Literature DB >> 28478508

Deciphering the Biochemical Pathway and Pharmacokinetic Study of Amyloid βeta-42 with Superparamagnetic Iron Oxide Nanoparticles (SPIONs) Using Systems Biology Approach.

Aman Chandra Kaushik1,2, Ajay Kumar3, Vivek Dhar Dwivedi4, Shiv Bharadwaj5, Sanjay Kumar6, Kritika Bharti7, Pavan Kumar1, Ravi Kumar Chaudhary8, Sarad Kumar Mishra9.   

Abstract

Alzheimer's disease (AD) pathogenesis leads to the appearance of senile plaques due to the production and deposition of the β-amyloid peptide (Aβ). Superparamagnetic iron oxide nanoparticles (SPIONs) have potential role in the detection and imaging of Aβ plaques in AD. SPIONs have shown appropriate potential in the diagnosis and treatment of AD. In the present study, the pharmacokinetics of SPIONs and its effect in the biochemical pathway of AD were analyzed using collected information. During analysis, the interaction of SPIONs with amyloid beta-42 (Aβ42), a biomarker for AD progression, has been shown. Nodes represent the entities and edges represent the relation (interactions) of one node to another node. Aβ42 and their interaction with other entities making up biochemical network are involved in AD mechanism in presence of SPION. The kinetic simulation was done to investigate pharmacokinetics of SPIONs for AD, where concentration was assigned of nanoparticles and other entities were applied as a kinetic irreversible simple Michaelis-Menten or mass action kinetics. Simulation was done in presence and absence of SPIONs to investigate pharmacokinetic effect in AD and explore the mechanism of Aβ42 in presence of SPIONs. This study may lead to better understanding, which is required to target the metabolism of Aß42 peptide, a pivotal player in this pathology.

Entities:  

Keywords:  Alzheimer’s disease; Amyloid beta-42; Biochemical network; Pharmacokinetics; SPIONs

Mesh:

Substances:

Year:  2017        PMID: 28478508     DOI: 10.1007/s12035-017-0546-y

Source DB:  PubMed          Journal:  Mol Neurobiol        ISSN: 0893-7648            Impact factor:   5.590


  92 in total

1.  A gene expression profile of Alzheimer's disease.

Authors:  J F Loring; X Wen; J M Lee; J Seilhamer; R Somogyi
Journal:  DNA Cell Biol       Date:  2001-11       Impact factor: 3.311

2.  Calpain and caspase processing of caspase-12 contribute to the ER stress-induced cell death pathway in differentiated PC12 cells.

Authors:  Juan A Martinez; Zhiqun Zhang; Stanislav I Svetlov; Ronald L Hayes; Kevin K Wang; Stephen F Larner
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3.  Prediction of Absolute Solvation Free Energies using Molecular Dynamics Free Energy Perturbation and the OPLS Force Field.

Authors:  Devleena Shivakumar; Joshua Williams; Yujie Wu; Wolfgang Damm; John Shelley; Woody Sherman
Journal:  J Chem Theory Comput       Date:  2010-04-14       Impact factor: 6.006

4.  Inflammatory response after ischemic stroke: a USPIO-enhanced MRI study in patients.

Authors:  Norbert Nighoghossian; Marlène Wiart; Serkan Cakmak; Yves Berthezène; Laurent Derex; Tae-Hee Cho; Chantal Nemoz; François Chapuis; Guy-Louis Tisserand; Jean-Baptiste Pialat; Paul Trouillas; Jean-Claude Froment; Marc Hermier
Journal:  Stroke       Date:  2006-12-14       Impact factor: 7.914

5.  Boolean network model for GPR142 against Type 2 diabetes and relative dynamic change ratio analysis using systems and biological circuits approach.

Authors:  Aman Chandra Kaushik; Shakti Sahi
Journal:  Syst Synth Biol       Date:  2015-03-14

6.  Design, synthesis and evaluation of novel ferulic acid-O-alkylamine derivatives as potential multifunctional agents for the treatment of Alzheimer's disease.

