Literature DB >> 28458096

Selective adaptor dependent protein degradation in bacteria.

Nathan J Kuhlmann1, Peter Chien2.   

Abstract

Energy dependent proteolysis is essential for all life, but uncontrolled degradation leads to devastating consequences. In bacteria, oligomeric AAA+ proteases are responsible for controlling protein destruction and are regulated in part by adaptor proteins. Adaptors are regulatory factors that shape protease substrate choice by either restricting or enhancing substrate recognition in several ways. In some cases, protease activity or assembly itself requires adaptor binding. Adaptors can also alter specificity by acting as scaffolds to tether particular substrates to already active proteases. Finally, hierarchical assembly of adaptors can use combinations of several activities to enhance the protease's selectivity. Because the lifetime of the constituent proteins directly affects the duration of a particular signaling pathway, regulated proteolysis impacts almost all cellular responses. In this review, we describe recent progress in regulated protein degradation, focusing on fundamental principles of adaptors and how they perform critical biological functions, such as promoting cell cycle progression and quality control.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28458096      PMCID: PMC5534377          DOI: 10.1016/j.mib.2017.03.013

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  69 in total

1.  Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis.

Authors:  J M Flynn; I Levchenko; M Seidel; S H Wickner; R T Sauer; T A Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-09-04       Impact factor: 11.205

2.  A MecA paralog, YpbH, binds ClpC, affecting both competence and sporulation.

Authors:  Marjan Persuh; Ines Mandic-Mulec; David Dubnau
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

3.  MecA, an adaptor protein necessary for ClpC chaperone activity.

Authors:  Tilman Schlothauer; Axel Mogk; David A Dougan; Bernd Bukau; Kürşad Turgay
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-21       Impact factor: 11.205

4.  Engineering controllable protein degradation.

Authors:  Kathleen E McGinness; Tania A Baker; Robert T Sauer
Journal:  Mol Cell       Date:  2006-06-09       Impact factor: 17.970

5.  A dynamically localized protease complex and a polar specificity factor control a cell cycle master regulator.

Authors:  Patrick T McGrath; Antonio A Iniesta; Kathleen R Ryan; Lucy Shapiro; Harley H McAdams
Journal:  Cell       Date:  2006-02-10       Impact factor: 41.582

6.  McsB is a protein arginine kinase that phosphorylates and inhibits the heat-shock regulator CtsR.

Authors:  Jakob Fuhrmann; Andreas Schmidt; Silvia Spiess; Anita Lehner; Kürsad Turgay; Karl Mechtler; Emmanuelle Charpentier; Tim Clausen
Journal:  Science       Date:  2009-06-05       Impact factor: 47.728

7.  The tyrosine kinase McsB is a regulated adaptor protein for ClpCP.

Authors:  Janine Kirstein; David A Dougan; Ulf Gerth; Michael Hecker; Kürşad Turgay
Journal:  EMBO J       Date:  2007-03-22       Impact factor: 11.598

8.  A NAD-dependent glutamate dehydrogenase coordinates metabolism with cell division in Caulobacter crescentus.

Authors:  François Beaufay; Jérôme Coppine; Aurélie Mayard; Géraldine Laloux; Xavier De Bolle; Régis Hallez
Journal:  EMBO J       Date:  2015-05-07       Impact factor: 11.598

9.  The mcsB gene of the clpC operon is required for stress tolerance and virulence in Staphylococcus aureus.

Authors:  Darren J Wozniak; Kiran B Tiwari; Rami Soufan; Radheshyam K Jayaswal
Journal:  Microbiology (Reading)       Date:  2012-08-17       Impact factor: 2.777

10.  Sequential recognition of two distinct sites in sigma(S) by the proteolytic targeting factor RssB and ClpX.

Authors:  Andrea Stüdemann; Marjolaine Noirclerc-Savoye; Eberhard Klauck; Gisela Becker; Dominique Schneider; Regine Hengge
Journal:  EMBO J       Date:  2003-08-15       Impact factor: 11.598

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  15 in total

1.  The C-Terminal Region of Bacillus subtilis SwrA Is Required for Activity and Adaptor-Dependent LonA Proteolysis.

Authors:  Anna C Hughes; Sundharraman Subramanian; Charles E Dann; Daniel B Kearns
Journal:  J Bacteriol       Date:  2018-02-23       Impact factor: 3.490

Review 2.  Trouble is coming: Signaling pathways that regulate general stress responses in bacteria.

Authors:  Susan Gottesman
Journal:  J Biol Chem       Date:  2019-06-13       Impact factor: 5.157

3.  Reduction in adaptor amounts establishes degradation hierarchy among protease substrates.

Authors:  Jinki Yeom; Xiaohui Gao; Eduardo A Groisman
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-23       Impact factor: 11.205

Review 4.  Using chemical inhibitors to probe AAA protein conformational dynamics and cellular functions.

Authors:  Jonathan B Steinman; Tarun M Kapoor
Journal:  Curr Opin Chem Biol       Date:  2019-03-23       Impact factor: 8.822

5.  Cargo competition for a dimerization interface restricts and stabilizes a bacterial protease adaptor.

Authors:  Nathan J Kuhlmann; Dylan Doxsey; Peter Chien
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-27       Impact factor: 11.205

Review 6.  AAA+ Machines of Protein Destruction in Mycobacteria.

Authors:  Adnan Ali H Alhuwaider; David A Dougan
Journal:  Front Mol Biosci       Date:  2017-07-19

Review 7.  Functional Diversity of AAA+ Protease Complexes in Bacillus subtilis.

Authors:  Alexander K W Elsholz; Marlene S Birk; Emmanuelle Charpentier; Kürşad Turgay
Journal:  Front Mol Biosci       Date:  2017-07-12

8.  Intricate Crosstalk Between Lipopolysaccharide, Phospholipid and Fatty Acid Metabolism in Escherichia coli Modulates Proteolysis of LpxC.

Authors:  Nikolas Thomanek; Jan Arends; Claudia Lindemann; Katalin Barkovits; Helmut E Meyer; Katrin Marcus; Franz Narberhaus
Journal:  Front Microbiol       Date:  2019-01-14       Impact factor: 5.640

9.  YjbH Requires Its Thioredoxin Active Motif for the Nitrosative Stress Response, Cell-to-Cell Spread, and Protein-Protein Interactions in Listeria monocytogenes.

Authors:  Brittany R Ruhland; Michelle L Reniere
Journal:  J Bacteriol       Date:  2020-05-27       Impact factor: 3.490

10.  Deficiency of MecA in Streptococcus mutans Causes Major Defects in Cell Envelope Biogenesis, Cell Division, and Biofilm Formation.

Authors:  Arpan De; Ashton N Jorgensen; Wandy L Beatty; Jose Lemos; Zezhang T Wen
Journal:  Front Microbiol       Date:  2018-09-11       Impact factor: 5.640

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