| Literature DB >> 28448581 |
Gebremedhin Gebremicael1, Yohanes Belay1, Fitsum Girma1, Yemane Abreha1, Atsbeha Gebreegziabxier1, Simret Tesfaye1, Zelalem Messele2, Yibeltal Assefa1, Bahrie Bellete2, Desta Kassa1, Lara Vojnov3.
Abstract
INTRODUCTION: In Ethiopia, CD4+ T-cell counting is still required for all patients at baseline before antiretroviral therapy (ART) and to determine eligibility and follow-up of opportunistic infection prophylaxis. However, access to CD4+ T cell count in rural health facilities remains a major challenge in Ethiopia like other resource-limited settings.Entities:
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Year: 2017 PMID: 28448581 PMCID: PMC5407647 DOI: 10.1371/journal.pone.0176323
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Characteristics of study participants.
| Male | Female | Total | |
|---|---|---|---|
| Number of subjects (%) | 100 (31) | 222 (69) | 322 (100) |
| Median age (interquartile range) | 42 (35.5–48) | 35 (29–42) | 37.0 (30–44) |
| Number of patients on ART (%) | 87 (86) | 198 (89) | 285 (88) |
| Median (interquartile range) CD4 cell/μl (BD FACSCalibur™) | 318 (168.5–469) | 444 (299–598) | 407.5 (258–555) |
| CD4 ≤100 cells/μl | 9 (9) | 3 (1.4) | 12 (3.7) |
| 100< CD4 ≤ 350 cells/μl | 45 (45) | 67 (30.2) | 112 (34.8) |
| 350< CD4 ≤ 500 cells/μl | 27 (27) | 66 (29.7) | 93 (28.9) |
| CD4 >500 cells/μl | 19 (19) | 86 (38.7) | 105 (32.6) |
FACSPresto™ comparing with BD FACSCalibur™ on the CD4+ T-cell testing.
| BD FACSPresto™ Capillary vs BD FACSCalibur™ (Venous) | BD FACSPresto™ Venous | BD FACSPresto™ Capillary vs BD FACSPresto Venous | |
|---|---|---|---|
| N | 320 | 317 | 315 |
| CD4 cell/μl, BD FACSPresto™ (median, interquartile range) | 431 (276–603.5) | 407 (262–553) | |
| CD4 cell/μl BD FACSCalibur™ (median, interquartile range) | 413.5 (260–556) | 420 (263–557) | |
| Coefficient of determination R2 | 0.87 | 0.90 | 0.90 |
| Absolute mean bias (cell/μl) (LOA) | 28.3 (-157.1,213.7) | -13.3 (-163.2, 136.6) | 41.7 (-94.1,177.5) |
| Relative bias (%) (LOA) | 6.4 (-35.7, 48.6) | -2.99 (-36.7, 30.7) | 9.5 (-21.9, 41.4) |
| Percentage of similarity, (% CV) | 105.2 (15.1%) | 99.3 (10.7%) | 106.2 (11.3%) |
Sensitivity, specificity, upward and downward misclassification, positive and negative predictive value of the BD FACSPresto™ using capillary blood compared with the BD FACSCalibur™ reference technology across three CD4+ T cells thresholds values.
| CD4+Tcell | Sensitivity | Specificity | Upward misclassification | Downward misclassification | Total Misclassification | Positive predictive value | Negative predictive value |
|---|---|---|---|---|---|---|---|
| 100 | 83.3% | 99.7% | 2/12 (16.7%) | 1/308 (0.3%) | 3/320 (0.9%) | 90.9% | 99.4% |
| 350 | 82.9% | 92.9% | 21/123 (17.1%) | 14/197 (7.1%) | 35/320 (10.7%) | 87.9% | 89.7% |
| 500 | 87.9% | 91.4% | 26/215(12.1%) | 9/105 (8.6%) | 35/320 (10.9%) | 95.5% | 78.7% |
BD FACSPresto™ comparing with BD FACSCalibur™ on the CD4% testing.
