Literature DB >> 28458112

DNAzyme sensors for detection of metal ions in the environment and imaging them in living cells.

Claire E McGhee1, Kang Yong Loh1, Yi Lu2.   

Abstract

The on-site and real-time detection of metal ions is important for environmental monitoring and for understanding the impact of metal ions on human health. However, developing sensors selective for a wide range of metal ions that can work in the complex matrices of untreated samples and cells presents significant challenges. To meet these challenges, DNAzymes, an emerging class of metal ion-dependent enzymes selective for almost any metal ion, have been functionalized with fluorophores, nanoparticles and other imaging agents and incorporated into sensors for the detection of metal ions in environmental samples and for imaging metal ions in living cells. Herein, we highlight the recent developments of DNAzyme-based fluorescent, colorimetric, SERS, electrochemical and electrochemiluminscent sensors for metal ions for these applications.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28458112      PMCID: PMC5503749          DOI: 10.1016/j.copbio.2017.03.002

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  74 in total

1.  Ultra-sensitive and absolute quantitative detection of Cu2+ based on DNAzyme and digital PCR in water and drink samples.

Authors:  Pengyu Zhu; Ying Shang; Wenying Tian; Kunlun Huang; Yunbo Luo; Wentao Xu
Journal:  Food Chem       Date:  2016-10-24       Impact factor: 7.514

2.  A sensitive SERS assay of L-histidine via a DNAzyme-activated target recycling cascade amplification strategy.

Authors:  Sujuan Ye; Yuanyuan Guo; Jie Xiao; Shusheng Zhang
Journal:  Chem Commun (Camb)       Date:  2013-03-25       Impact factor: 6.222

Review 3.  Electrochemical sensing of heavy metal ions with inorganic, organic and bio-materials.

Authors:  Lin Cui; Jie Wu; Huangxian Ju
Journal:  Biosens Bioelectron       Date:  2014-07-28       Impact factor: 10.618

4.  A Silver DNAzyme.

Authors:  Runjhun Saran; Juewen Liu
Journal:  Anal Chem       Date:  2016-03-24       Impact factor: 6.986

5.  Dual-color encoded DNAzyme nanostructures for multiplexed detection of intracellular metal ions in living cells.

Authors:  Wenjiao Zhou; Wenbing Liang; Daxiu Li; Ruo Yuan; Yun Xiang
Journal:  Biosens Bioelectron       Date:  2016-05-19       Impact factor: 10.618

6.  Paper-based biosensor relying on flower-like reduced graphene guided enzymatically deposition of polyaniline for Pb(2+) detection.

Authors:  Shenguang Ge; Kaiqing Wu; Yan Zhang; Mei Yan; Jinghua Yu
Journal:  Biosens Bioelectron       Date:  2016-01-29       Impact factor: 10.618

7.  A DNA enzyme with Mg(2+)-dependent RNA phosphoesterase activity.

Authors:  R R Breaker; G F Joyce
Journal:  Chem Biol       Date:  1995-10

8.  In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme.

Authors:  J Li; W Zheng; A H Kwon; Y Lu
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

9.  Postsynthetic Modification of DNA Phosphodiester Backbone for Photocaged DNAzyme.

Authors:  Xiaoyan Wang; Mengli Feng; Lu Xiao; Aijun Tong; Yu Xiang
Journal:  ACS Chem Biol       Date:  2015-12-16       Impact factor: 5.100

10.  Biostable L-DNAzyme for Sensing of Metal Ions in Biological Systems.

Authors:  Liang Cui; Ruizi Peng; Ting Fu; Xiaobing Zhang; Cuichen Wu; Huapei Chen; Hao Liang; Chaoyong James Yang; Weihong Tan
Journal:  Anal Chem       Date:  2016-01-15       Impact factor: 6.986

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  21 in total

Review 1.  Metal-Dependent DNAzymes for the Quantitative Detection of Metal Ions in Living Cells: Recent Progress, Current Challenges, and Latest Results on FRET Ratiometric Sensors.

Authors:  Kevin Hwang; Quanbing Mou; Ryan J Lake; Mengyi Xiong; Brandalynn Holland; Yi Lu
Journal:  Inorg Chem       Date:  2019-07-31       Impact factor: 5.165

Review 2.  Bioapplications of DNA nanotechnology at the solid-liquid interface.

Authors:  Wenjing Wang; Sha Yu; Shan Huang; Sai Bi; Heyou Han; Jian-Rong Zhang; Yi Lu; Jun-Jie Zhu
Journal:  Chem Soc Rev       Date:  2019-09-16       Impact factor: 54.564

3.  Optical Control of Metal Ion Probes in Cells and Zebrafish Using Highly Selective DNAzymes Conjugated to Upconversion Nanoparticles.

Authors:  Zhenglin Yang; Kang Yong Loh; Yueh-Te Chu; Ruopei Feng; Nitya Sai Reddy Satyavolu; Mengyi Xiong; Stephanie M Nakamata Huynh; Kevin Hwang; Lele Li; Hang Xing; Xiaobing Zhang; Yann R Chemla; Martin Gruebele; Yi Lu
Journal:  J Am Chem Soc       Date:  2018-12-04       Impact factor: 15.419

4.  Entropy-driven catalytic reaction-induced hairpin structure switching for fluorometric detection of uranyl ions.

Authors:  Wen Yun; Lin Chen; Zao Yi; Yong Yi; Yongjian Tang; Lizhu Yang
Journal:  Mikrochim Acta       Date:  2019-08-28       Impact factor: 5.833

5.  DNAzyme-Mediated Genetically Encoded Sensors for Ratiometric Imaging of Metal Ions in Living Cells.

Authors:  Mengyi Xiong; Zhenglin Yang; Ryan J Lake; Junjie Li; Shanni Hong; Huanhuan Fan; Xiao-Bing Zhang; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2019-12-18       Impact factor: 15.336

Review 6.  Functional DNA Molecules Enable Selective and Stimuli-Responsive Nanoparticles for Biomedical Applications.

Authors:  Lele Li; Hang Xing; Jingjing Zhang; Yi Lu
Journal:  Acc Chem Res       Date:  2019-08-14       Impact factor: 22.384

Review 7.  DNAzymes as Activity-Based Sensors for Metal Ions: Recent Applications, Demonstrated Advantages, Current Challenges, and Future Directions.

Authors:  Ryan J Lake; Zhenglin Yang; JingJing Zhang; Yi Lu
Journal:  Acc Chem Res       Date:  2019-11-13       Impact factor: 22.384

8.  Fluorometric determination of RNase H via a DNAzyme conjugated to reduced graphene oxide, and its application to screening for inhibitors and activators.

Authors:  Chunyi Tong; Ting Zhou; Chuan Zhao; Liqun Yuan; Ying Xu; Bin Liu; Jialong Fan; Dan Li; Aiguo Zhu
Journal:  Mikrochim Acta       Date:  2019-05-07       Impact factor: 5.833

9.  Evidence of a General Acid-Base Catalysis Mechanism in the 8-17 DNAzyme.

Authors:  Marjorie Cepeda-Plaza; Claire E McGhee; Yi Lu
Journal:  Biochemistry       Date:  2018-02-19       Impact factor: 3.162

10.  Biocomputing for Portable, Resettable, and Quantitative Point-of-Care Diagnostics: Making the Glucose Meter a Logic-Gate Responsive Device for Measuring Many Clinically Relevant Targets.

Authors:  Jingjing Zhang; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2018-07-09       Impact factor: 15.336

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