Authors:  Zhipei Sang; Wanli Pan; Keren Wang; Qinge Ma; Lintao Yu; Yan Yang; Ping Bai; Chaoliang Leng; Qian Xu; Xiaoqing Li; Zhenghuai Tan; Wenmin Liu
Journal:  Eur J Med Chem       Date:  2017-02-20       Impact factor: 6.514

7.  Amyloid plaque and neurofibrillary tangle pathology in a regulatable mouse model of Alzheimer's disease.

Authors:  Jennifer B Paulson; Martin Ramsden; Colleen Forster; Mathew A Sherman; Eileen McGowan; Karen H Ashe
Journal:  Am J Pathol       Date:  2008-07-31       Impact factor: 4.307

8.  Depletion of GGA3 stabilizes BACE and enhances beta-secretase activity.

Authors:  Giuseppina Tesco; Young Ho Koh; Eugene L Kang; Andrew N Cameron; Shinjita Das; Miguel Sena-Esteves; Mikko Hiltunen; Shao-Hua Yang; Zhenyu Zhong; Yong Shen; James W Simpkins; Rudolph E Tanzi
Journal:  Neuron       Date:  2007-06-07       Impact factor: 17.173

9.  Modular architecture of metabolic pathways revealed by conserved sequences of reactions.

Authors:  Ai Muto; Masaaki Kotera; Toshiaki Tokimatsu; Zenichi Nakagawa; Susumu Goto; Minoru Kanehisa
Journal:  J Chem Inf Model       Date:  2013-02-19       Impact factor: 4.956

10.  Potential applications of magnetic particles to detect and treat Alzheimer's disease.

Authors:  Maria Antònia Busquets; Raimon Sabaté; Joan Estelrich
Journal:  Nanoscale Res Lett       Date:  2014-10-01       Impact factor: 4.703

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  5 in total

Review 1.  Nanotheranostic Applications for Detection and Targeting Neurodegenerative Diseases.

Authors:  Ajay Kumar; Ravi Kumar Chaudhary; Rachita Singh; Satya P Singh; Shao-Yu Wang; Zheng-Yu Hoe; Cheng-Tang Pan; Yow-Ling Shiue; Dong-Qing Wei; Aman Chandra Kaushik; Xiaofeng Dai
Journal:  Front Neurosci       Date:  2020-04-30       Impact factor: 4.677

2.  Designing of CD8+ and CD8+-overlapped CD4+ epitope vaccine by targeting late and early proteins of human papillomavirus.

Authors:  Satyavani Kaliamurthi; Gurudeeban Selvaraj; Aman Chandra Kaushik; Ke-Ren Gu; Dong-Qing Wei
Journal:  Biologics       Date:  2018-10-02

3.  A comparative chemogenic analysis for predicting Drug-Target Pair via Machine Learning Approaches.

Authors:  Aman Chandra Kaushik; Aamir Mehmood; Xiaofeng Dai; Dong-Qing Wei
Journal:  Sci Rep       Date:  2020-04-22       Impact factor: 4.379

4.  Homing of Super Paramagnetic Iron Oxide Nanoparticles (SPIONs) Labeled Adipose-Derived Stem Cells by Magnetic Attraction in a Rat Model of Parkinson's Disease.

Authors:  Ardeshir Moayeri; Marzieh Darvishi; Mansour Amraei
Journal:  Int J Nanomedicine       Date:  2020-02-26

5.  Evaluation of anti-EGFR-iRGD recombinant protein with GOLD nanoparticles: synergistic effect on antitumor efficiency using optimized deep neural networks.

Authors:  Aman Chandra Kaushik; Yan-Jing Wang; Xiangeng Wang; Ajay Kumar; Satya P Singh; Cheng-Tang Pan; Yow-Ling Shiue; Dong-Qing Wei
Journal:  RSC Adv       Date:  2019-06-19       Impact factor: 4.036

  5 in total

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