Literature DB >> 28444822

Triplex DNA Nanostructures: From Basic Properties to Applications.

Yuwei Hu1, Alessandro Cecconello1, Andrea Idili2, Francesco Ricci2, Itamar Willner1.   

Abstract

Triplex nucleic acids have recently attracted interest as part of the rich "toolbox" of structures used to develop DNA-based nanostructures and materials. This Review addresses the use of DNA triplexes to assemble sensing platforms and molecular switches. Furthermore, the pH-induced, switchable assembly and dissociation of triplex-DNA-bridged nanostructures are presented. Specifically, the aggregation/deaggregation of nanoparticles, the reversible oligomerization of origami tiles and DNA circles, and the use of triplex DNA structures as functional units for the assembly of pH-responsive systems and materials are described. Examples include semiconductor-loaded DNA-stabilized microcapsules, DNA-functionalized dye-loaded metal-organic frameworks (MOFs), and the pH-induced release of the loads. Furthermore, the design of stimuli-responsive DNA-based hydrogels undergoing reversible pH-induced hydrogel-to-solution transitions using triplex nucleic acids is introduced, and the use of triplex DNA to assemble shape-memory hydrogels is discussed. An outlook for possible future applications of triplex nucleic acids is also provided.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA triplexes; molecular switches; nanobiotechnology; sensors; stimuli-responsive materials

Mesh:

Substances:

Year:  2017        PMID: 28444822     DOI: 10.1002/anie.201701868

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  32 in total

1.  Consecutive feedback-driven constitutional dynamic networks.

Authors:  Liang Yue; Shan Wang; Verena Wulf; Sivan Lilienthal; Françoise Remacle; R D Levine; Itamar Willner
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-06       Impact factor: 11.205

2.  Controllable assembly of synthetic constructs with programmable ternary DNA interaction.

Authors:  Huangchen Cui; Tianqing Zhang; Yuhan Kong; Hang Xing; Bryan Wei
Journal:  Nucleic Acids Res       Date:  2022-06-17       Impact factor: 19.160

3.  Biocatalytic cascades and intercommunicated biocatalytic cascades in microcapsule systems.

Authors:  Pu Zhang; Amit Fischer; Yu Ouyang; Jianbang Wang; Yang Sung Sohn; Ola Karmi; Rachel Nechushtai; Itamar Willner
Journal:  Chem Sci       Date:  2022-04-29       Impact factor: 9.969

4.  Engineering a responsive DNA triple helix into an octahedral DNA nanostructure for a reversible opening/closing switching mechanism: a computational and experimental integrated study.

Authors:  Alessio Ottaviani; Federico Iacovelli; Andrea Idili; Mattia Falconi; Francesco Ricci; Alessandro Desideri
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

5.  Rational design of guiding elements to control folding topology in i-motifs with multiple quadruplexes.

Authors:  Alexander S Minasyan; Srinivas Chakravarthy; Suchitra Vardelly; Mark Joseph; Evgueni E Nesterov; Irina V Nesterova
Journal:  Nanoscale       Date:  2021-05-20       Impact factor: 7.790

Review 6.  Triplex-forming oligonucleotides: a third strand for DNA nanotechnology.

Authors:  Arun Richard Chandrasekaran; David A Rusling
Journal:  Nucleic Acids Res       Date:  2018-02-16       Impact factor: 16.971

7.  pH-responsive DNA nanomicelles for chemo-gene synergetic therapy of anaplastic large cell lymphoma.

Authors:  Yuwei Li; Shuzhen Yue; Jingyu Cao; Chengzhan Zhu; Yixiu Wang; Xin Hai; Weiling Song; Sai Bi
Journal:  Theranostics       Date:  2020-07-09       Impact factor: 11.556

8.  Programmed catalysis within stimuli-responsive mechanically unlocked nanocavities in DNA origami tiles.

Authors:  Jianbang Wang; Zhixin Zhou; Zhenzhen Li; Itamar Willner
Journal:  Chem Sci       Date:  2020-10-27       Impact factor: 9.825

9.  Thioflavin T binds dimeric parallel-stranded GA-containing non-G-quadruplex DNAs: a general approach to lighting up double-stranded scaffolds.

Authors:  Shuangna Liu; Pai Peng; Huihui Wang; Lili Shi; Tao Li
Journal:  Nucleic Acids Res       Date:  2017-12-01       Impact factor: 16.971

Review 10.  DNA Assembly-Based Stimuli-Responsive Systems.

Authors:  Shasha Lu; Jianlei Shen; Chunhai Fan; Qian Li; Xiurong Yang
Journal:  Adv Sci (Weinh)       Date:  2021-05-14       Impact factor: 16.806

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