Literature DB >> 28435710

Inter-action between maleic acid and N-R-furfuryl-amines: crystal structure of 2-methyl-N-[(5-phenyl-furan-2-yl)meth-yl]propan-2-aminium (2Z)-3-carb-oxy-acrylate and N-[(5-iodo-furan-2-yl)meth-yl]-2-methyl-propan-2-aminium (2Z)-3-carb-oxy-prop-2-enoate.

Elisaveta A Kvyatkovskaya1, Vladimir P Zaytsev1, Fedor I Zubkov1, Pavel V Dorovatovskii2, Yan V Zubavichus2, Victor N Khrustalev3,4.   

Abstract

The title mol-ecular salts, C15H20NOC4H3O4-, (I), and C9H15INOC4H3O4-, (II), have very similar mol-ecular geometries for both cation and anion. The anions of both (I) and (II) are practically planar (r.m.s. deviations = 0.062 and 0.072 Å, respectively) and adopt a rare symmetrical geometry with the hy-droxy H atom approximately equidistant from the two O atoms. In their crystals, the cations and anions in both (I) and (II) form tight ionic pairs via strong N-H⋯O hydrogen bonds, with a roughly perpendicular disposition of the anion to the furan ring of the cation. This ion-pair conformation appears to correlate with the lack of reactivity of these salts in [4 + 2] cyclo-addition reactions. In the extended structures of (I) and (II), the ion pairs form hydrogen-bonded chains propagating along [010] and [001], respectively, via N-H⋯O hydrogen bonds.

Entities:  

Keywords:  Diels–Alder reaction; crystal structure; furans; maleates; synchrotron radiation

Year:  2017        PMID: 28435710      PMCID: PMC5382611          DOI: 10.1107/S2056989017003541

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Owing to the fact that the furan ring contains a system of conjugated double bonds, it usually acts as an effective diene in intra- and inter­molecular Diels–Alder reactions with electron-deficient dienophiles. The [4 + 2] cyclo­addition of furans with maleic acid leading to structurally diverse 7-oxabi­cyclo[2.2.1]heptenes has been investigated for a long time (Diels & Alder, 1931 ▸; Berson & Swidler, 1953 ▸, 1954 ▸; Eggelte et al., 1973 ▸; Sprague et al., 1985 ▸). However, there are only fragmentary data concerning the reactions of halogen- or aryl-substituted furans with maleic acid (Sheinkman et al., 1972 ▸; Shih et al., 1975 ▸). It is known that the inter­action between maleic acid and furfuryl­amines leads usually to the formation of the salts, but is not accompanied by the [4 + 2] cyclo­addition (Clitherow, 1983 ▸; Price et al., 1985 ▸; Brown, 1986 ▸; Pelosi et al., 2002 ▸; Craig et al., 2008 ▸; Metsger et al., 2010 ▸). The main goal of this work was to study the cyclo­addition reaction between 5-R-furfuryl-tert-butyl­amines and maleic acid. The inter­action between the corresponding amines and maleic acid at room temperature leads to the salts (I) and (II) only (Fig. 1 ▸). Unexpectedly, attempts to achieve thermal cyclization of salts (I) and (II) did not result in isolation of the targeted 7-oxabi­cyclo­[2.2.1]heptenes: the initial maleates remained unchanged at temperatures up to 413 K (Fig. 2 ▸). In order to explain this fact by an understanding of their stereochemical features, an X-ray diffraction study of compounds (I) and (II) was undertaken.
Figure 1

Synthesis of maleic salts (I) and (II) from N-[(5-R-furan-2-yl)meth­yl]-2-methyl­propan-2-amines.

Figure 2

The attempted thermal cyclization of salts (I) (R = Ph) and (II) (R = I).

Structural commentary

Compounds (I), C15H20NOC4H3O4 −, and (II), C9H15INOC4H3O4 −, represent secondary amine salts of maleic acid and have very similar mol­ecular geometries (Figs. 3 ▸ and 4 ▸) for both cation and anion. The saturated C2–C1–N1–C(t-Bu) backbone of the ammonium cation is twisted by 72.66 (7) and 63.2 (2)° relative to the furan ring in (I) and (II), respectively. The phenyl substituent of the cation in (I) is almost coplanar to the furan ring (r.m.s. deviation is 0.006 Å). The anions of (I) and (II) are practically planar (r.m.s. deviations are 0.062 and 0.072 Å, respectively). It inter­esting to note that the hydrogen atom of the hy­droxy group of the anion is arranged at almost equal distances from the two oxygen atoms in both (I) and (II) (Tables 1 ▸ and 2 ▸, Figs. 3 ▸ and 4 ▸). Thus, the anions of (I) and (II) adopt a rare symmetrical geometry.
Figure 3

The mol­ecular structure of salt (I). Displacement ellipsoids are shown at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. Dashed lines indicate the intra­molecular O—H⋯O and inter­molecular N—H⋯O hydrogen bonds.

