| Literature DB >> 28431514 |
Ming-Yue Wu1,2, Yang Wu3, Yong Zhang4, Cai-Yun Liu5, Chun-Yan Deng6, Le Peng2, Lan Zhou7.
Abstract
BACKGROUND: Matrix metalloproteinases (MMPs) polymorphisms have been implicated in the pathogenesis of glaucoma risk. However, the results were controversial. We performed a meta-analysis to evaluate the precise associations between MMPs polymorphisms and glaucoma risk.Entities:
Keywords: Glaucoma; Matrix metalloproteinases; Polymorphism
Mesh:
Substances:
Year: 2017 PMID: 28431514 PMCID: PMC5401566 DOI: 10.1186/s12886-017-0442-2
Source DB: PubMed Journal: BMC Ophthalmol ISSN: 1471-2415 Impact factor: 2.209
Fig. 1Flow diagram of the study selection process
Characteristics of case–control studies on MMP-9 polymorphisms and glaucoma risk
| First author | Year | Country | Racial/descent | Type | Genotyping | Case | Control | Genotype distribution | P for HWE | Source of controls | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | ||||||||||||||
| rs17576 G > A | G/G | G/A | A/A | G/G | G/A | A/A | |||||||||
| Wang | 2006 | China | Asian | PACG | Applied Biosystems | 78 | 86 | 17 | 17 | 44 | 38 | 33 | 15 | 0.11 | Hospital-based |
| Aung | 2008 | Singaporean | Asian | PACG | Applied Biosystems | 217 | 83 | 135 | 69 | 13 | 48 | 31 | 4 | 0.72 | Healthy-based |
| Cong | 2009 | China | Asian | PACG | PCR-RFLP | 211 | 205 | 119 | 76 | 16 | 124 | 75 | 6 | 0.18 | Healthy-based |
| Mossböck1 | 2010 | Austria | Caucasian | POAG | PCR-RFLP | 322 | 248 | 42 | 141 | 139 | 26 | 120 | 102 | 0.28 | Hospital-based |
| Mossböck2 | 2010 | Austria | Caucasian | XGF | PCR-RFLP | 202 | 248 | 31 | 83 | 88 | 26 | 120 | 102 | 0.28 | Hospital-based |
| Awadalla | 2011 | Australian | Caucasian | PACG | Sequenom | 104 | 268 | 18 | 49 | 37 | 27 | 109 | 132 | 0.52 | Population-based |
| Shi | 2013 | China | Asian | PACG | Applied Biosystems | 231 | 306 | 133 | 78 | 20 | 164 | 113 | 29 | 0.15 | Population-based |
| Micheal1 | 2013 | Pakistan | Asian | PACG | PCR-RFLP | 82 | 118 | 35 | 32 | 15 | 25 | 53 | 40 | 0.34 | Healthy-based |
| Micheal2 | 2013 | Pakistan | Asian | POAG | PCR-RFLP | 112 | 118 | 38 | 48 | 26 | 25 | 53 | 40 | 0.34 | Healthy-based |
| rs17577 G > A | G/G | G/A | A/A | G/G | G/A | A/A | |||||||||
| Wang | 2006 | China | Asian | PACG | Applied Biosystems | 78 | 86 | 62 | 14 | 2 | 69 | 15 | 2 | 0.30 | Hospital-based |
| Awadalla | 2011 | Australian | Caucasian | PACG | Sequenom | 106 | 268 | 73 | 29 | 4 | 213 | 51 | 4 | 0.64 | Population-based |
| Gao | 2014 | China | Asian | PACG | PCR-RFLP | 214 | 224 | 166 | 44 | 4 | 178 | 43 | 3 | 0.83 | Hospital-based |
| rs3918249 C > T | C/C | C/T | T/T | C/C | C/T | T/T | |||||||||
| Awadalla | 2011 | Australian | Caucasian | PACG | Sequenom | 106 | 267 | 19 | 49 | 38 | 27 | 109 | 131 | 0.54 | Population-based |
