Literature DB >> 28446963

New Lncs to mesendoderm specification.

Michael Alexanian1, Thierry Pedrazzini1, Samir Ounzain1.   

Abstract

Mammalian genomes are pervasively transcribed generating thousands of long noncoding RNAs (lncRNAs) with emergent regulatory roles. Many of these lncRNAs exhibit highly specialised expression patterns during development and typically flank and regulate key developmental factors. In this review, we discuss and summarise the latest advances in our understanding of the roles of lncRNAs during mesendoderm (ME) specification, a key step during gastrulation and the formation of the primitive streak (PS).

Entities:  

Keywords:  Long noncoding RNAs (lncRNAs)

Year:  2017        PMID: 28446963      PMCID: PMC5383557          DOI: 10.21037/jtd.2017.03.70

Source DB:  PubMed          Journal:  J Thorac Dis        ISSN: 2072-1439            Impact factor:   2.895


  19 in total

1.  Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.

Authors:  Moran N Cabili; Cole Trapnell; Loyal Goff; Magdalena Koziol; Barbara Tazon-Vega; Aviv Regev; John L Rinn
Journal:  Genes Dev       Date:  2011-09-02       Impact factor: 11.361

Review 2.  Small and long non-coding RNAs in cardiac homeostasis and regeneration.

Authors:  Samir Ounzain; Stefania Crippa; Thierry Pedrazzini
Journal:  Biochim Biophys Acta       Date:  2012-08-23

3.  HoxBlinc RNA Recruits Set1/MLL Complexes to Activate Hox Gene Expression Patterns and Mesoderm Lineage Development.

Authors:  Changwang Deng; Ying Li; Lei Zhou; Joonseok Cho; Bhavita Patel; Naohiro Terada; Yangqiu Li; Jörg Bungert; Yi Qiu; Suming Huang
Journal:  Cell Rep       Date:  2015-12-24       Impact factor: 9.423

4.  Long noncoding RNA as modular scaffold of histone modification complexes.

Authors:  Miao-Chih Tsai; Ohad Manor; Yue Wan; Nima Mosammaparast; Jordon K Wang; Fei Lan; Yang Shi; Eran Segal; Howard Y Chang
Journal:  Science       Date:  2010-07-08       Impact factor: 47.728

5.  Identification of novel long noncoding RNAs underlying vertebrate cardiovascular development.

Authors:  Leo Kurian; Aitor Aguirre; Ignacio Sancho-Martinez; Christopher Benner; Tomoaki Hishida; Thai B Nguyen; Pradeep Reddy; Emmanuel Nivet; Marie N Krause; David A Nelles; Concepcion Rodriguez Esteban; Josep M Campistol; Gene W Yeo; Juan Carlos Izpisua Belmonte
Journal:  Circulation       Date:  2015-03-04       Impact factor: 29.690

6.  Human β cell transcriptome analysis uncovers lncRNAs that are tissue-specific, dynamically regulated, and abnormally expressed in type 2 diabetes.

Authors:  Ignasi Morán; Ildem Akerman; Martijn van de Bunt; Ruiyu Xie; Marion Benazra; Takao Nammo; Luis Arnes; Nikolina Nakić; Javier García-Hurtado; Santiago Rodríguez-Seguí; Lorenzo Pasquali; Claire Sauty-Colace; Anthony Beucher; Raphael Scharfmann; Joris van Arensbergen; Paul R Johnson; Andrew Berry; Clarence Lee; Timothy Harkins; Valery Gmyr; François Pattou; Julie Kerr-Conte; Lorenzo Piemonti; Thierry Berney; Neil Hanley; Anna L Gloyn; Lori Sussel; Linda Langman; Kenneth L Brayman; Maike Sander; Mark I McCarthy; Philippe Ravassard; Jorge Ferrer
Journal:  Cell Metab       Date:  2012-10-03       Impact factor: 27.287

7.  Braveheart, a long noncoding RNA required for cardiovascular lineage commitment.

Authors:  Carla A Klattenhoff; Johanna C Scheuermann; Lauren E Surface; Robert K Bradley; Paul A Fields; Matthew L Steinhauser; Huiming Ding; Vincent L Butty; Lillian Torrey; Simon Haas; Ryan Abo; Mohammadsharif Tabebordbar; Richard T Lee; Christopher B Burge; Laurie A Boyer
Journal:  Cell       Date:  2013-01-24       Impact factor: 41.582

8.  Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells.

Authors:  Sai Luo; J Yuyang Lu; Lichao Liu; Yafei Yin; Chunyan Chen; Xue Han; Bohou Wu; Ronggang Xu; Wei Liu; Pixi Yan; Wen Shao; Zhi Lu; Haitao Li; Jie Na; Fuchou Tang; Jianlong Wang; Yong E Zhang; Xiaohua Shen
Journal:  Cell Stem Cell       Date:  2016-03-17       Impact factor: 24.633

9.  The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse.

Authors:  Phillip Grote; Lars Wittler; David Hendrix; Frederic Koch; Sandra Währisch; Arica Beisaw; Karol Macura; Gaby Bläss; Manolis Kellis; Martin Werber; Bernhard G Herrmann
Journal:  Dev Cell       Date:  2013-01-28       Impact factor: 12.270

10.  The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Authors:  Thomas Derrien; Rory Johnson; Giovanni Bussotti; Andrea Tanzer; Sarah Djebali; Hagen Tilgner; Gregory Guernec; David Martin; Angelika Merkel; David G Knowles; Julien Lagarde; Lavanya Veeravalli; Xiaoan Ruan; Yijun Ruan; Timo Lassmann; Piero Carninci; James B Brown; Leonard Lipovich; Jose M Gonzalez; Mark Thomas; Carrie A Davis; Ramin Shiekhattar; Thomas R Gingeras; Tim J Hubbard; Cedric Notredame; Jennifer Harrow; Roderic Guigó
Journal:  Genome Res       Date:  2012-09       Impact factor: 9.043

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