Figure 4

The mol­ecular structure of salt (II). Displacement ellipsoids are shown at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. Dashed lines indicate the intra­molecular O—H⋯O and inter­molecular N—H⋯O hydrogen bonds.

Table 1

Hydrogen-bond geometry (Å, °) for (I)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H5O⋯O31.160 (17)1.257 (17)2.4142 (14)175.3 (15)
N1—H1A⋯O2i 0.968 (15)1.790 (15)2.7547 (15)174.9 (13)
N1—H1B⋯O4ii 0.936 (15)1.860 (15)2.7803 (14)167.4 (13)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °) for (II)

D—H⋯A D—HH⋯A DA D—H⋯A
O5—H5O⋯O31.18 (5)1.25 (5)2.425 (3)172 (4)
N1—H1A⋯O20.88 (4)1.97 (4)2.828 (3)167 (3)
N1—H1B⋯O4i 0.88 (4)1.92 (4)2.792 (4)172 (3)

Symmetry code: (i) .

Importantly, the cations and anions in both (I) and (II) form tight ion pairs via strong N1—H1A⋯O2 hydrogen bonds (Tables 1 ▸ and 2 ▸, Figs. 3 ▸ and 4 ▸). Within the tight ion pairs, the anion is roughly perpendicular to the furan ring of the cation, the inter­planar angles being 72.01 (4) and 67.94 (12)° in (I) and (II), respectively. Apparently, the formation of the robust tight ion pairs with a definite cation–anion conformation inhibits the desired cyclization reaction, preventing the closure of the cations and anions.

Supra­molecular features

Despite the sterically different substituents at the furyl ring of the aminium cations, compounds (I) and (II) organize similar supra­molecular structures in the solid state. So, in the crystal of (I), the tight ion pairs form hydrogen-bonded chains propagating along [010] via strong N1—H1B⋯O4 links (Table 1 ▸, Fig. 5 ▸). In the crystal of (II), the analogous hydrogen-bonded chains propagate along [001] (Table 2 ▸, Fig. 6 ▸). In both (I) and (II), the chains are further packed in stacks along [100] (Figs. 5 ▸ and 6 ▸).
Figure 5

The crystal structure of (I), illustrating the hydrogen-bonded chains propagating along [010]. Dashed lines indicate the intra­molecular O—H⋯O and inter­molecular N—H⋯O hydrogen bonds.

Figure 6

The crystal structure of (II), illustrating the hydrogen-bonded chains propagating along [001]. Dashed lines indicate the intra­molecular O—H⋯O and inter­molecular N—H⋯O hydrogen bonds.

Synthesis and crystallization

The starting N-[(5-R-furan-2-yl)meth­yl]-2-methyl­propan-2-amines were synthesized according to the procedure described recently (Zubkov et al., 2016 ▸). General procedure. A solution of the corresponding amine (1 mmol) and maleic acid (0.12 g, 1.1 mmol) in acetone (5 ml) was stirred for 1 h. The precipitated crystals were filtered off and recrystallized from an i-PrOH–DMF mixture [for (I)] or MeOH [for (II)] to give the analytically pure maleates (I) and (II). 2-Methyl- -[(5-phenyl­furan-2-yl)meth­yl]propan-2-amin­ium (2 )-3-carb­oxy­acrylate (I). Colourless prisms. Yield 0.26 g (72%). M.p. = 485.1–486.1 K (i-PrOH–DMF). IR (KBr), ν (cm−1): 1591, 1630, 3435. 1H NMR (DMSO, 600 MHz, 301 K): δ = 1.36 (s, 9H, t-Bu), 4.30 (s, 2H, CH2—N), 6.04 (s, 2H, –CH=CH–), 6.74 (d, 1H, H3, furyl, J = 3.4), 7.00 (d, 1H, H4, furyl, J = 3.4), 7.34 (br t, 1H, H4, Ph, J = 7.6), 7.46 (ddd, 2H, H3 and H5, Ph, J = 8.2, J = 7.6, J = 1.4), 7.76 (dd, 2H, H2 and H6, Ph, J = 8.2, J = 1.4), 8.89 (br s, 1H, CO2H). 13C NMR (CDCl3, 150.9 MHz, 301 K): δ = 25.7 (3C, CH3), 38.0 (CH2—N), 57.3 (N—C), 100.0 (2C, –CH=CH–), 107.4 (C4, fur­yl), 114.3 (C3, fur­yl), 124.2, 128.5, 129.5, 130.3, 136.7 (C1, Ph), 146.6 (C2, fur­yl), 154.5 (C5, fur­yl), 167.8 (2C, CO2). MS (APCI): m/z = 230 [M − 115]+. -[(5-Iodo­furan-2-yl)meth­yl]-2-methyl­propan-2-aminium (2 )-3-carb­oxy­prop-2-enoate (II). Colourless needles. Yield 0.31 g (79%). M.p. = 452.1–453.3 K (CH3OH). IR (KBr), ν (cm−1): 1576, 1631, 2800, 3012. 1H NMR (DMSO, 600 MHz, 301 K): δ = 1.26 (s, 9H, t-Bu), 4.19 (s, 2H, CH2—N), 5.99–6.00 (m, 2H, –CH=CH–), 6.54 (d, 1H, H3, furyl, J = 3.3), 6.73 (d, 1H, H4, furyl, J = 3.3), 8.89 (br s, 1H, CO2H). 13C NMR (CDCl3, 150.9 MHz, 301 K): δ = 25.6 (3C, CH3), 37.4 (CH2—N), 57.3 (N—C), 100.0 (C5, fur­yl), 115.3 (C4, fur­yl), 121.8 (C3, fur­yl), 136.6 (2C, —CH=CH—), 151.1 [C2, fur­yl], 167.7 (2C, CO2). MS (APCI): m/z = 280 [M − 115]+.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. X-ray diffraction studies for (II) were carried out on the ‘Belok’ beamline of the National Research Center "Kurchatov Institute" (Moscow, Russian Federation).
Table 3