| Shi | 2013 | China | Asian | PACG | Applied Biosystems | 231 | 306 | 133 | 79 | 19 | 160 | 116 | 30 | 0.19 | Population-based |
| Gao | 2014 | China | Asian | PACG | PCR-RFLP | 213 | 221 | 91 | 109 | 13 | 104 | 103 | 14 | 0.08 | Hospital-based |
| rs3918242 C > T | C/C | C/T | T/T | C/C | C/T | T/T | |||||||||
| Micheal1 | 2013 | Pakistan | Asian | PACG | PCR-RFLP | 82 | 118 | 56 | 25 | 1 | 74 | 37 | 7 | 0.42 | Healthy-based |
| Micheal2 | 2013 | Pakistan | Asian | POAG | PCR-RFLP | 112 | 118 | 70 | 40 | 2 | 74 | 37 | 7 | 0.42 | Healthy-based |
| Markiewicz | 2013 | Poland | Caucasian | POAG | PCR-RFLP | 255 | 256 | 166 | 83 | 6 | 195 | 56 | 5 | 0.68 | Hospital-based |
| rs3918254 C > T | C/C | C/T | T/T | C/C | C/T | T/T | |||||||||
| Awadalla | 2011 | Australian | Caucasian | PACG | Sequenom | 106 | 283 | 105 | 1 | 0 | 282 | 1 | 0 | 0.98 | Population-based |
| Gao | 2014 | China | Asian | PACG | PCR-RFLP | 214 | 220 | 125 | 85 | 4 | 122 | 81 | 17 | 0.49 | Hospital-based |
| rs3787268 G > A | G/G | G/A | A/A | G/G | G/A | A/A | |||||||||
| Awadalla | 2011 | Australian | Caucasian | PACG | Sequenom | 106 | 267 | 64 | 35 | 7 | 174 | 84 | 9 | 0.77 | Population-based |
| Gao | 2014 | China | Asian | PACG | PCR-RFLP | 207 | 220 | 82 | 112 | 13 | 89 | 108 | 23 | 0.24 | Hospital-based |
HWE in control
Test for heterogeneity
NA Not available
AB Applied Biosystems
PCR-RFLP Polymerase chain reaction-restriction fragment length polymorphism
PACG Primary angle-closure glaucoma
POAG Primary open angle glaucoma
XGF Exfoliation glaucoma
Characteristics of included studies on MMP-1 rs1799750 1G > 2G and MMP-2 rs243865C > T polymorphisms and glaucoma risk
| First author | Year | Country | Racial/descent | Type | Genotyping | Case | Control | Genotype distribution | P for HWE | Source of controls | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Control | ||||||||||||||
| rs1799750 1G > 2G | 1G/1G | 1G/2G | 2G/2G | 1G/1G | 1G/2G | 2G/2G | |||||||||
| Tsironi | 2009 | Greece | Caucasian | XFG | PCR-RFLP | 92 | 214 | 39 | 42 | 11 | 65 | 110 | 39 | 0.53 | Hospital-based |
| Mossböck1 | 2010 | Austria | Caucasian | POAG | PCR-RFLP | 322 | 248 | 42 | 141 | 139 | 26 | 120 | 102 | 0.28 | Hospital-based |
| Mossböck2 | 2010 | Austria | Caucasian | XFG | PCR-RFLP | 202 | 248 | 31 | 83 | 88 | 26 | 120 | 102 | 0.28 | Hospital-based |
| Markiewicz | 2013 | Poland | Caucasian | POAG | PCR-RFLP | 255 | 256 | 93 | 77 | 85 | 94 | 113 | 49 | 0.15 | Hospital-based |
| Micheal1 | 2013 | Pakistan | Asian | PACG | PCR-RFLP | 82 | 118 | 25 | 36 | 21 | 53 | 45 | 20 | 0.06 | Healthy-based |
| Micheal2 | 2013 | Pakistan | Asian | POAG | PCR-RFLP | 112 | 118 | 27 | 49 | 36 | 53 | 45 | 20 | 0.06 | Healthy-based |
