Literature DB >> 28480476

The Role of Free/Libre and Open Source Software in Learning Health Systems.

C Paton, T Karopka.   

Abstract

Objective: To give an overview of the role of Free/Libre and Open Source Software (FLOSS) in the context of secondary use of patient data to enable Learning Health Systems (LHSs).
Methods: We conducted an environmental scan of the academic and grey literature utilising the MedFLOSS database of open source systems in healthcare to inform a discussion of the role of open source in developing LHSs that reuse patient data for research and quality improvement.
Results: A wide range of FLOSS is identified that contributes to the information technology (IT) infrastructure of LHSs including operating systems, databases, frameworks, interoperability software, and mobile and web apps. The recent literature around the development and use of key clinical data management tools is also reviewed. Conclusions: FLOSS already plays a critical role in modern health IT infrastructure for the collection, storage, and analysis of patient data. The nature of FLOSS systems to be collaborative, modular, and modifiable may make open source approaches appropriate for building the digital infrastructure for a LHS. Georg Thieme Verlag KG Stuttgart.

Entities:  

Mesh:

Year:  2017        PMID: 28480476      PMCID: PMC6239249          DOI: 10.15265/IY-2017-006

Source DB:  PubMed          Journal:  Yearb Med Inform        ISSN: 0943-4747


  33 in total

1.  A Nursing Intelligence System to Support Secondary Use of Nursing Routine Data.

Authors:  W O Hackl; F Rauchegger; E Ammenwerth
Journal:  Appl Clin Inform       Date:  2015-06-24       Impact factor: 2.342

2.  Unlocking Data for Clinical Research - The German i2b2 Experience.

Authors:  T Ganslandt; S Mate; K Helbing; U Sax; H U Prokosch
Journal:  Appl Clin Inform       Date:  2011-03-30       Impact factor: 2.342

3.  Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences.

Authors:  Jeremy Goecks; Anton Nekrutenko; James Taylor
Journal:  Genome Biol       Date:  2010-08-25       Impact factor: 13.583

4.  The social licence for research: why care.data ran into trouble.

Authors:  Pam Carter; Graeme T Laurie; Mary Dixon-Woods
Journal:  J Med Ethics       Date:  2015-01-23       Impact factor: 2.903

5.  BigQ: a NoSQL based framework to handle genomic variants in i2b2.

Authors:  Matteo Gabetta; Ivan Limongelli; Ettore Rizzo; Alberto Riva; Daniele Segagni; Riccardo Bellazzi
Journal:  BMC Bioinformatics       Date:  2015-12-29       Impact factor: 3.169

6.  SMART-on-FHIR implemented over i2b2.

Authors:  Kavishwar B Wagholikar; Joshua C Mandel; Jeffery G Klann; Nich Wattanasin; Michael Mendis; Christopher G Chute; Kenneth D Mandl; Shawn N Murphy
Journal:  J Am Med Inform Assoc       Date:  2017-03-01       Impact factor: 4.497

7.  Health care transformation through collaboration on open-source informatics projects: integrating a medical applications platform, research data repository, and patient summarization.

Authors:  Jeffrey G Klann; Allison B McCoy; Adam Wright; Nich Wattanasin; Dean F Sittig; Shawn N Murphy
Journal:  Interact J Med Res       Date:  2013-05-30

8.  tranSMART: An Open Source and Community-Driven Informatics and Data Sharing Platform for Clinical and Translational Research.

Authors:  Brian D Athey; Michael Braxenthaler; Magali Haas; Yike Guo
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2013-03-18

9.  Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases.

Authors:  Venkata Satagopam; Wei Gu; Serge Eifes; Piotr Gawron; Marek Ostaszewski; Stephan Gebel; Adriano Barbosa-Silva; Rudi Balling; Reinhard Schneider
Journal:  Big Data       Date:  2016-06       Impact factor: 2.128

10.  MINERVA-a platform for visualization and curation of molecular interaction networks.

Authors:  Piotr Gawron; Marek Ostaszewski; Venkata Satagopam; Stephan Gebel; Alexander Mazein; Michal Kuzma; Simone Zorzan; Fintan McGee; Benoît Otjacques; Rudi Balling; Reinhard Schneider
Journal:  NPJ Syst Biol Appl       Date:  2016-09-22
View more
  3 in total

1.  Infobuttons for Genomic Medicine: Requirements and Barriers.

Authors:  Luke V Rasmussen; John J Connolly; Guilherme Del Fiol; Robert R Freimuth; Douglas B Pet; Josh F Peterson; Brian H Shirts; Justin B Starren; Marc S Williams; Nephi Walton; Casey Overby Taylor
Journal:  Appl Clin Inform       Date:  2021-05-12       Impact factor: 2.342

2.  The Privacy and Security Implications of Open Data in Healthcare.

Authors:  Shinji Kobayashi; Thomas B Kane; Chris Paton
Journal:  Yearb Med Inform       Date:  2018-04-22

Review 3.  Digital Health Policy and Programs for Hospital Care in Vietnam: Scoping Review.

Authors:  Duc Minh Tran; C Louise Thwaites; Jennifer Ilo Van Nuil; Jacob McKnight; An Phuoc Luu; Chris Paton
Journal:  J Med Internet Res       Date:  2022-02-09       Impact factor: 5.428

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.