| Literature DB >> 28422730 |
Daojiang Li1, Lu Xia2, Miao Chen1, Changwei Lin1,3, Hao Wu1, Yi Zhang1, Songqing Pan2, Xiaorong Li1,3.
Abstract
MicroRNAs, a family of single-stranded and non-coding RNAs, play a crucial role in regulating gene expression at posttranscriptional level, by which it can mediate various types of physiological and pathological process in normal developmental progress and human disease, including cancer. The microRNA-133b originally defined as canonical muscle-specific microRNAs considering their function to the development and health of mammalian skeletal and cardiac muscles, but new findings coming from our group and others revealed that miR-133b have frequently abnormal expression in various kinds of human cancer and its complex complicated regulatory networks affects the tumorigenicity and development of malignant tumors. Very few existing reviews on miR-133b, until now, are principally about its role in homologous cluster (miR-1, -133 and -206s), however, most of constantly emerging new researches now are focused mainly on one of them, so In this article, to highlight the unique pathological role of miR-133b playing in tumor, we conduct a review to summarize the current understanding about one of the muscle-specific microRNAs, namely miR-133b, acting in human cancer. The review focused on the following four aspects: the overview of miR-133b, the target genes of miR-133b involved in human cancer, the expression of miR-133b and regulatory mechanisms leading to abnormal expression of miR-133b.Entities:
Keywords: cancer; miR-133b; microRNAs; myomiRs; tumor
Mesh:
Substances:
Year: 2017 PMID: 28422730 PMCID: PMC5564843 DOI: 10.18632/oncotarget.16745
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1The overview of miR-133b
(A) The representative gene structure of miR-133b/miR-206 clusters and the mature miRNA sequence of these two miRNAs; miR-133b/miR-206 clusters located in on chromosomes 6p12.2 and miR-133b gene transcript is located within the precursor of the long non-coding RNA linc-MD1. (B) The research proportion of 4 different myomiRs in all literatures and the literatures on cancer. The study of miR-133b is proportionately less and more research of it is about caner. (C) The year distribution of study of miR-133b with cancer. (D) The research categories of miR-133b were involved in tumor, the majority of the study about miR-133b focuses on pathomechanism. (E) The proportion of miR-133b in various cancers, the majority of the study about miR-133b focuses on digestive tract neoplasms. Bladder cancer (BCs); colorectal cancer(CRC); hepatocellular carcinoma(HC); lung cancer(LC); glioma(GL); ovarian cancer(OC); prostate cancer(PCs); gastric cancer(GC); pancreatic cancer(PC); esophagus cancer(EC); myeloid leukemia(ML); osteosarcoma(OsC); renal carcinoma(RC); breast cancer(BC); pheochromocytoma and paraganglioma(PP); Uterine sarcoma(UC); small bowel gastrointestinal stromal tumors (GIST); review(R); cervical carcinoma(CC); head-neck carcinoma(HNC);Carcinoma of Tongue(TC); laryngeal cancer(LnC); nasopharyngeal carcinoma(NC); comprehensive papers involved several human cancer(CP).
Figure 2Enrichment analysis of the target genes of miR-133b
(A) the experimentally validated genes and predicted targets supported by CLIP-Seq data were selected, the database miRTarBase 6.0 and DIANA-TarBase v7.0 provieded 80 and 66 experimentally validated genes, respectively; the starBase v2.0 provided 641 predicted targets supported by CLIP-Seq data, the CLIP-Seq data can explore anti-correlation (pearson correlation: r < 0, p-value < 0.05) between miRNA and target genes across diverse cancer types (more details can be found in Supplementary Table 1). (B) The representative CLIP-Seq data about anti-correlation between miR-133b and target genes. SUMO2 gene vs. miR-133b in Colon and Rectal adenocarcinoma (CRC) and CLTA gene vs. miR-133b in papillary thyroid carcinoma (THCA) were listed in here. (C) Enrichment analysis of KEGG pathway through Enricher, 13 top statistically enriched results was listed here, more details can be found in Supplementary Table 2. (D) Enrichment analysis of OMIM Disease through Enricher, 14 top statistically enriched results was listed here, more details can be found in Supplementary Table 2.
