Literature DB >> 28484188

C-to-U editing and site-directed RNA editing for the correction of genetic mutations.

Luyen Thi Vu1, Toshifumi Tsukahara1.   

Abstract

Cytidine to uridine (C-to-U) editing is one type of substitutional RNA editing. It occurs in both mammals and plants. The molecular mechanism of C-to-U editing involves the hydrolytic deamination of a cytosine to a uracil base. C-to-U editing is mediated by RNA-specific cytidine deaminases and several complementation factors, which have not been completely identified. Here, we review recent findings related to the regulation and enzymatic basis of C-to-U RNA editing. More importantly, when C-to-U editing occurs in coding regions, it has the power to reprogram genetic information on the RNA level, therefore it has great potential for applications in transcript repair (diseases related to thymidine to cytidine (T>C) or adenosine to guanosine (A>G) point mutations). If it is possible to manipulate or mimic C-to-U editing, T>C or A>G genetic mutation-related diseases could be treated. Enzymatic and non-enzymatic site-directed RNA editing are two different approaches for mimicking C-to-U editing. For enzymatic site-directed RNA editing, C-to-U editing has not yet been successfully performed, and in theory, adenosine to inosine (A-to-I) editing involves the same strategy as C-to-U editing. Therefore, in this review, for applications in transcript repair, we will provide a detailed overview of enzymatic site-directed RNA editing, with a focus on A-to-I editing and non-enzymatic site-directed C-to-U editing.

Entities:  

Keywords:  APOBEC1; C-to-U editing; CNVK-oligodeoxynucleotides; CVU-oligodeoxynucleotides; enzymatic site-directed RNA editing; non-enzymatic site-directed RNA editing

Mesh:

Substances:

Year:  2017        PMID: 28484188     DOI: 10.5582/bst.2017.01049

Source DB:  PubMed          Journal:  Biosci Trends        ISSN: 1881-7815            Impact factor:   2.400


  9 in total

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2.  Harnessing Nature's Molecular Recognition Capabilities to Map and Study RNA Modifications.

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Journal:  Acc Chem Res       Date:  2022-07-28       Impact factor: 24.466

Review 3.  Amyotrophic Lateral Sclerosis: Current Status in Diagnostic Biomarkers.

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Journal:  Adv Exp Med Biol       Date:  2020       Impact factor: 2.622

4.  Human C-to-U Coding RNA Editing Is Largely Nonadaptive.

Authors:  Zhen Liu; Jianzhi Zhang
Journal:  Mol Biol Evol       Date:  2018-04-01       Impact factor: 16.240

Review 5.  RNA Epigenetics: Fine-Tuning Chromatin Plasticity and Transcriptional Regulation, and the Implications in Human Diseases.

Authors:  Amber Willbanks; Shaun Wood; Jason X Cheng
Journal:  Genes (Basel)       Date:  2021-04-22       Impact factor: 4.096

6.  Identification of soybean trans-factors associated with plastid RNA editing sites.

Authors:  Nureyev F Rodrigues; Fábio C S Nogueira; Gilberto B Domont; Rogerio Margis
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7.  MUC1 oncoprotein mitigates ER stress via CDA-mediated reprogramming of pyrimidine metabolism.

Authors:  Appolinaire A Olou; Ryan J King; Fang Yu; Pankaj K Singh
Journal:  Oncogene       Date:  2020-02-26       Impact factor: 9.867

Review 8.  Epitranscriptomics of cardiovascular diseases (Review).

Authors:  Stefanos Leptidis; Eleni Papakonstantinou; Kalliopi Io Diakou; Katerina Pierouli; Thanasis Mitsis; Konstantina Dragoumani; Flora Bacopoulou; Despina Sanoudou; George P Chrousos; Dimitrios Vlachakis
Journal:  Int J Mol Med       Date:  2021-11-18       Impact factor: 4.101

9.  RNA editing of BFP, a point mutant of GFP, using artificial APOBEC1 deaminase to restore the genetic code.

Authors:  Sonali Bhakta; Matomo Sakari; Toshifumi Tsukahara
Journal:  Sci Rep       Date:  2020-10-14       Impact factor: 4.379

  9 in total

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