Experimental details

 (I)(II)
Crystal data
Chemical formulaC15H20NO+·C4H3O4 C9H15INO+·C4H3O4
M r 345.38395.18
Crystal system, space groupTriclinic, P Monoclinic, P21/n
Temperature (K)120100
a, b, c (Å)7.5177 (4), 9.8339 (6), 12.1951 (7)5.7501 (12), 28.272 (6), 9.6402 (19)
α, β, γ (°)94.387 (1), 94.552 (1), 91.578 (1)90, 93.17 (3), 90
V3)895.57 (9)1564.8 (6)
Z 24
Radiation typeMo KαSynchrotron, λ = 0.96990 Å
μ (mm−1)0.094.69
Crystal size (mm)0.30 × 0.25 × 0.200.30 × 0.05 × 0.03
 
Data collection
DiffractometerBruker APEXII CCDRayonix SX165 CCD
Absorption correctionMulti-scan (SADABS; Sheldrick, 2003)Multi-scan (SCALA; Evans, 2006)
T min, T max 0.966, 0.9770.460, 0.860
No. of measured, independent and observed [I > 2σ(I)] reflections14165, 6555, 394721875, 3146, 2714
R int 0.0470.068
(sin θ/λ)max−1)0.7600.641
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.053, 0.122, 1.000.040, 0.100, 1.02
No. of reflections65553146
No. of parameters238194
H-atom treatmentH atoms treated by a mixture of independent and constrained refinementH atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3)0.31, −0.260.94, −1.21

Computer programs: APEX2 (Bruker, 2005 ▸), SAINT (Bruker, 2001 ▸), Automar (MarXperts, 2015 ▸), iMosflm (Battye et al., 2011 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸) and SHELXTL (Sheldrick, 2008 ▸).