Figure 3Tumor suppressive signatures of miR-133b involved in human cancer and its regulatory mechanism
(A) The histone modification, promoter DNA hypermethylation and transcription factor including androgen receptor (AR) and tumor protein p63(TAp63) directly mediate miR-133b expression; miR-145 and Long non-coding RNAs (lncRNAs) may directly and indirectly regulate the expression of miR-133b. Me: methylation of histone and CpG island in promoter region. AC: acetylation; A# Regulatory network of miR-133b involved in altered energy metabolism of cancer cells. miR-133b control PKM expression (switching of PKM1 to PKM2) through targeting polypyrimidine tract-binding protein 1 (PTB1) or directly target PKM2 gene. (B) miR-133b can regulate the PI3K/AKT, MARK and STAT signaling pathways to participate in the occurrence and development of tumor by targeting epidermal growth factor receptor (EGFR), mammalian sterile 20-like kinase 2(MST2), cell division control protein 42 homolog (CDC42) or ras homolog gene family member A (RHOA); In glioblastoma (GBM) microvasculature, miR-133b, targeting and curbing EGFR indirectly elevated the expression of the platelet-derived growth factor receptor beta (PDGFRB). (C) Modulatory network of miR-133b in cancer cell proliferation, apoptosis and invasion. MiR-133b can participate in cancer cell proliferation; apoptosis and invasion through directly suppressing the gene including DR5, FAIM, GSTP1, CDC2L5, PTPRK, RB1CC1, CPNE3, MCL-1, BCL2L2, Mcl-1, Bcl-xL, FGFR1, Sp1, TBPL1, hERG, Kv11.1, KCNH2, CTGF, Nup214, c-Met, Sirt1 and S1PR1. These target genes directly or indirectly activate biological pathways to be involved in human cancer cell proliferation, apoptosis and invasion.
The expression of miR-133b and its related targeting genes involved in human cancer
| No. | Cancer types | Related gene | Desription | Function | Re. |
|---|---|---|---|---|---|
| 1(+) | Hepatocellular carcinoma | PPP2R2D(−) | one of four isoforms (α, β, γ, and δ) of the protein phosphatase 2A | cell cycle regulation | [ |
| 2(−) | NSCLC (radioresistant) | PKM2(+) | pyruvate kinase isoform M2 | inhibition of PKM2-mediated glycolysis | [ |
| 3(−) | Colorectal adenoma and cancer | PTB1;PKM2(+)/PKM1(−) | polypyrimidine tract-binding protein 1; Pyruvate kinase muscle has 2 isoforms | switch their PKM isoform from PKM1 to PKM2 and promotes the Warburg effect | [ |
| 4(−) | Ovarian cancer(chemotherapy resistance) | GST-π /MDR1(+) | glutathione S-transferase (GST)-π and multidrug resistance protein 1 (MDR1) | reduce ovarian cancer drug resistance | [ |
| 5(+) | glioblastoma (GMP) | EGFR (−) | epidermal growth factor receptor | microvascular proliferation | [ |
| 7(−) | Glioblastoma | MMP14)(+) | matrix metalloproteinase 14 | inhibits cell migration and invasion | [ |
| 8(−) | Ovarian cancer | EGFR(+) | epidermal growth factor receptor | inhibit proliferation and invasion | [ |
| 9(+) | Cancer associated fibroblasts (CAF) | IL6 (untargeted gene) | interleukin-6 | IL6-HPFs and (cancer associated fibroblasts) CAFs | [ |
| 10(?) | *DLD-1, #MCF10A cells | DR5(−) | death receptors 5 | induces apoptosis | [ |
| 11(/) | (HeLa cells)cervical cancer | FAIM/GSTP1 | antiapoptotic protein Fas apoptosis inhibitory molecule/detoxifying protein glutathione-S-transferase pi | induces apoptosis | [ |
| 12(−) | Androgen-independentprostate cancer | FAIM/GSTP1(+) | antiapoptotic protein Fas apoptosis inhibitory molecule/detoxifying protein glutathione-S-transferase pi | impaired proliferation and cellular metabolic activity and induces apoptosis | [ |
