and N2O reduction potential derived from the abundance of nirK, nirS and nosZ genes. These data were correlated with soil properties at two different points in time in 2013. N2O emissions were measured every 2 weeks over three vegetation periods (2012-2014). Very low N2O emission rates were measured throughout the entire period of investigation in accordance with the geostatistical data that revealed an abundance of microbes carrying the N2O reductase gene nosZ. This, along with neutral soil pH values, is indicative of high microbial denitrification potential. While the distribution of the microbial communities was strongly influenced by total organic carbon and nitrogen pools in March, the spatial distribution pattern was not related to the distribution of soil properties in October, when higher nutrient availability was observed. Different nitrite reducer groups prevailed in spring and autumn. While nirS, followed by nosZ and nirK, was most abundant in March, the latter was the dominant nitrite reductase in October.

Entities:  

Keywords:  Denitrification; Geostatistic; Histosol; Organic soil; nirK; nirS; nosZ

Mesh:

Substances:

Year:  2017        PMID: 28492990     DOI: 10.1007/s00248-017-0991-1

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  20 in total

1.  Comparison of methods for quantification of cytochrome cd(1)-denitrifying bacteria in environmental marine samples.

Authors:  V Michotey; V Méjean; P Bonin
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  Soil resources influence spatial patterns of denitrifying communities at scales compatible with land management.

Authors:  Karin Enwall; Ingela N Throbäck; Maria Stenberg; Mats Söderström; Sara Hallin
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

3.  Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes.

Authors:  Shilpi Sharma; Manish Kumar Aneja; Jochen Mayer; Jean Charles Munch; Michael Schloter
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

4.  Effects of plant biomass on denitrifying genes in subsurface-flow constructed wetlands.

Authors:  Yi Chen; Yue Wen; Qi Zhou; Jan Vymazal
Journal:  Bioresour Technol       Date:  2014-02-11       Impact factor: 9.642

5.  Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils.

Authors:  S Henry; D Bru; B Stres; S Hallet; L Philippot
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

6.  Abundance of microbes involved in nitrogen transformation in the rhizosphere of Leucanthemopsis alpina (L.) Heywood grown in soils from different sites of the Damma glacier forefield.

Authors:  Stefanie Töwe; Andreas Albert; Kristina Kleineidam; Robert Brankatschk; Alexander Dümig; Gerhard Welzl; Jean Charles Munch; Josef Zeyer; Michael Schloter
Journal:  Microb Ecol       Date:  2010-06-12       Impact factor: 4.552

7.  Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification.

Authors:  Christopher M Jones; Blaz Stres; Magnus Rosenquist; Sara Hallin
Journal:  Mol Biol Evol       Date:  2008-07-08       Impact factor: 16.240

8.  Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples.

Authors:  G Braker; A Fesefeldt; K P Witzel
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

9.  Soil nitrate reducing processes - drivers, mechanisms for spatial variation, and significance for nitrous oxide production.

Authors:  Madeline Giles; Nicholas Morley; Elizabeth M Baggs; Tim J Daniell
Journal:  Front Microbiol       Date:  2012-12-18       Impact factor: 5.640

10.  Spatial Interaction of Archaeal Ammonia-Oxidizers and Nitrite-Oxidizing Bacteria in an Unfertilized Grassland Soil.

Authors:  Barbara Stempfhuber; Tim Richter-Heitmann; Kathleen M Regan; Angelika Kölbl; Pia K Wüst; Sven Marhan; Johannes Sikorski; Jörg Overmann; Michael W Friedrich; Ellen Kandeler; Michael Schloter
Journal:  Front Microbiol       Date:  2016-01-22       Impact factor: 5.640

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  2 in total

1.  The Structure and Species Co-Occurrence Networks of Soil Denitrifying Bacterial Communities Differ Between A Coniferous and A Broadleaved Forests.

Authors:  Jie Chen; Jiajia Li; Weijun Shen; Han Xu; Yide Li; Tushou Luo
Journal:  Microorganisms       Date:  2019-09-18

2.  Gross N2O Production Process, Not Consumption, Determines the Temperature Sensitivity of Net N2O Emission in Arable Soil Subject to Different Long-Term Fertilization Practices.

Authors:  Chang Yin; Xiaoping Fan; Guochao Yan; Hao Chen; Mujun Ye; Liang Ni; Hongyun Peng; Wei Ran; Yuhua Zhao; Tingqiang Li; Steven A Wakelin; Yongchao Liang
Journal:  Front Microbiol       Date:  2020-04-28       Impact factor: 5.640

  2 in total

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