| Literature DB >> 28482866 |
Kristian I Macdonald1, Shaun J Kilty2, Carl van Walraven3.
Abstract
BACKGROUND: This was a diagnostic accuracy study to develop an algorithm based on administrative database codes that identifies patients with Chronic Rhinosinusitis (CRS) who have endoscopic sinus surgery (ESS).Entities:
Keywords: Administrative database research; Chronic rhinosinusitis; Diagnostic codes; Endoscopic sinus surgery
Mesh:
Year: 2017 PMID: 28482866 PMCID: PMC5422910 DOI: 10.1186/s40463-017-0216-0
Source DB: PubMed Journal: J Otolaryngol Head Neck Surg ISSN: 1916-0208
Administrative database codes used in predictive model
| Chronic Rhinosinusitis | Endoscopic sinus surgery | |||
|---|---|---|---|---|
| Diagnosis | ICD-10 code* | ICD-09 code* | Procedure | CCI code* |
| Chronic sinusitis | J32 | 473 | Therapeutic Interventions on the Ethmoidal Sinus | 1.EU.^^.^^ |
| Chronic maxillary sinusitis | J32.0 | 473.0 | Drainage, ethmoidal sinus | 1.EU.52.^^ |
| Chronic frontal sinusitis | J32.1 | 473.1 | Excision partial, ethmoidal sinus | 1.EU.87.^^ |
| Chronic ethmoidal sinusitis | J32.2 | 473.2 | Therapeutic Interventions on the Sphenoidal Sinus | 1.EV.^^.^^ |
| Chronic sphenoidal sinusitis | J32.3 | 473.3 | Drainage, sphenoidal sinus | 1.EV.52.^^ |
| Chronic pansinusitis | J32.4 | N/A | Excision partial, sphenoidal sinus | 1.EV.87.^^ |
| Other chronic sinusitis | J32.8 | 473.8 | Therapeutic Interventions on the Maxillary Sinus | 1.EW.^^.^^ |
| Chronic sinusitis, unspecified | J32.9 | 473.9 | Excision partial, sphenoidal sinus | 1.EV.87.^^ |
| Nasal polyp | J33 | 471 | Therapeutic Interventions on the Maxillary Sinus | 1.EW.^^.^^ |
| Polyp of nasal cavity | J33.0 | 471.0 | Drainage, maxillary sinus | 1.EW.52.^^ |
| Polypoid sinus degeneration | J33.1 | 471.1 | Therapeutic Interventions on the Frontal Sinus | 1.EX.^^ |
| Other polyp of sinus | J33.8 | 471.8 | Drainage, frontal sinus | 1.EX.52.^^ |
| Nasal polyp, unspecified | J33.9 | 471.9 | Destruction, frontal sinus | 1.EX.59.^^ |
| Repair, frontal sinus | 1.EX.80.^^ | |||
| Excision partial, frontal sinus | 1.EX.87.^^ | |||
| Therapeutic Interventions on the Paranasal Sinuses | 1.EY.^^.^^ | |||
| Excision partial, paranasal sinuses | 1.EY.87.^^ | |||
| Excision radical, paranasal sinuses | 1.EY.91.^^ | |||
Codes used in predictive model to identify patients who had endoscopic sinus surgery for chronic rhinosinusitis, with a chart review as a reference standard
International Classification of Diseases, version 10; CCI Canadian Classification of Health Interventions
Fig. 1Flow chart of chronic rhinosinusitis - endoscopic sinus surgery chart review. Chart review was performed for TOH surgical encounters in which ESS was performed during the defined time period. ESS = endoscopic sinus surgery; CRS = chronic rhinosinusitis; TOH = The Ottawa Hospital
Comparison of validation statistics of three models to predict CRS-ESS encounters
| Model version | Sensitivity % (95%CI) | Specificity % (95%CI) | PPV % (95%CI) |
|---|---|---|---|
| #1: Any CRS diagnostic ICD-10 code | 96.5 (93.9–98.1) | 100 (99.9–100) | 93.3 (90.1–95.6) |
| #2: Any ESS procedural CCI code | 96.8 (94.2–98.3) | 100 (99.9–100) | 93.3 (90.1–95.6) |
| #3: #1 AND #2 | 96.0 (93.2–97.7) | 100 (99.9–100) | 95.4 (92.5–97.2) |
Comparison of three different model versions to predict CRS-ESS status, compared to the reference standard
CI confidence interval, CRS Chronic rhinosinusitis, ESS Endoscopic sinus surgery, PPV positive predictive value
Predictive model vs reference standard for ESS-CRS status
| Model output | Reference standard | Total | |
|---|---|---|---|
| Case | Control | ||
| Case | 333 | 16 | 349 |
| Control | 14 | 184,991 | 185,005 |
| Total | 347 | 185,007 | 185,354 |
Predictive model based on administrative database codes
CCI Canadian Classification of Health Interventions, CRS Chronic rhinosinusitis, ESS Endoscopic sinus surgery, ICD-10 International Classification of Disease, version 10
Fig. 2Overview of final model to identify CRS-ESS case encounters within a surgical cohort. Case was assigned if an encounter contained one of the ICD-10 diagnostic CRS codes, AND one of the CCI procedural ESS codes. CRS = Chronic Rhinosinusitis; ESS = Endoscopic sinus surgery; ICD-10 = International Classification of Diseases, version 10; CCI = Canadian Classification of Health Interventions