| rs243865C > T | C/C | C/T | T/T | C/C | C/T | T/T | |||||||||
| Mossböck1 | 2010 | Austria | Caucasian | POAG | PCR-RFLP | 322 | 248 | 187 | 111 | 24 | 138 | 88 | 22 | 0.15 | Hospital-based |
| Mossböck2 | 2010 | Austria | Caucasian | XFG | PCR-RFLP | 202 | 248 | 107 | 80 | 15 | 138 | 88 | 22 | 0.15 | Hospital-based |
| Kaminska | 2014 | Poland | Caucasian | POAG | PCR-RFLP | 268 | 311 | 159 | 89 | 20 | 175 | 123 | 13 | 0.13 | Hospital-based |
HWE in control
Test for heterogeneity
PCR-RFLP Polymerase chain reaction-restriction fragment length polymorphism
PACG Primary angle-closure glaucoma
Fig. 2Calculated OR and 95% CIs for the associations between MMP-9 rs17576 G > A polymorphism and glaucoma risk in the GA vs. GG model
Summary ORs and 95% CI of MMP-9 polymorphisms and glaucoma risk
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs17576 G > A | A vs. G | GA vs. GG | AA vs. GG | GA + AA vs. GG | AA vs. GG + GA | |||||||||||||||
| Total | 1.10 | 0.80-1.51 | 0.56 | 85.1 | 0.80 | 0.67-0.97 | 0.02 | 0 | 1.07 | 1.07 0.52-2.19 | 0.86 | 85.5 | 0.87 | 0.60-1.24 | 0.44 | 73.7 | 1.23 | 0.69-2.18 | 0.48 | 85.5 |
| Type | ||||||||||||||||||||
| PACG | 1.01 | 0.62-1.62 | 0.98 | 90.6 | 0.83 | 0.68-1.03 | 0.09 | 16.3 | 1.10 | 0.43-2.86 | 0.84 | 88.0 | 0.88 | 0.56-1.37 | 0.57 | 78.9 | 1.25 | 0.56-2.85 | 0.58 | 87.7 |
| POAG | 0.82 | 0.51-1.26 | 0.34 | 75.8 | 0.67 | 0.44-1.01 | 0.06 | 0 | 0.62 | 0.23-1.61 | 0.16 | 54.7 | 0.66 | 0.44-0.97 | 0.03 | 0 | 0.84 | 0.46-1.52 | 0.56 | 68.7 |
| XFG | 0.95 | 0.72-1.25 | 0.71 | NA | 0.58 | 0.32-1.05 | 0.07 | NA | 0.90 | 0.50-1.62 | 0.29 | NA | 0.65 | 0.37-1.13 | 0.13 | NA | 1.10 | 0.76-1.61 | 0.60 | NA |
| Ethnicity | ||||||||||||||||||||
| Asian | 1.27 | 0.83-1.96 | 0.27 | 86.4 | 0.85 | 0.68-1.50 | 0.13 | 13.0 | 1.41 | 0.49-4.06 | 0.52 | 88.6 | 0.98 | 0.62-1.56 | 0.94 | 79.5 | 1.55 | 0.60-4.01 | 0.34 | 88.2 |
| Caucasian | 0.80 | 0.50-1.22 | 0.30 | 77.5 | 0.67 | 0.45-1.00 | 0.05 | 0 | 0.61 | 0.33-1.12 | 0.11 | 52.0 | 0.66 | 0.45-0.97 | 0.03 | 0 | 0.81 | 0.43-1.53 | 0.52 | 81.0 |
| Design | ||||||||||||||||||||
| Heal-B | 1.08 | 0.88-1.33 | 0.46 | 0 | 0.79 | 0.52-1.18 | 0.25 | 50.1 | 1.00 | 0.26-3.81 | 1.00 | 84.7 | 0.78 | 0.44-1.37 | 0.38 | 76.5 | 1.14 | 0.39-3.37 | 0.81 | 79.0 |
| Hosp-B | 1.83 | 0.51-6.54 | 0.35 | 96.0 | 0.77 | 0.50-1.17 | 0.22 | 20.7 | 2.22 | 0.28-17.62 | 0.45 | 94.6 | 1.40 | 0.37-5.35 | 0.62 | 90.3 | 2.51 | 0.46-13.57 | 0.27 | 94.7 |
| Pop-B | 0.76 | 0.55-1.05 | 0.10 | 57.2 | 0.81 | 0.58-1.12 | 0.20 | 0 | 0.61 | 0.31-1.22 | 0.16 | 54.7 | 0.73 | 0.48-1.12 | 0.15 | 35.3 | 0.68 | 0.47-0.98 | 0.04 | 30.6 |
| Genotyping | ||||||||||||||||||||
| AB | 1.40 | 0.62-3.20 | 0.42 | 92.9 | 0.86 | 0.65-1.15 | 0.32 | 0 | 1.87 | 0.48-7.29 | 0.37 | 87.3 | 1.20 | 0.62-2.30 | 0.59 | 80.5 | 1.93 | 0.52-7.18 | 0.32 | 88.0 |