The hydrogen atoms of the amino and hy­droxy groups were localized in a difference-Fourier map and refined isotropically with fixed displacement parameters [U iso(H) = 1.2U eq(N) and 1.5U eq(O)]. All other hydrogen atoms were placed in calculated positions with C—H = 0.95–0.99 Å and refined using the riding model with fixed isotropic displacement parameters [U iso(H) = 1.5U eq(C) for the CH3 groups and 1.2U eq(C) for all other atoms]. Crystal structure: contains datablock(s) global, I, II. DOI: 10.1107/S2056989017003541/hb7663sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989017003541/hb7663Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989017003541/hb7663IIsup3.hkl CCDC references: 1536143, 1023931 Additional supporting information: crystallographic information; 3D view; checkCIF report
C15H20NO+·C4H3O4Z = 2
Mr = 345.38F(000) = 368
Triclinic, P1Dx = 1.281 Mg m3
a = 7.5177 (4) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.8339 (6) ÅCell parameters from 2186 reflections
c = 12.1951 (7) Åθ = 2.6–31.5°
α = 94.387 (1)°µ = 0.09 mm1
β = 94.552 (1)°T = 120 K
γ = 91.578 (1)°Prism, colourless
V = 895.57 (9) Å30.30 × 0.25 × 0.20 mm
Bruker APEXII CCD diffractometer3947 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.047
φ and ω scansθmax = 32.7°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −11→11
Tmin = 0.966, Tmax = 0.977k = −14→14
14165 measured reflectionsl = −18→18
6555 independent reflections
Refinement on F2Primary atom site location: difference Fourier map
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: mixed
wR(F2) = 0.122H atoms treated by a mixture of independent and constrained refinement
S = 1.00w = 1/[σ2(Fo2) + (0.0454P)2] where P = (Fo2 + 2Fc2)/3
6555 reflections(Δ/σ)max < 0.001
238 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
O10.92461 (12)0.90909 (9)0.24482 (7)0.0223 (2)
N11.20595 (14)0.76402 (11)0.11610 (9)0.0175 (2)
H1A1.2498 (18)0.6949 (15)0.1627 (12)0.021*
H1B1.2370 (19)0.8484 (15)0.1545 (12)0.021*
C11.00641 (17)0.74679 (14)0.09978 (11)0.0223 (3)
H1C0.95960.81020.04610.027*
H1D0.97360.65250.06910.027*
C20.92419 (17)0.77432 (13)0.20536 (11)0.0216 (3)
C30.84120 (18)0.69612 (15)0.27361 (12)0.0264 (3)
H30.82330.59980.26520.032*
C40.78576 (19)0.78600 (15)0.36059 (12)0.0272 (3)
H40.72290.76100.42100.033*
C50.83939 (17)0.91370 (14)0.34107 (11)0.0222 (3)
C60.82740 (17)1.04880 (14)0.39825 (11)0.0229 (3)
C70.89734 (18)1.16539 (15)0.35647 (12)0.0262 (3)
H70.95501.15720.28980.031*
C80.88348 (19)1.29304 (16)0.41130 (12)0.0296 (3)
H80.93251.37160.38240.036*
C90.79823 (19)1.30640 (16)0.50820 (12)0.0302 (3)
H90.78811.39400.54540.036*
C100.72778 (19)1.19148 (16)0.55059 (11)0.0286 (3)
H100.66891.20050.61670.034*
C110.74308 (18)1.06376 (16)0.49678 (11)0.0260 (3)
H110.69600.98540.52690.031*
C121.30888 (17)0.75667 (13)0.01359 (11)0.0200 (3)
C131.50545 (18)0.75962 (15)0.05686 (12)0.0265 (3)
H13A1.53260.84180.10670.040*
H13B1.58040.7604−0.00530.040*
H13C1.52940.67850.09690.040*
C141.25942 (19)0.62298 (14)−0.05538 (12)0.0262 (3)
H14A1.13460.6240−0.08530.039*
