Literature DB >> 28440341

Quantitative profiling of the UGT transcriptome in human drug-metabolizing tissues.

A Tourancheau1,2, M Rouleau1,2, S Guauque-Olarte, L Villeneuve1,2, I Gilbert1,2, A Droit3, C Guillemette1,2.   

Abstract

Alternative splicing as a mean to control gene expression and diversify function is suspected to considerably influence drug response and clearance. We report the quantitative expression profiles of the human UGT genes including alternatively spliced variants not previously annotated established by deep RNA-sequencing in tissues of pharmacological importance. We reveal a comprehensive quantification of the alternative UGT transcriptome that differ across tissues and among individuals. Alternative transcripts that comprise novel in-frame sequences associated or not with truncations of the 5'- and/or 3'- termini, significantly contribute to the total expression levels of each UGT1 and UGT2 gene averaging 21% in normal tissues, with expression of UGT2 variants surpassing those of UGT1. Quantitative data expose preferential tissue expression patterns and remodeling in favor of alternative variants upon tumorigenesis. These complex alternative splicing programs have the strong potential to contribute to interindividual variability in drug metabolism in addition to diversify the UGT proteome.

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Year:  2017        PMID: 28440341     DOI: 10.1038/tpj.2017.5

Source DB:  PubMed          Journal:  Pharmacogenomics J        ISSN: 1470-269X            Impact factor:   3.550


  31 in total

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Journal:  Cancer Treat Res       Date:  2013

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Journal:  Nat Methods       Date:  2012-03-04       Impact factor: 28.547

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4.  Immunohistochemical expression of conjugating UGT1A-derived isoforms in normal and tumoral drug-metabolizing tissues in humans.

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5.  Unravelling the transcriptomic landscape of the major phase II UDP-glucuronosyltransferase drug metabolizing pathway using targeted RNA sequencing.

Authors:  A Tourancheau; G Margaillan; M Rouleau; I Gilbert; L Villeneuve; E Lévesque; A Droit; C Guillemette
Journal:  Pharmacogenomics J       Date:  2015-04-14       Impact factor: 3.550

6.  Extensive splicing of transcripts encoding the bile acid-conjugating enzyme UGT2B4 modulates glucuronidation.

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7.  Dual roles for splice variants of the glucuronidation pathway as regulators of cellular metabolism.

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Journal:  Mol Pharmacol       Date:  2013-10-18       Impact factor: 4.436

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5.  De Novo Transcriptome Assembly and Annotation of Liver and Brain Tissues of Common Brushtail Possums (Trichosurus vulpecula) in New Zealand: Transcriptome Diversity after Decades of Population Control.

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Review 7.  Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS)-Based Proteomics of Drug-Metabolizing Enzymes and Transporters.

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Journal:  Molecules       Date:  2020-06-11       Impact factor: 4.411

Review 8.  Emerging roles for UDP-glucuronosyltransferases in drug resistance and cancer progression.

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Journal:  Br J Cancer       Date:  2020-02-12       Impact factor: 7.640

  8 in total

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