Literature DB >> 28466157

Liquid biopsy: unlocking the potentials of cell-free DNA.

David Chu1, Ben Ho Park2,3.   

Abstract

Circulating tumor DNA (ctDNA) has garnered much excitement over the past few years for its potential clinical utility as a surrogate for tumor biopsies in early cancer detection and prognosis. Numerous studies have demonstrated that ctDNA is shed into the circulation and is elevated in disease states such as cancer. Despite the low levels of ctDNA in the "sea" of normal DNA, advances in next generation sequencing (NGS) and digital polymerase chain reaction (PCR) technologies have led to dramatic improvements in variant detection sensitivity and specificity. These technologies allow the quantification of ctDNA, providing both prognostic and predictive information. Here, we review the history of cell-free DNA and different technologies for the detection of ctDNA in cancer and describe the different modalities for using ctDNA in clinical oncology.

Entities:  

Keywords:  Breast cancer; Circulating tumor DNA; Mutation; Plasma tumor DNA

Mesh:

Substances:

Year:  2017        PMID: 28466157     DOI: 10.1007/s00428-017-2137-8

Source DB:  PubMed          Journal:  Virchows Arch        ISSN: 0945-6317            Impact factor:   4.064


  67 in total

1.  Noninvasive identification and monitoring of cancer mutations by targeted deep sequencing of plasma DNA.

Authors:  Tim Forshew; Muhammed Murtaza; Christine Parkinson; Davina Gale; Dana W Y Tsui; Fiona Kaper; Sarah-Jane Dawson; Anna M Piskorz; Mercedes Jimenez-Linan; David Bentley; James Hadfield; Andrew P May; Carlos Caldas; James D Brenton; Nitzan Rosenfeld
Journal:  Sci Transl Med       Date:  2012-05-30       Impact factor: 17.956

2.  Mutation tracking in circulating tumor DNA predicts relapse in early breast cancer.

Authors:  Isaac Garcia-Murillas; Gaia Schiavon; Britta Weigelt; Charlotte Ng; Sarah Hrebien; Rosalind J Cutts; Maggie Cheang; Peter Osin; Ashutosh Nerurkar; Iwanka Kozarewa; Javier Armisen Garrido; Mitch Dowsett; Jorge S Reis-Filho; Ian E Smith; Nicholas C Turner
Journal:  Sci Transl Med       Date:  2015-08-26       Impact factor: 17.956

Review 3.  Circulating cell free DNA: Preanalytical considerations.

Authors:  Safia El Messaoudi; Fanny Rolet; Florent Mouliere; Alain R Thierry
Journal:  Clin Chim Acta       Date:  2013-05-30       Impact factor: 3.786

4.  Nucleic acids spontaneously released by living frog auricles.

Authors:  M Stroun; P Anker
Journal:  Biochem J       Date:  1972-07       Impact factor: 3.857

5.  CA 125 half-life and CA 125 nadir during induction chemotherapy are independent predictors of epithelial ovarian cancer outcome: results of a French multicentric study.

Authors:  J M Riedinger; J Wafflart; G Ricolleau; N Eche; H Larbre; J P Basuyau; I Dalifard; K Hacene; M F Pichon
Journal:  Ann Oncol       Date:  2006-06-09       Impact factor: 32.976

6.  Screening for epidermal growth factor receptor mutations in lung cancer.

Authors:  Rafael Rosell; Teresa Moran; Cristina Queralt; Rut Porta; Felipe Cardenal; Carlos Camps; Margarita Majem; Guillermo Lopez-Vivanco; Dolores Isla; Mariano Provencio; Amelia Insa; Bartomeu Massuti; Jose Luis Gonzalez-Larriba; Luis Paz-Ares; Isabel Bover; Rosario Garcia-Campelo; Miguel Angel Moreno; Silvia Catot; Christian Rolfo; Noemi Reguart; Ramon Palmero; José Miguel Sánchez; Roman Bastus; Clara Mayo; Jordi Bertran-Alamillo; Miguel Angel Molina; Jose Javier Sanchez; Miquel Taron
Journal:  N Engl J Med       Date:  2009-08-19       Impact factor: 91.245

7.  Plasma DNA as a marker of cancerous cell death. Investigations in patients suffering from lung cancer and in nude mice bearing human tumours.

Authors:  G J Fournié; J P Courtin; F Laval; J J Chalé; J P Pourrat; M C Pujazon; D Lauque; P Carles
Journal:  Cancer Lett       Date:  1995-05-08       Impact factor: 8.679

8.  Sensitive Detection of Mono- and Polyclonal ESR1 Mutations in Primary Tumors, Metastatic Lesions, and Cell-Free DNA of Breast Cancer Patients.