H14B1.27510.5465−0.00890.039*
H14C1.33680.6126−0.11630.039*
C151.26620 (19)0.88007 (15)−0.05105 (12)0.0262 (3)
H15A1.29180.9639−0.00290.039*
H15B1.13970.8753−0.07790.039*
H15C1.33970.8804−0.11390.039*
O20.34880 (14)0.57638 (10)0.25174 (8)0.0310 (2)
O30.19310 (13)0.40290 (11)0.15970 (8)0.0306 (2)
O40.34720 (13)−0.00091 (10)0.23666 (8)0.0279 (2)
O50.19913 (12)0.15695 (10)0.14960 (8)0.0255 (2)
H5O0.190 (2)0.2747 (18)0.1531 (13)0.038*
C160.31067 (18)0.45314 (14)0.23545 (11)0.0226 (3)
C170.40964 (18)0.36056 (14)0.30859 (11)0.0235 (3)
H170.48300.40610.36800.028*
C180.41217 (18)0.22465 (14)0.30440 (11)0.0226 (3)
H180.48880.18920.36020.027*
C190.31356 (17)0.11924 (14)0.22580 (11)0.0210 (3)
U11U22U33U12U13U23
O10.0221 (5)0.0253 (5)0.0199 (5)0.0034 (4)0.0041 (4)0.0016 (4)
N10.0174 (5)0.0160 (5)0.0189 (5)0.0008 (4)−0.0002 (4)0.0010 (4)
C10.0167 (6)0.0276 (7)0.0217 (6)0.0006 (5)−0.0003 (5)−0.0016 (5)
C20.0178 (6)0.0236 (7)0.0225 (6)0.0032 (5)−0.0012 (5)−0.0011 (5)
C30.0246 (7)0.0266 (7)0.0281 (7)0.0009 (6)0.0022 (6)0.0025 (6)
C40.0254 (7)0.0333 (8)0.0242 (7)0.0024 (6)0.0068 (6)0.0056 (6)
C50.0181 (6)0.0320 (7)0.0172 (6)0.0057 (5)0.0023 (5)0.0039 (5)
C60.0183 (6)0.0309 (7)0.0197 (6)0.0072 (5)−0.0001 (5)0.0022 (5)
C70.0242 (7)0.0325 (8)0.0223 (7)0.0043 (6)0.0039 (5)0.0022 (6)
C80.0276 (7)0.0318 (8)0.0293 (8)0.0040 (6)0.0008 (6)0.0020 (6)
C90.0289 (7)0.0348 (8)0.0252 (7)0.0090 (6)−0.0028 (6)−0.0064 (6)
C100.0252 (7)0.0417 (9)0.0189 (7)0.0105 (6)0.0005 (5)−0.0004 (6)
C110.0227 (7)0.0359 (8)0.0197 (7)0.0077 (6)0.0006 (5)0.0038 (6)
C120.0189 (6)0.0220 (6)0.0193 (6)0.0012 (5)0.0031 (5)0.0007 (5)
C130.0207 (6)0.0299 (8)0.0291 (7)0.0013 (6)0.0037 (6)0.0026 (6)
C140.0260 (7)0.0261 (7)0.0257 (7)0.0021 (6)0.0042 (6)−0.0051 (6)
C150.0287 (7)0.0276 (7)0.0229 (7)0.0005 (6)0.0025 (6)0.0062 (5)
O20.0433 (6)0.0204 (5)0.0294 (6)0.0081 (4)0.0000 (5)0.0026 (4)
O30.0296 (5)0.0296 (6)0.0318 (6)0.0042 (4)−0.0079 (4)0.0075 (4)
O40.0333 (6)0.0196 (5)0.0301 (5)−0.0014 (4)−0.0006 (4)−0.0001 (4)
O50.0256 (5)0.0284 (5)0.0215 (5)−0.0018 (4)−0.0041 (4)0.0021 (4)
C160.0233 (6)0.0250 (7)0.0203 (6)0.0077 (5)0.0039 (5)0.0025 (5)
C170.0254 (7)0.0222 (7)0.0217 (7)0.0024 (5)−0.0045 (5)−0.0003 (5)
C180.0225 (6)0.0226 (7)0.0218 (6)0.0029 (5)−0.0042 (5)0.0021 (5)
C190.0206 (6)0.0230 (7)0.0191 (6)−0.0007 (5)0.0031 (5)0.0000 (5)
O1—C21.3747 (16)C11—H110.9500
O1—C51.3796 (15)C12—C151.5247 (19)
N1—C11.5007 (16)C12—C141.5259 (18)
N1—C121.5198 (16)C12—C131.5279 (18)
N1—H1A0.968 (15)C13—H13A0.9800
N1—H1B0.936 (15)C13—H13B0.9800
C1—C21.4817 (18)C13—H13C0.9800
C1—H1C0.9900C14—H14A0.9800
C1—H1D0.9900C14—H14B0.9800
C2—C31.352 (2)C14—H14C0.9800
C3—C41.424 (2)C15—H15A0.9800
C3—H30.9500C15—H15B0.9800
C4—C51.353 (2)C15—H15C0.9800
C4—H40.9500O2—C161.2351 (17)
C5—C61.4609 (19)O3—C161.2866 (17)
C6—C71.396 (2)O3—H5O1.257 (17)
C6—C111.4022 (19)O4—C191.2300 (16)
C7—C81.387 (2)O5—C191.2979 (16)
C7—H70.9500O5—H5O1.160 (17)
C8—C91.388 (2)C16—C171.4947 (19)
C8—H80.9500C17—C181.3343 (18)
C9—C101.387 (2)C17—H170.9500
C9—H90.9500C18—C191.4952 (18)
