Literature DB >> 28446796

The reinvention of twentieth century microscopy for three-dimensional imaging.

Lachlan W Whitehead1,2, Kate McArthur1,2, Niall D Geoghegan1,2, Kelly L Rogers1,2.   

Abstract

In just over a decade, the field of biomedical research has witnessed a radical evolution in technologies for the 3- and 4-dimensional imaging of biological samples. Light sheet fluorescence microscopy is quickly developing into a powerful approach for fast, volumetric imaging of cells, tissues and living organisms. This review touches on the development of 3-dimensional imaging, from its foundations, namely from the invention of confocal microscopy in the twentieth century to more recent examples, notably the IsoView SPIM, the Lattice Light Sheet Microscope and swept confocally aligned planar excitation. These technologies overcome the limitations of conventional optical sectioning techniques and enable unprecedented levels of spatio-temporal resolution with low levels of phototoxicity. Developing in parallel with powerful computational approaches, light sheet based methods promise to completely transform cell biology as we know it today.

Mesh:

Year:  2017        PMID: 28446796     DOI: 10.1038/icb.2017.36

Source DB:  PubMed          Journal:  Immunol Cell Biol        ISSN: 0818-9641            Impact factor:   5.126


  30 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

2.  Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.

Authors:  Raju Tomer; Khaled Khairy; Fernando Amat; Philipp J Keller
Journal:  Nat Methods       Date:  2012-06-03       Impact factor: 28.547

3.  Resolution enhancement in a light-sheet-based microscope (SPIM).

Authors:  Christoph J Engelbrecht; Ernst H Stelzer
Journal:  Opt Lett       Date:  2006-05-15       Impact factor: 3.776

4.  Quantitative imaging of cell dynamics in mouse embryos using light-sheet microscopy.

Authors:  Ryan S Udan; Victor G Piazza; Chih-Wei Hsu; Anna-Katerina Hadjantonakis; Mary E Dickinson
Journal:  Development       Date:  2014-10-24       Impact factor: 6.868

5.  Two-photon laser scanning fluorescence microscopy.

Authors:  W Denk; J H Strickler; W W Webb
Journal:  Science       Date:  1990-04-06       Impact factor: 47.728

6.  Green fluorescent protein as a marker for gene expression.

Authors:  M Chalfie; Y Tu; G Euskirchen; W W Ward; D C Prasher
Journal:  Science       Date:  1994-02-11       Impact factor: 47.728

7.  Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy.

Authors:  Yicong Wu; Peter Wawrzusin; Justin Senseney; Robert S Fischer; Ryan Christensen; Anthony Santella; Andrew G York; Peter W Winter; Clare M Waterman; Zhirong Bao; Daniel A Colón-Ramos; Matthew McAuliffe; Hari Shroff
Journal:  Nat Biotechnol       Date:  2013-10-13       Impact factor: 54.908

8.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

9.  OMERO: flexible, model-driven data management for experimental biology.

Authors:  Chris Allan; Jean-Marie Burel; Josh Moore; Colin Blackburn; Melissa Linkert; Scott Loynton; Donald Macdonald; William J Moore; Carlos Neves; Andrew Patterson; Michael Porter; Aleksandra Tarkowska; Brian Loranger; Jerome Avondo; Ingvar Lagerstedt; Luca Lianas; Simone Leo; Katherine Hands; Ron T Hay; Ardan Patwardhan; Christoph Best; Gerard J Kleywegt; Gianluigi Zanetti; Jason R Swedlow
Journal:  Nat Methods       Date:  2012-02-28       Impact factor: 28.547

10.  Actin depletion initiates events leading to granule secretion at the immunological synapse.

Authors:  Alex T Ritter; Yukako Asano; Jane C Stinchcombe; N M G Dieckmann; Bi-Chang Chen; C Gawden-Bone; Schuyler van Engelenburg; Wesley Legant; Liang Gao; Michael W Davidson; Eric Betzig; Jennifer Lippincott-Schwartz; Gillian M Griffiths
Journal:  Immunity       Date:  2015-05-19       Impact factor: 31.745

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  7 in total

1.  Advanced microscopy and imaging techniques in immunology and cell biology.

Authors:  Edwin D Hawkins
Journal:  Immunol Cell Biol       Date:  2017-07       Impact factor: 5.126

2.  Looking through Brains with Fast Passive CLARITY: Zebrafish, Rodents, Non-human Primates and Humans.

Authors:  Farzad Mortazavi; Alexander J Stankiewicz; Irina V Zhdanova
Journal:  Bio Protoc       Date:  2019-08-05

3.  Nuclear bodies formed by polyQ-ataxin-1 protein are liquid RNA/protein droplets with tunable dynamics.

Authors:  Sunyuan Zhang; Elizabeth Hinde; Molly Parkyn Schneider; David A Jans; Marie A Bogoyevitch
Journal:  Sci Rep       Date:  2020-01-31       Impact factor: 4.379

Review 4.  Advanced high resolution three-dimensional imaging to visualize the cerebral neurovascular network in stroke.

Authors:  Chudai Zeng; Zhuohui Chen; Haojun Yang; Yishu Fan; Lujing Fei; Xinghang Chen; Mengqi Zhang
Journal:  Int J Biol Sci       Date:  2022-01-01       Impact factor: 6.580

5.  A Whole Brain Staining, Embedding, and Clearing Pipeline for Adult Zebrafish to Visualize Cell Proliferation and Morphology in 3-Dimensions.

Authors:  Benjamin W Lindsey; Alon M Douek; Felix Loosli; Jan Kaslin
Journal:  Front Neurosci       Date:  2018-01-17       Impact factor: 4.677

6.  Light sheet fluorescence microscopy guided MALDI-imaging mass spectrometry of cleared tissue samples.

Authors:  Andreas Blutke; Na Sun; Zhihao Xu; Achim Buck; Luke Harrison; Sonja C Schriever; Paul T Pfluger; David Wiles; Thomas Kunzke; Katharina Huber; Jürgen Schlegel; Michaela Aichler; Annette Feuchtinger; Kaspar Matiasek; Stefanie M Hauck; Axel Walch
Journal:  Sci Rep       Date:  2020-09-02       Impact factor: 4.379

Review 7.  Cousins at work: How combining medical with optical imaging enhances in vivo cell tracking.

Authors:  Alessia Volpe; Ewelina Kurtys; Gilbert O Fruhwirth
Journal:  Int J Biochem Cell Biol       Date:  2018-06-28       Impact factor: 5.085

  7 in total

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