| Literature DB >> 28448618 |
Enbin Xu1, Hailian Cao1, Liming Lin1, Honglong Liu1.
Abstract
Previous studies have found that the polymorphisms of tumor necrosis factor-α induced protein 3 (TNFAIP3) were associated with several autoimmune diseases. However, the role of TNFAIP3 polymorphisms in type-1 autoimmune hepatitis (AIH-1) remained unclear. The present study aimed to clarify the association of TNFAIP3 polymorphisms with AIH-1 risk in a Chinese Han population. The TaqMan SNP genotyping assay was used to determine the distribution of TNFAIP3 polymorphisms in 432 AIH-1 patients and 500 healthy controls. The association of TNFAIP3 polymorphisms and clinical characteristic was further evaluated. Five TNFAIP3 polymorphisms (rs2230926, rs5029939, rs10499194, rs6920220, rs582757) were analyzed in the present study. No significant association could be observed between rs2230926, rs5029939, rs6920220, rs582757 and the susceptibility to AIH-1 in Chinese Han population. Compared with wild-type genotype CC at rs10499194, individuals carrying CT genotype had a significantly increased risk for developing AIH-1 (OR = 2.32, 95%CI 1.44-3.74). Under a dominant model, CT/TT carriers have a 140% increased risk of AIH-1 than CC carriers (OR = 2.40, 95%CI 1.50-3.87). The rs10499194 T allele was also found to be significantly associated with AIH-1 risk (OR = 2.41, 95%CI 1.51-3.82). In addition, higher serum ALT, AST levels and more common cirrhosis were observed in AIH-1 patients with T allele (CT/TT) than those with CC genotype. In conclusion, TNFAIP3 rs10499194 T allele and CT genotype were associated with an increased risk for AIH-1, suggesting rs10499194 polymorphism as a candidate of susceptibility locus to AIH-1.Entities:
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Year: 2017 PMID: 28448618 PMCID: PMC5407796 DOI: 10.1371/journal.pone.0176471
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Demographic and clinical characteristics of AIH-1 patients and normal controls.
| AIH-1 patients (N = 432) | Normal Controls (N = 500) | |
|---|---|---|
| Age (Years) | 44.3 ± 13.8 | 45.1 ± 12.7 |
| Gender (Male/Female) | 60/376 | 56/444 |
| Age at presentation (Years) | 41.3 ± 11.2 | |
| Concurrent immune disease | 66 (15.3) | |
| IAIHG Score | 16.4 ± 2.7 | |
| >15 (n, %) | 312 (72.2) | |
| 10–15 (n, %) | 120 (27.8) | |
| ALT (IU/L) | 326 ± 277 | 32 ± 8.5 |
| AST(IU/L) | 299 ± 275 | 24 ± 7.6 |
| Total Bilirubin (umol/L) | 48 ±65 | |
| ANA+ (n, %) | 310 (71.7) | |
| SMA+ (n, %) | 138 (31.9) | |
| ANA+/SMA+ (n, %) | 46 (10.6) | |
| LKM1+ or AMA+ (n, %) | 0 | |
| Cirrhosis at presentation (n, %) | 72 (16.6) |
IAIHG, International Autoimmune Hepatitis Group, only pretreatment scores were analyzed; ALT, alanine aminotransferase; AST, aspartate aminotransferase; SMA, smooth muscle antibodies; ANA, antinuclear antibodies; LKM1, liver-kidney microsomal 1 antibody; AMA, anti-mitochondrial antibody;
Genotype distribution and allele frequencies for TNFAIP3 gene polymorphisms in both AIH-1 patients and normal controls.