| PCR-RFLP | 1.05 | 0.89-1.23 | 0.57 | 0 | 0.74 | 0.48-1.13 | 0.16 | 55.7 | 0.86 | 0.32-2.29 | 0.76 | 84.1 | 0.74 | 0.42-1.30 | 0.30 | 77.1 | 1.05 | 0.51-2.16 | 0.89 | 81.2 |
| rs17577 G > A | A vs. G | GA vs. GG | AA vs. GG | GA + AA vs. GG | AA vs. GG + GA | |||||||||||||||
| Total | 1.30 | 0.98-1.72 | 0.07 | 12.0 | 1.26 | 0.91-1.74 | 0.16 | 0 | 1.79 | 0.71-4.48 | 0.22 | 0 | 1.30 | 0.95-1.78 | 0.10 | 2.3 | 1.70 | 0.68-4.24 | 0.26 | 0 |
| Ethnicity | ||||||||||||||||||||
| Asian | 1.11 | 0.78-1.58 | 0.58 | 0 | 1.08 | 0.72-1.62 | 0.70 | 0 | 1.31 | 0.39-4.34 | 0.66 | 0 | 1.10 | 0.78-1.58 | 0.64 | 0 | 1.29 | 0.39-4.27 | 0.68 | 0 |
| Design | ||||||||||||||||||||
| Hosp-B | 1.11 | 0.78-1.58 | 0.58 | 0 | 1.08 | 0.72-1.62 | 0.70 | 0 | 1.31 | 0.39-4.34 | 0.66 | 0 | 1.10 | 0.78-1.58 | 0.64 | 0 | 1.29 | 0.39-4.27 | 0.68 | 0 |
| rs3918249 C > T | T vs. C | CT vs. CC | TT vs. CC | CT + TT vs. CC | TT vs. CC + CT | |||||||||||||||
| Total | 0.84 | 0.62-1.14 | 0.27 | 67.9 | 0.91 | 0.65-1.28 | 0.59 | 41.0 | 0.68 | 0.46-1.02 | 0.06 | 39.9 | 0.84 | 0.56-1.47 | 0.40 | 63.1 | 0.71 | 0.51-0.98 | 0.04 | 0 |
| Ethnicity | ||||||||||||||||||||
| Asian | 0.96 | 0.73-1.25 | 0.75 | 43.9 | 0.99 | 0.68-1.45 | 0.96 | 50.9 | 0.86 | 0.53-1.40 | 0.55 | 0 | 0.97 | 0.66-1.42 | 0.89 | 55.0 | 0.87 | 0.54-1.40 | 0.58 | 0 |
| Design | ||||||||||||||||||||
| Heal-B | 0.74 | 0.56-0.98 | 0.03 | 41.6 | 0.77 | 0.56-1.07 | 0.12 | 0 | 0.57 | 0.31-1.04 | 0.07 | 40.9 | 0.73 | 0.54-0.99 | 0.05 | 32.7 | 0.66 | 0.46-0.95 | 0.03 | 0 |
| rs3918242 C > T | T vs. C | CT vs. CC | TT vs. CC | CT + TT vs. CC | TT vs. CC + CT | |||||||||||||||
| Total | 1.13 | 0.60-2.13 | 0.70 | 82.5 | 1.37 | 0.82-2.28 | 0.23 | 61.7 | 0.62 | 0.11-3.33 | 0.58 | 70.5 | 1.27 | 0.68-2.36 | 0.46 | 78.5 | 0.57 | 0.12-2.68 | 0.48 | 65.4 |
| Type | ||||||||||||||||||||
| POAG | 1.20 | 0.69-2.06 | 0.52 | 73.0 | 1.51 | 1.09-2.08 | 0.01 | 31.8 | 0.72 | 0.16-3.23 | 0.67 | 56.2 | 1.36 | 0.81-2.28 | 0.24 | 59.7 | 0.65 | 0.16-2.64 | 0.55 | 50.1 |
| Design | ||||||||||||||||||||
| Heal-B | 0.81 | 0.57-1.13 | 0.22 | 0 | 1.02 | 0.98-1.54 | 0.91 | 0 | 0.25 | 0.07-0.92 | 0.04 | 0 | 0.92 | 0.60-1.34 | 0.60 | 0 | 0.25 | 0.07-0.89 | 0.03 | 0 |
| rs3918254 C > T | T vs. C | CT vs. CC | TT vs. CC | CT + TT vs. CC | TT vs. CC + CT | |||||||||||||||
| Total | 0.80 | 0.58-1.09 | 0.15 | 0 | 1.04 | 0.71-1.54 | 0.83 | 0 | NA | NA | NA | NA | 0.90 | 0.62-1.32 | 0.60 | 0 | NA | NA | NA | NA |
| rs3787268 G > A | A vs. G | GA vs. GG | AA vs. GG | GA + AA vs. GG | AA vs. GG + GA | |||||||||||||||
| Total | 1.06 | 0.78-1.43 | 0.72 | 40.3 | 1.13 | 0.83-1.54 | 0.44 | 0 | 1.08 | 0.32-3.62 | 0.90 | 72.7 | 1.11 | 0.83-1.50 | 0.49 | 0 | 1.02 | 0.30-3.51 | 0.97 | 75 |
a Test for heterogeneity
Heal-B Healthy-based