C10—C111.384 (2)C18—H180.9500
C10—H100.9500
C2—O1—C5106.85 (10)C10—C11—H11119.7
C1—N1—C12117.49 (10)C6—C11—H11119.7
C1—N1—H1A108.0 (8)N1—C12—C15108.92 (10)
C12—N1—H1A108.0 (8)N1—C12—C14109.41 (11)
C1—N1—H1B109.6 (9)C15—C12—C14111.64 (11)
C12—N1—H1B106.5 (9)N1—C12—C13105.08 (10)
H1A—N1—H1B106.6 (12)C15—C12—C13111.28 (11)
C2—C1—N1111.02 (10)C14—C12—C13110.29 (11)
C2—C1—H1C109.4C12—C13—H13A109.5
N1—C1—H1C109.4C12—C13—H13B109.5
C2—C1—H1D109.4H13A—C13—H13B109.5
N1—C1—H1D109.4C12—C13—H13C109.5
H1C—C1—H1D108.0H13A—C13—H13C109.5
C3—C2—O1109.83 (12)H13B—C13—H13C109.5
C3—C2—C1134.49 (13)C12—C14—H14A109.5
O1—C2—C1115.65 (12)C12—C14—H14B109.5
C2—C3—C4106.78 (13)H14A—C14—H14B109.5
C2—C3—H3126.6C12—C14—H14C109.5
C4—C3—H3126.6H14A—C14—H14C109.5
C5—C4—C3107.10 (12)H14B—C14—H14C109.5
C5—C4—H4126.4C12—C15—H15A109.5
C3—C4—H4126.4C12—C15—H15B109.5
C4—C5—O1109.43 (12)H15A—C15—H15B109.5
C4—C5—C6134.61 (13)C12—C15—H15C109.5
O1—C5—C6115.96 (12)H15A—C15—H15C109.5
C7—C6—C11118.51 (13)H15B—C15—H15C109.5
C7—C6—C5121.38 (12)C16—O3—H5O111.3 (7)
C11—C6—C5120.11 (13)C19—O5—H5O111.7 (8)
C8—C7—C6120.65 (13)O2—C16—O3123.38 (13)
C8—C7—H7119.7O2—C16—C17116.77 (12)
C6—C7—H7119.7O3—C16—C17119.85 (12)
C7—C8—C9120.20 (15)C18—C17—C16130.78 (13)
C7—C8—H8119.9C18—C17—H17114.6
C9—C8—H8119.9C16—C17—H17114.6
C10—C9—C8119.80 (14)C17—C18—C19130.28 (12)
C10—C9—H9120.1C17—C18—H18114.9
C8—C9—H9120.1C19—C18—H18114.9
C11—C10—C9120.17 (13)O4—C19—O5123.00 (12)
C11—C10—H10119.9O4—C19—C18117.33 (12)
C9—C10—H10119.9O5—C19—C18119.67 (12)
C10—C11—C6120.67 (14)
C12—N1—C1—C2−172.59 (11)C11—C6—C7—C80.0 (2)
C5—O1—C2—C30.25 (14)C5—C6—C7—C8179.45 (13)
C5—O1—C2—C1178.57 (11)C6—C7—C8—C9−0.6 (2)
N1—C1—C2—C3−109.20 (17)C7—C8—C9—C100.4 (2)
N1—C1—C2—O173.02 (14)C8—C9—C10—C110.3 (2)
O1—C2—C3—C40.17 (15)C9—C10—C11—C6−0.9 (2)
C1—C2—C3—C4−177.70 (14)C7—C6—C11—C100.8 (2)
C2—C3—C4—C5−0.53 (16)C5—C6—C11—C10−178.73 (12)
C3—C4—C5—O10.70 (16)C1—N1—C12—C1567.55 (14)
C3—C4—C5—C6−178.87 (14)C1—N1—C12—C14−54.73 (14)
C2—O1—C5—C4−0.60 (14)C1—N1—C12—C13−173.13 (11)
C2—O1—C5—C6179.06 (11)O2—C16—C17—C18−172.20 (14)
C4—C5—C6—C7−179.94 (15)O3—C16—C17—C187.4 (2)
O1—C5—C6—C70.51 (18)C16—C17—C18—C19−1.3 (3)
C4—C5—C6—C11−0.5 (2)C17—C18—C19—O4176.22 (14)
O1—C5—C6—C11179.98 (11)C17—C18—C19—O5−3.2 (2)
D—H···AD—HH···AD···AD—H···A
O5—H5O···O31.160 (17)1.257 (17)2.4142 (14)175.3 (15)
N1—H1A···O2i0.968 (15)1.790 (15)2.7547 (15)174.9 (13)
N1—H1B···O4ii0.936 (15)1.860 (15)2.7803 (14)167.4 (13)
C9H15INO+·C4H3O4F(000) = 784
Mr = 395.18Dx = 1.678 Mg m3
Monoclinic, P21/nSynchrotron radiation, λ = 0.96990 Å
a = 5.7501 (12) ÅCell parameters from 600 reflections
b = 28.272 (6) Åθ = 3.5–35.0°
c = 9.6402 (19) ŵ = 4.69 mm1
β = 93.17 (3)°T = 100 K
V = 1564.8 (6) Å3Needle, colourless
Z = 40.30 × 0.05 × 0.03 mm
Rayonix SX165 CCD diffractometer2714 reflections with I > 2σ(I)
φ scanRint = 0.068
Absorption correction: multi-scan (Scala; Evans, 2006)θmax = 38.5°, θmin = 3.5°
Tmin = 0.460, Tmax = 0.860h = −7→7
21875 measured reflectionsk = −36→36
3146 independent reflectionsl = −11→11