Internal validation of predictive model of ESS-CRS status
| Model output | Reference standard | Total | |
|---|---|---|---|
| Case | Control | ||
| Case | 186 | 6 | 192 |
| Control | 2 | 198 | 200 |
| Total | 188 | 204 | 392 |
The ESS-CRS predictive model was applied to all TOH surgical patients in 2013. Sensitivity 98.9% specificity 97.1%, positive predictive value 96.9%
CRS Chronic rhinosinusitis, ESS Endoscopic sinus surgery, TOH The Ottawa Hospital
Standards for reporting diagnostic accuracy studies checklist [12] (2015 version)
| Section & Topic | No | Item | On page & line |
|---|---|---|---|
| Title or Abstract | 1 | Identification as a study of diagnostic accuracy using at least one measure of accuracy (such as sensitivity, specificity, predictive values, or AUC) | P6 L2 |
| Abstract | 2 | Structured summary of study design, methods, results, and conclusions | P2 |
| Introduction | 3 | Scientific and clinical background, including the intended use and clinical role of the index test | P4 |
| 4 | Study objectives and hypotheses | P5 L9 | |
| Methods | |||
|
| 5 | Whether data collection was planned before the index test and reference standard were performed (prospective study) or after (retrospective study) | P7 L5 |
|
| 6 | Eligibility criteria | P7 L5 |
| 7 | On what basis potentially eligible participants were identified (such as symptoms, results from previous tests, inclusion in registry) | P7 L5 | |
| 8 | Where and when potentially eligible participants were identified (setting, location and dates) | P7 L5 | |
| 9 | Whether participants formed a consecutive, random or convenience series | P7 L5 | |
|
| 10a | Index test, in sufficient detail to allow replication | P8 L13 |
| 10b | Reference standard, in sufficient detail to allow replication | P7 L10 | |
| 11 | Rationale for choosing the reference standard (if alternatives exist) | P8 L13 | |
| 12a | Definition of and rationale for test positivity cut-offs or result categories of the index test, distinguishing pre-specified from exploratory | P8 19 | |
| 12b | Definition of and rationale for test positivity cut-offs or result categories of the reference standard, distinguishing pre-specified from exploratory | P8 L19 | |
| 13a | Whether clinical information and reference standard results were available to the performers/readers of the index test | P8 L19 | |
| 13b | Whether clinical information and index test results were available to the assessors of the reference standard | P8 L20 | |
| 14 | Methods for estimating or comparing measures of diagnostic accuracy | P9 L3 | |
| 15 | How indeterminate index test or reference standard results were handled | N/A | |
| 16 | How missing data on the index test and reference standard were handled | N/A | |
| 17 | Any analyses of variability in diagnostic accuracy, distinguishing pre-specified from exploratory | N/A | |
| 18 | Intended sample size and how it was determined | N/A | |
| Results | |||
|
| 19 | Flow of participants, using a diagram | Fig. |
| 20 | Baseline demographic and clinical characteristics of participants | N/A | |
| 21a | Distribution of severity of disease in those with the target condition | N/A | |
| 21b | Distribution of alternative diagnoses in those without the target condition | P11 L21 | |
| 22 | Time interval and any clinical interventions between index test and reference standard | N/A | |
|
| 23 | Cross tabulation of the index test results (or their distribution) by the results of the reference standard | Tables |
| 24 | Estimates of diagnostic accuracy and their precision (such as 95% confidence intervals) | Tables | |
| 25 | Any adverse events from performing the index test or the reference standard | ||
| Discussion | |||
| 26 | Study limitations, including sources of potential bias, statistical uncertainty, and generalisability | P15 L19 | |
| 27 | Implications for practice, including the intended use and clinical role of the index test | P17 L3 | |
| Other Information | 28 | Registration number and name of registry | N/A |
| 29 | Where the full study protocol can be accessed | P17 L8 | |
| 30 | Sources of funding and other support; role of funders | P17 L8 | |