Authors:  Peilu Wang; Amir Bahreini; Rekha Gyanchandani; Peter C Lucas; Ryan J Hartmaier; Rebecca J Watters; Amruth R Jonnalagadda; Humberto E Trejo Bittar; Aaron Berg; Ronald L Hamilton; Brenda F Kurland; Kurt R Weiss; Aju Mathew; Jose Pablo Leone; Nancy E Davidson; Marina N Nikiforova; Adam M Brufsky; Tadeu F Ambros; Andrew M Stern; Shannon L Puhalla; Adrian V Lee; Steffi Oesterreich
Journal:  Clin Cancer Res       Date:  2015-10-23       Impact factor: 12.531

9.  The genomic landscapes of human breast and colorectal cancers.

Authors:  Laura D Wood; D Williams Parsons; Siân Jones; Jimmy Lin; Tobias Sjöblom; Rebecca J Leary; Dong Shen; Simina M Boca; Thomas Barber; Janine Ptak; Natalie Silliman; Steve Szabo; Zoltan Dezso; Vadim Ustyanksky; Tatiana Nikolskaya; Yuri Nikolsky; Rachel Karchin; Paul A Wilson; Joshua S Kaminker; Zemin Zhang; Randal Croshaw; Joseph Willis; Dawn Dawson; Michail Shipitsin; James K V Willson; Saraswati Sukumar; Kornelia Polyak; Ben Ho Park; Charit L Pethiyagoda; P V Krishna Pant; Dennis G Ballinger; Andrew B Sparks; James Hartigan; Douglas R Smith; Erick Suh; Nickolas Papadopoulos; Phillip Buckhaults; Sanford D Markowitz; Giovanni Parmigiani; Kenneth W Kinzler; Victor E Velculescu; Bert Vogelstein
Journal:  Science       Date:  2007-10-11       Impact factor: 47.728

10.  Circulating tumour DNA profiling reveals heterogeneity of EGFR inhibitor resistance mechanisms in lung cancer patients.

Authors:  Jacob J Chabon; Andrew D Simmons; Alexander F Lovejoy; Mohammad S Esfahani; Aaron M Newman; Henry J Haringsma; David M Kurtz; Henning Stehr; Florian Scherer; Chris A Karlovich; Thomas C Harding; Kathleen A Durkin; Gregory A Otterson; W Thomas Purcell; D Ross Camidge; Jonathan W Goldman; Lecia V Sequist; Zofia Piotrowska; Heather A Wakelee; Joel W Neal; Ash A Alizadeh; Maximilian Diehn
Journal:  Nat Commun       Date:  2016-06-10       Impact factor: 14.919

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  15 in total

Review 1.  What is the potential of nanolock- and nanocross-nanopore technology in cancer diagnosis?

Authors:  Li-Qun Gu; Kent S Gates; Michael X Wang; Guangfu Li
Journal:  Expert Rev Mol Diagn       Date:  2017-12-01       Impact factor: 5.225

2.  Identifying pancreatic cancer-associated miRNAs using weighted gene co-expression network analysis.

Authors:  Pengfei Lyu; Zhengwen Hao; Haoruo Zhang; Jun Li
Journal:  Oncol Lett       Date:  2022-07-05       Impact factor: 3.111

3.  Susan G. Komen Big Data for Breast Cancer Initiative: How Patient Advocacy Organizations Can Facilitate Using Big Data to Improve Patient Outcomes.

Authors:  Jerome Jourquin; Stephanie Birkey Reffey; Cheryl Jernigan; Mia Levy; Glendon Zinser; Kimberly Sabelko; Jennifer Pietenpol; George Sledge
Journal:  JCO Precis Oncol       Date:  2019-09-12

Review 4.  Blood-based biomarkers for the diagnosis and monitoring of gliomas.

Authors:  Marcus A Zachariah; Joao Paulo Oliveira-Costa; Bob S Carter; Shannon L Stott; Brian V Nahed
Journal:  Neuro Oncol       Date:  2018-08-02       Impact factor: 12.300

5.  Distinct mRNAs in Cancer Extracellular Vesicles Activate Angiogenesis and Alter Transcriptome of Vascular Endothelial Cells.

Authors:  Pan Zhang; Su Bin Lim; Kuan Jiang; Ti Weng Chew; Boon Chuan Low; Chwee Teck Lim
Journal:  Cancers (Basel)       Date:  2021-04-22       Impact factor: 6.639

Review 6.  Liquid Biopsy and Therapeutic Targets: Present and Future Issues in Thoracic Oncology.

Authors:  Paul Hofman
Journal:  Cancers (Basel)       Date:  2017-11-10       Impact factor: 6.639

Review 7.  ALK Status Assessment with Liquid Biopsies of Lung Cancer Patients.

Authors:  Paul Hofman
Journal:  Cancers (Basel)       Date:  2017-08-12       Impact factor: 6.639

8.  Secondary Germline Finding in Liquid Biopsy of a Deceased Patient; Case Report and Review of the Literature.

Authors:  Maedah Veyseh; Charite Ricker; Carin Espenschied; Victoria Raymond; Anishka D'Souza; Afsaneh Barzi
Journal:  Front Oncol       Date:  2018-07-09       Impact factor: 6.244

9.  Digital polymerase chain reaction for detecting c-MYC copy number gain in tissue and cell-free plasma samples of colorectal cancer patients.

Authors:  Kyu Sang Lee; Soo Kyung Nam; Soo Hyun Seo; Kyoung Un Park; Heung-Kwon Oh; Duck-Woo Kim; Sung-Bum Kang; Woo Ho Kim; Hye Seung Lee
Journal:  Sci Rep       Date:  2019-02-07       Impact factor: 4.379

10.  Update on the types and usage of liquid biopsies in the clinical setting: a systematic review.

Authors:  Borros Arneth
Journal:  BMC Cancer       Date:  2018-05-04       Impact factor: 4.430

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