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.100w = 1/[σ2(Fo2) + (0.0377P)2 + 3.P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3146 reflectionsΔρmax = 0.94 e Å3
194 parametersΔρmin = −1.21 e Å3
0 restraintsExtinction correction: SHELXL2014 (Sheldrick, 2015a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: difference Fourier mapExtinction coefficient: 0.0047 (5)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
I10.75296 (5)0.48487 (2)0.86223 (3)0.05279 (17)
O10.4289 (4)0.56119 (7)0.7766 (3)0.0273 (5)
O20.6669 (4)0.62755 (8)0.4628 (2)0.0250 (5)
O30.4201 (4)0.64214 (9)0.2824 (3)0.0284 (5)
O40.7068 (4)0.65296 (8)−0.1219 (2)0.0242 (5)
O50.4335 (4)0.65188 (8)0.0330 (3)0.0272 (5)
H5O0.434 (7)0.6447 (14)0.153 (5)0.041*
N10.3606 (4)0.65833 (8)0.6639 (3)0.0172 (5)
H1A0.436 (6)0.6486 (12)0.592 (4)0.021*
H1B0.462 (7)0.6587 (12)0.735 (4)0.021*
C10.1674 (5)0.62389 (10)0.6907 (4)0.0227 (7)
H1C0.11090.62930.78450.027*
H1D0.03550.62890.62190.027*
C20.2549 (5)0.57433 (10)0.6802 (4)0.0247 (7)
C30.2006 (7)0.53816 (12)0.5920 (5)0.0379 (9)
H30.08760.53850.51630.045*
C40.3478 (8)0.49932 (12)0.6355 (5)0.0425 (10)
H40.35110.46870.59500.051*
C50.4796 (6)0.51500 (11)0.7450 (4)0.0307 (9)
C60.2890 (5)0.71010 (10)0.6427 (3)0.0189 (7)
C70.5174 (5)0.73740 (10)0.6298 (4)0.0236 (7)
H7A0.61510.73390.71570.035*
H7B0.48290.77100.61370.035*
H7C0.60010.72480.55160.035*
C80.1369 (5)0.71450 (11)0.5089 (4)0.0241 (7)
H8A0.22190.70250.43100.036*
H8B0.09680.74780.49260.036*
H8C−0.00610.69610.51710.036*
C90.1632 (5)0.72673 (10)0.7693 (4)0.0225 (7)
H9A0.01640.70940.77440.034*
H9B0.13080.76070.76110.034*
H9C0.26180.72080.85370.034*
C100.6235 (5)0.63160 (9)0.3358 (4)0.0198 (7)
C110.8219 (5)0.62384 (10)0.2425 (3)0.0213 (7)
H110.96250.61310.28840.026*
C120.8311 (5)0.62967 (10)0.1049 (4)0.0225 (7)
H120.97760.62250.06900.027*
C130.6458 (5)0.64577 (10)−0.0025 (3)0.0196 (6)
U11U22U33U12U13U23
I10.0535 (2)0.04314 (19)0.0625 (3)0.02765 (12)0.00979 (16)0.01596 (12)
O10.0296 (12)0.0202 (10)0.0322 (15)0.0075 (9)0.0039 (11)0.0029 (9)
O20.0267 (12)0.0268 (11)0.0221 (14)0.0022 (9)0.0057 (10)0.0000 (9)
O30.0182 (11)0.0421 (13)0.0254 (14)0.0036 (9)0.0057 (10)0.0003 (10)
O40.0217 (11)0.0293 (11)0.0218 (13)−0.0005 (8)0.0017 (10)0.0046 (9)
O50.0164 (10)0.0397 (13)0.0257 (14)0.0047 (9)0.0030 (9)0.0035 (10)
N10.0150 (12)0.0167 (11)0.0201 (15)0.0015 (9)0.0032 (11)0.0001 (10)
C10.0178 (14)0.0199 (14)0.031 (2)−0.0007 (11)0.0050 (13)0.0017 (13)
C20.0235 (15)0.0194 (14)0.032 (2)−0.0016 (11)0.0062 (14)0.0039 (13)
C30.042 (2)0.0239 (16)0.046 (3)−0.0080 (14)−0.0075 (18)0.0007 (16)
C40.054 (2)0.0180 (15)0.056 (3)−0.0022 (16)0.011 (2)−0.0060 (17)
C50.0343 (18)0.0207 (15)0.038 (2)0.0063 (12)0.0127 (17)0.0074 (14)
C60.0180 (14)0.0159 (13)0.0231 (19)0.0027 (10)0.0033 (13)−0.0002 (11)
C70.0210 (15)0.0182 (13)0.032 (2)0.0006 (11)0.0046 (14)0.0021 (13)
C80.0237 (15)0.0224 (14)0.0260 (19)0.0045 (11)−0.0001 (14)0.0007 (13)
C90.0198 (14)0.0214 (13)0.0267 (19)0.0024 (11)0.0046 (13)−0.0040 (13)
C100.0189 (14)0.0144 (12)0.026 (2)−0.0001 (10)0.0054 (13)0.0007 (12)