| Allele/Genotype | AIH-1 (n, %) | Controls | HWE | OR (95% CI) | P Value |
|---|---|---|---|---|---|
| rs2230926 | 0.407 | ||||
| T | 826 (95.6) | 952 (95.2) | (Reference) | ||
| G | 38 (4.4) | 48 (4.8) | 0.91 (0.59–1.41) | 0.74 | |
| TT | 396 (91.7) | 454 (90.8) | (Reference) | ||
| TG | 34 (7.8) | 44 (8.8) | 0.89 (0.56–1.41) | 0.63 | |
| GG | 2 (0.5) | 2 (0.4) | 1.15 (0.16–8.18) | 1.00 | |
| TG+GG | 36 (8.3) | 46 (9.2) | 0.90 (0.57–1.42) | 0.73 | |
| rs582757 | 0.214 | ||||
| T | 728 (84.3) | 832 (83.2) | (Reference) | ||
| C | 136 (15.7) | 168 (16.8) | 0.93 (0.72–1.18) | 0.57 | |
| TT | 312 (72.2) | 350 (70.0) | (Reference) | ||
| TC | 104 (24.1) | 132 (26.4) | 0.88 (0.66–1.19) | 0.45 | |
| CC | 16 (3.7) | 18 (3.6) | 0.99 (0.50–1.99) | 1.00 | |
| TC+CC | 120 (27.8) | 150 (30.0) | 0.90 (0.68–1.19) | 0.47 | |
| rs5029939 | 0.352 | ||||
| C | 818 (94.7) | 960 (96.0) | (Reference) | ||
| G | 46 (5.3) | 40 (4.0) | 1.35 (0.87–2.08) | 0.19 | |
| CC | 386 (89.4) | 460 (92.0) | (Reference) | ||
| CG | 46 (10.6) | 40 (8.0) | 1.37 (0.88–2.14) | 0.17 | |
| GG | 0 (0) | 0 (0) | NS | NA | |
| GG+CG | 46 (10.6) | 40 (8.0) | 1.37 (0.88–2.14) | 0.17 | |
| rs10499194 | 0.520 | ||||
| C | 808 (93.5) | 972 (97.2) | Reference | ||
| T | 56 (6.5) | 28 (2.8) | |||
| CC | 378 (87.5) | 472 (94.4) | Reference | ||
| CT | 52 (12.0) | 28 (5.6) | |||
| TT | 2 (0.5) | 0 (0) | NS | NA | |
| CT+TT | 54 (12.5) | 28 (5.6) | |||
| rs6920220 | 0.750 | ||||
| G | 726 (84.0) | 816 (81.6) | Reference | ||
| A | 138 (16.0) | 184 (18.4) | 0.84 (0.66–1.07) | 0.18 | |
| GG | 306 (70.8) | 334 (66.8) | Reference | ||
| GA | 114 (26.4) | 148 (29.6) | 0.84 (0.63–1.12) | 0.27 | |
| AA | 12 (2.8) | 18 (3.6) | 0.73 (0.35–1.54) | 0.46 | |
| GA+AA | 126 (29.2) | 166 (33.2) | 0.83 (0.63–1.10) | 0.20 |
Distribution of HLA-DR alleles between AIH-1 patients and normal controls.
| HLA-DR alleles | AIH-1 | Control | OR (95%CI) | P Value |
|---|---|---|---|---|
| HLA-DRB1*03:01 | 312 (36.1) | 237 (23.7) | 1.52 (1.26–1.85) | <0.01 |
| HLA-DRB1*04:05 | 69 (8.0) | 52 (5.2) | 1.54 (1.06–2.23) | <0.01 |
Among those patients with rs10499194 T allele, 20 are DRB1*03:01 and 7 are DRB1*04:05.
Association of rs10499194 genotypes with clinical characteristics of AIH-1 patients.
| CC | CT+TT | P Value | |
|---|---|---|---|
| Age (Years) | 44.6 ± 13.7 | 42.1 ± 14.2 | 0.21 |
| Gender (Male/Female) | 48/330 | 12/42 | 0.10 |
| Age at presentation (Years) | 41.4± 11.1 | 40.7± 12.3 | 0.67 |
| Concurrent immune disease | 59 | 7 | 0.84 |
| IAIHG Score | 16.3 ± 2.7 | 16.9 ± 3.3 | 0.14 |
| >15 (n, %) | 276 | 36 | 0.73 |
| 10–15 (n, %) | 102 | 18 | 0.45 |
| ALT (IU/L) | 293 ± 261 | 561 ± 279 | <0.01 |
| AST(IU/L) | 271 ± 263 | 498 ± 273 | <0.01 |
| Total Bilirubin (umol/L) | 47 ± 64 | 54 ± 70 | 0.46 |
| ANA+ (n, %) | 278 | 32 | 0.42 |
| SMA+ (n, %) | 120 | 18 | 0.88 |
| ANA+/SMA+ (n, %) | 39 | 7 | 0.64 |
| Cirrhosis at presentation (n, %) | 40 | 32 | <0.01 |