Literature DB >> 28484899

Functional connectivity models for decoding of spatial representations from hippocampal CA1 recordings.

Lorenzo Posani1, Simona Cocco2, Karel Ježek3, Rémi Monasson4.   

Abstract

Hippocampus stores spatial representations, or maps, which are recalled each time a subject is placed in the corresponding environment. Across different environments of similar geometry, these representations show strong orthogonality in CA3 of hippocampus, whereas in the CA1 subfield a considerable overlap between the maps can be seen. The lower orthogonality decreases reliability of various decoders developed in an attempt to identify which of the stored maps is active at the moment. Especially, the problem with decoding emerges with a need to analyze data at high temporal resolution. Here, we introduce a functional-connectivity-based decoder, which accounts for the pairwise correlations between the spiking activities of neurons in each map and does not require any positional information, i.e. any knowledge about place fields. We first show, on recordings of hippocampal activity in constant environmental conditions, that our decoder outperforms existing decoding methods in CA1. Our decoder is then applied to data from teleportation experiments, in which an instantaneous switch between the environment identity triggers a recall of the corresponding spatial representation . We test the sensitivity of our approach on the transition dynamics between the respective memory states (maps). We find that the rate of spontaneous state shifts (flickering) after a teleportation event is increased not only within the first few seconds as already reported, but this instability is sustained across much longer (> 1 min.) periods.

Entities:  

Keywords:  Bayesian inference; CA1; Decoding; Functional connectivity; Graphical models; Hippocampus; Spatial representation

Mesh:

Year:  2017        PMID: 28484899     DOI: 10.1007/s10827-017-0645-9

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  27 in total

1.  Theta-paced flickering between place-cell maps in the hippocampus.

Authors:  Karel Jezek; Espen J Henriksen; Alessandro Treves; Edvard I Moser; May-Britt Moser
Journal:  Nature       Date:  2011-09-28       Impact factor: 49.962

2.  Attractor-map versus autoassociation based attractor dynamics in the hippocampal network.

Authors:  Laura L Colgin; Stefan Leutgeb; Karel Jezek; Jill K Leutgeb; Edvard I Moser; Bruce L McNaughton; May-Britt Moser
Journal:  J Neurophysiol       Date:  2010-05-05       Impact factor: 2.714

Review 3.  Inferring functional connections between neurons.

Authors:  Ian H Stevenson; James M Rebesco; Lee E Miller; Konrad P Körding
Journal:  Curr Opin Neurobiol       Date:  2008-12-08       Impact factor: 6.627

4.  Fast inference of interactions in assemblies of stochastic integrate-and-fire neurons from spike recordings.

Authors:  Remi Monasson; Simona Cocco
Journal:  J Comput Neurosci       Date:  2011-01-11       Impact factor: 1.621

5.  Interpreting neuronal population activity by reconstruction: unified framework with application to hippocampal place cells.

Authors:  K Zhang; I Ginzburg; B L McNaughton; T J Sejnowski
Journal:  J Neurophysiol       Date:  1998-02       Impact factor: 2.714

6.  Place cell discharge is extremely variable during individual passes of the rat through the firing field.

Authors:  A A Fenton; R U Muller
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-17       Impact factor: 11.205

7.  ACE: adaptive cluster expansion for maximum entropy graphical model inference.

Authors:  J P Barton; E De Leonardis; A Coucke; S Cocco
Journal:  Bioinformatics       Date:  2016-06-21       Impact factor: 6.937

8.  The hippocampus as a spatial map. Preliminary evidence from unit activity in the freely-moving rat.

Authors:  J O'Keefe; J Dostrovsky
Journal:  Brain Res       Date:  1971-11       Impact factor: 3.252

Review 9.  Computational analysis of the role of the hippocampus in memory.

Authors:  A Treves; E T Rolls
Journal:  Hippocampus       Date:  1994-06       Impact factor: 3.899

10.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

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  4 in total

1.  The covariance perceptron: A new paradigm for classification and processing of time series in recurrent neuronal networks.

Authors:  Matthieu Gilson; David Dahmen; Rubén Moreno-Bote; Andrea Insabato; Moritz Helias
Journal:  PLoS Comput Biol       Date:  2020-10-12       Impact factor: 4.475

2.  Functional coupling networks inferred from prefrontal cortex activity show experience-related effective plasticity.

Authors:  Gaia Tavoni; Ulisse Ferrari; Francesco P Battaglia; Simona Cocco; Rémi Monasson
Journal:  Netw Neurosci       Date:  2017-10-01

3.  Differential Relation between Neuronal and Behavioral Discrimination during Hippocampal Memory Encoding.

Authors:  Manuela Allegra; Lorenzo Posani; Ruy Gómez-Ocádiz; Christoph Schmidt-Hieber
Journal:  Neuron       Date:  2020-10-16       Impact factor: 17.173

4.  Integration and multiplexing of positional and contextual information by the hippocampal network.

Authors:  Lorenzo Posani; Simona Cocco; Rémi Monasson
Journal:  PLoS Comput Biol       Date:  2018-08-14       Impact factor: 4.475

  4 in total

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