C110.0180 (14)0.0229 (14)0.0232 (19)0.0023 (11)0.0034 (13)0.0016 (13)
C120.0164 (14)0.0230 (14)0.029 (2)0.0026 (11)0.0065 (13)0.0003 (13)
C130.0172 (13)0.0181 (13)0.0235 (19)−0.0005 (10)0.0014 (13)0.0007 (12)
I1—C52.068 (4)C4—C51.341 (6)
O1—C51.376 (4)C4—H40.9500
O1—C21.379 (4)C6—C81.523 (5)
O2—C101.241 (4)C6—C91.527 (4)
O3—C101.287 (4)C6—C71.535 (4)
O3—H5O1.25 (5)C7—H7A0.9800
O4—C131.238 (4)C7—H7B0.9800
O5—C131.297 (3)C7—H7C0.9800
O5—H5O1.18 (5)C8—H8A0.9800
N1—C11.510 (4)C8—H8B0.9800
N1—C61.531 (4)C8—H8C0.9800
N1—H1A0.88 (4)C9—H9A0.9800
N1—H1B0.88 (4)C9—H9B0.9800
C1—C21.494 (4)C9—H9C0.9800
C1—H1C0.9900C10—C111.507 (4)
C1—H1D0.9900C11—C121.340 (5)
C2—C31.355 (5)C11—H110.9500
C3—C41.435 (6)C12—C131.515 (5)
C3—H30.9500C12—H120.9500
C5—O1—C2105.2 (3)N1—C6—C7105.5 (2)
C10—O3—H5O107.7 (19)C6—C7—H7A109.5
C13—O5—H5O107 (2)C6—C7—H7B109.5
C1—N1—C6116.4 (2)H7A—C7—H7B109.5
C1—N1—H1A109 (2)C6—C7—H7C109.5
C6—N1—H1A109 (2)H7A—C7—H7C109.5
C1—N1—H1B110 (2)H7B—C7—H7C109.5
C6—N1—H1B105 (2)C6—C8—H8A109.5
H1A—N1—H1B107 (3)C6—C8—H8B109.5
C2—C1—N1109.8 (2)H8A—C8—H8B109.5
C2—C1—H1C109.7C6—C8—H8C109.5
N1—C1—H1C109.7H8A—C8—H8C109.5
C2—C1—H1D109.7H8B—C8—H8C109.5
N1—C1—H1D109.7C6—C9—H9A109.5
H1C—C1—H1D108.2C6—C9—H9B109.5
C3—C2—O1110.7 (3)H9A—C9—H9B109.5
C3—C2—C1133.1 (3)C6—C9—H9C109.5
O1—C2—C1116.2 (3)H9A—C9—H9C109.5
C2—C3—C4106.4 (4)H9B—C9—H9C109.5
C2—C3—H3126.8O2—C10—O3123.0 (3)
C4—C3—H3126.8O2—C10—C11117.3 (3)
C5—C4—C3106.0 (3)O3—C10—C11119.7 (3)
C5—C4—H4127.0C12—C11—C10130.2 (3)
C3—C4—H4127.0C12—C11—H11114.9
C4—C5—O1111.8 (3)C10—C11—H11114.9
C4—C5—I1132.4 (3)C11—C12—C13130.5 (3)
O1—C5—I1115.7 (3)C11—C12—H12114.8
C8—C6—C9112.1 (3)C13—C12—H12114.8
C8—C6—N1109.2 (2)O4—C13—O5122.9 (3)
C9—C6—N1108.9 (2)O4—C13—C12117.4 (3)
C8—C6—C7110.1 (3)O5—C13—C12119.7 (3)
C9—C6—C7110.8 (3)
C6—N1—C1—C2168.5 (3)C2—O1—C5—C40.1 (4)
C5—O1—C2—C3−0.4 (4)C2—O1—C5—I1175.9 (2)
C5—O1—C2—C1−179.6 (3)C1—N1—C6—C8−66.1 (3)
N1—C1—C2—C3−115.3 (4)C1—N1—C6—C956.6 (4)
N1—C1—C2—O163.7 (4)C1—N1—C6—C7175.5 (3)
O1—C2—C3—C40.5 (4)O2—C10—C11—C12−173.7 (3)
C1—C2—C3—C4179.6 (3)O3—C10—C11—C126.0 (5)
C2—C3—C4—C5−0.5 (4)C10—C11—C12—C13−0.3 (5)
C3—C4—C5—O10.2 (4)C11—C12—C13—O4172.5 (3)
C3—C4—C5—I1−174.7 (3)C11—C12—C13—O5−6.8 (5)
D—H···AD—HH···AD···AD—H···A
O5—H5O···O31.18 (5)1.25 (5)2.425 (3)172 (4)
N1—H1A···O20.88 (4)1.97 (4)2.828 (3)167 (3)
N1—H1B···O4i0.88 (4)1.92 (4)2.792 (4)172 (3)
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

3.  Synthesis and in vitro pharmacology of 7-oxabicyclo[2.2.1]heptane analogues of thromboxane A2/PGH2.

Authors:  P W Sprague; J E Heikes; J Z Gougoutas; M F Malley; D N Harris; R Greenberg
Journal:  J Med Chem       Date:  1985-11       Impact factor: 7.446

Review 4.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

5.  SHELXT - integrated space-group and crystal-structure determination.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A Found Adv       Date:  2015-01-01       Impact factor: 2.290

6.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

  6 in total

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