| BD FACSPresto™ Capillary vs BD FACSCalibur™ (Venous) | BD FACSPresto™ Venous | BD FACSPresto™ Capillary vs BD FACSPresto Venous | |
|---|---|---|---|
| N | 320 | 317 | 315 |
| CD4%, BD FACSPresto™ (median, interquartile range) | 21.0 (14.2–28.0) | 22.7 (15.7–28.7) | |
| CD4% BD FACSCalibur™ (median, interquartile range) | 22 (15–27) | 22 (15–27) | |
| Coefficient of determination R2 | 0.95 | 0.98 | 0.95 |
| Absolute mean bias (LOA) | -0.3 (-4.5, 3.9) | 0.8 (-1.8, 3.4) | -1.1 (-3.0,5.3) |
| Relative bias (%) (LOA) | -0.1 (-4.5, 3.9) | 0.2 (-1.8, 3.4) | -0.3 (-5.3, 3.0) |
| Percentage of similarity, (% CV) | 99.1 (6.4%) | 101 (4.2%) | 97.4 (5.5%) |
FACSPresto comparing with Sysmex XT-1800i™on the Hemoglobin concentration testing.
| BD FACSPresto™ Capillary vs Sysmex XT-1800i™ (Venous) | BD FACSPresto™ Venous | BD FACSPresto™ Capillary vs BD FACSPresto Venous | |
|---|---|---|---|
| N | 321 | 319 | 318 |
| Hgb dl/μl, BD FACSPresto™ (median, interquartile range) | 14.3 (13–15.3) | 13.9 (12.8–14.8) | |
| Hgb dl/μl Sysmex XT-1800i™ (median, interquartile range) | 14.4 (13.4–15.5) | 14.4 (13.4–15.5) | |
| Coefficient of determination R2 | 0.84 | 0.94 | 0.84 |
| Absolute mean bias (dl/μl) (LOA) | -0.2 (-1.7, 1.3) | -0.59 (-1.49, 0.31) | -0.4 (-1.8,1.0) |
| Relative bias (%) (LOA) | 0.0 (-1.7, 1.3) | -0.1 (-1.5, 0.3) | 0.1 (-1.0, 1.8) |
| Percentage of similarity, (% CV) | 99.4 (2.7%) | 98 (1.6%) | 101.5 (2.7%) |
Sensitivity, specificity, upward and downward misclassification, positive and negative predictive value of the BD FACSPresto™ using venous blood compared with the BD FACSCalibur™ reference technology across three CD4+ T cells thresholds values.
| CD4+Tcell | Sensitivity | Specificity | Upward misclassification | Downward misclassification n/N (%) | Total Misclassification n/N (%) | Positive predictive value (95%CI) | Negative predictive value (95%CI) |
|---|---|---|---|---|---|---|---|
| 100 | 100% | 99.4% | 0/7 (0.0%) | 2/310 (0.65%) | 2/317 (0.63%) | 77.8% | 100% |
| 350 | 91.6% | 91.9% | 10/119 (8.4%) | 16/198 (8.1%) | 26/317 (8.2%) | 87.2% | 94.8% |
| 500 | 94.3% | 83.8% | 12/212 (5.7%) | 17/105 (16.2%) | 29/317 (9.2%) | 92.2% | 88.0% |
Precision of the BD FACSPresto™ technology.
| Precision (Variability) | # of samples | Repeating test for each sample | Average %CV (range) for CD4+ T-cell count | Average %CV (range) for CD4% count | Average %CV (range) for Hgb concentration |
|---|---|---|---|---|---|
| Intra-Assay | 12 | 10 replicate | 6.2% (3.5–12.3) | 5.2% (2.6–11.2) | 2.2% (1.1–3.3) |
| Inter-Instrument | 8 | 10 replicate | 6.5% (3.7–13.2) | 5.7% (2.8–11.4) | 2.4% (1.3–3.9) |
| Instrument precision | 15 | 10 runs | 4.2% (1.2–10.7) | 3.5% (1.1–9.8) | 1.7% (0.9–4.9) |
Error rates of the BD FACSPresto™ technology.
| Characteristics | BD FACSPresto™ Capillary | BD FACSPresto™ Venous |
|---|---|---|
| Total tested (N) | 325 | 323 |
| No of valid Result obtained | 322 | 317 |
| No of invalid result obtained (n) | 3 | 6 |
| Failure rate %, (n/N) | 0.9 (3/325) | 1.9 (6/323) |