Hosp-B Hospital controls
Pop-B Population controls
NA Not available
AB Applied Biosystems
PCR-RFLP Polymerase chain reaction-restriction fragment length polymorphism
PACG Primary angle-closure glaucoma
POAG Primary open angle glaucoma
Fig. 3Sensitivity analysis via deletion of each individual study reflects the relative influence of each individual dataset on the pooled ORs in the GA vs. GG model of MMP-9 rs17576 G > A polymorphism and glaucoma risk
Fig. 4Cumulative meta-analyses according to publication year in the GA vs. GG model of MMP-9 rs17576 G > A polymorphism and glaucoma risk
Fig. 5Funnel plot analysis to detect publication bias for GA vs. GG model of MMP-9 rs17576 G > A polymorphism and glaucoma risk. Circles represent the weight of the studies
Summary ORs and 95% CI of MMP-1 rs1799750 1G > 2G and MMP-2 rs243865C > T polymorphisms and glaucoma risk
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs1799750 1G > 2G | 2G vs. 1G | 1G/2G vs. 1G/1G | 2G/2G vs. 1G/1G | 1G/2G +2G/2G vs. 1G/1G | 2G/2G vs. 1G/1G +1G/2G | |||||||||||||||
| Total | 1.14 | 0.79-1.64 | 0.49 | 85.0 | 0.86 | 0.52-1.41 | 0.55 | 75.7 | 1.20 | 0.59-2.43 | 0.61 | 83.4 | 0.99 | 0.59-1.69 | 0.98 | 81.8 | 1.35 | 0.83-2.21 | 0.23 | 77.2 |
| Type | ||||||||||||||||||||
| PACG | 1.61 | 1.07-2.42 | 0.02 | NA | 1.70 | 0.89-3.24 | 0.11 | NA | 2.33 | 1.03-4.83 | 0.04 | NA | 1.86 | 1.03-3.37 | 0.04 | NA | 1.69 | 0.85-3.37 | 0.14 | NA |
| POAG | 137 | 0.94-2.01 | 0.11 | 81.7 | 1.00 | 0.51-1.93 | 0.99 | 79.7 | 1.69 | 0.81-3.50 | 0.16 | 80.0 | 1.24 | 0.66-2.33 | 0.50 | 8.07 | 1.69 | 1.01-2.81 | 0.05 | 7.54 |
| XFG | 0.82 | 0.59-1.12 | 0.23 | 51.6 | 0.61 | 0.41-0.91 | 0.02 | 0 | 0.62 | 0.38-0.99 | 0.05 | 0 | 0.62 | 0.42-0.90 | 0.01 | 0 | 0.89 | 0.51-1.56 | 0.69 | 5.17 |
| Design | ||||||||||||||||||||
| Heal-B | 1.87 | 1.34-2.61 | <0.01 | NA | 1.93 | 1.14-3.26 | 0.02 | NA | 2.90 | 1.54-5.49 | <0.01 | NA | 2.23 | 1.37-3.61 | <0.01 | NA | 2.04 | 1.15-3.61 | 0.02 | NA |
| Hosp-B | 0.98 | 0.69-1.38 | 0.91 | 79.4 | 0.67 | 0.51-0.88 | <0.01 | 0 | 0.91 | 0.44-1.90 | 0.82 | 80.4 | 0.81 | 0.63-1.04 | 0.10 | 36.1 | 1.18 | 0.65-2.16 | 0.58 | 81.7 |
| rs243865 C > T | T vs. C | CT vs. CC | TT vs. CC | CT + TT vs. CC | TT vs. CC + CT | |||||||||||||||
| Total | 0.78 | 0.82-1.17 | 0.79 | 0 | 0.91 | 0.72-1.15 | 0.43 | 3.4 | 1.14 | 0.57-2.28 | 0.71 | 56.3 | 0.94 | 0.75-1.17 | 0.55 | 0 | 1.19 | 0.54-.2.62 | 0.66 | 67.4 |
| Type | ||||||||||||||||||||
| POAG | 95 | 0.79-1.15 | 0.62 | 0 | 0.86 | 0.67-1.10 | 0.23 | 0 | 1.14 | 0.55-2.35 | 0.73 | 56.8 | 0.89 | 0.71-1.13 | 0.35 | 0 | 1.21 | 0.55-1.65 | 0.64 | 64.5 |
a Test for heterogeneity
Heal-B Healthy-based
Hosp-B Hospital controls
NA Not available
PACG Primary angle-closure glaucoma
POAG Primary open angle glaucoma
XGF Exfoliation glaucoma