| 13(−) | Colorectal cancer | c-Met(+) | MET proto-oncogene, receptor tyrosine kinase | effect the proliferation and apoptosis | [ |
| 14(−) | Squamous cell carcinoma of tongue | PKM2(+) | pyruvate kinase isoform M2 | interfere with the efficiency of proliferation and apoptosis | [ |
| 15(−) | Lung cancer | MCL-1/ BCL2L2 (BCLw)(+) | members of the B-cell CLL/lymphoma 2 (BCL-2) family of apoptotic molecules | induces apoptosis | [ |
| 16(−) | ESCC | FSCN1(+) | fascin actin-bundling protein 1 | cell growth and invasion inhibition | [ |
| 17(+) | Cervical carcinoma | MST2/CDC42/RHOA(−) | mammalian sterile 20-like kinase 2/cell division control protein 42 homolog/ras homolog gene family member A | results in activation of AKT1 and ERK signaling pathways, and promotes both | [ |
| 18(−) | Prostate cancer | EGFR(+) | epidermal growth factor receptor | inhibited cell proliferation, migration and invasion | [ |
| 19(−) | Non-small cell lung cance | EGFR(+) | epidermal growth factor receptor | modulate apoptosis, invasion and sensitivity to EGFR-TKI | [ |
| 20(−) | Gastrointestinal stromal tumor | FSCN1(+) | fascin actin-bundling protein 1 | tumor size, mitotic counts, risk grade, blood vessel invasion and mucosal ulceration | [ |
| 21(−) | Bladder cancer | EGRR(+) | epidermal growth factor receptor | inhibits cell proliferation, migration and invasion | [ |
| 22(−) | Osteosarcoma | MET(+) | MET proto-oncogene, receptor tyrosine kinase | control cell proliferation and cell cycle | [ |
| 23(−) | Gastric cancer | FGFR1(+) | fibroblast growth factor receptor-like 1 | inhibit cell proliferation and colony formation | [ |
| 24(+) | Androgen-dependent Pca | CDC2L5, PTPRK, RB1CC1, and CPNE3(−) | encoded CDK13, tyrosine phosphatase (PTP) family, transcription factor termed RB1-inducible coiled-coil 1, calcium-dependent membrane-binding protein termed copine III | promoting cell survival and proliferation, basically required for mediating AR signalling to PCa cell viability and survival | [ |
| 25(−) | Colorectal cancer | CXCR4(+) | C-X-C motif chemokine receptor 4 | inhibited invasion and stimulated apoptosis | [ |
| 25(−) | Osteosarcoma | BCL2L2, MCL-1, IGF1R, MET(+) | lymphoma 2 (BCL-2) family of apoptotic molecules, members of the B-cell CLL, insulin like growth factor 1 receptor, MET proto-oncogene, receptor tyrosine kinase | inhibited cell proliferation, invasion and migration, and induced apoptosis | [ |
| 26(−) | Gastric cancer | Gli1(+) | GLI family zinc finger 1, Zeb2 and OPN are direct transcriptional targets of Gli1 | inhibits cell migration and invasion | [ |
| 27(−) | Colon cancer | RhoA, TAp63 (untargeted gene)(−) | ras homolog gene family member A, tumor protein p63, microRNA-133b is a transcriptional target of TAp63 | TAp63 inhibits cell migration and invasion through microRNA-133b | [ |
| 28(+/–) | Prostate cancer | RB1CC1(−) | RB1 inducible coiled-coil 1 | effect the cell proliferation, cell cycle, and apoptosis | [ |
| 29(−) | Colorectal cancer | TBPL1(+) | TATA-box binding protein like 1 | proliferation | [ |
| 30(−) | Gastric cancer | Sp1(+) | Sp1 transcription factor | inhibit proliferation, migration, invasion and cell cycle progression | [ |
| 31(−) | Glioma | hERG, Kv11.1, KCNH2(+) | the human ether-a-go-go-related gene potassium channel | inhibition of proliferation of and induced apoptosis | [ |
| 32(−) | Bladder cancer | BCL2L2(Bcl-w), Akt1(+) | Bcl-2-like protein 2, serine/threonine kinase 1 | inhibition of proliferation of and induced apoptosis | [ |
| 33(−) | Gastric cancer | FSCN1(+) | Fascin actin-bundling protein 1 | inhibit cell proliferation, cell migration and invasion | [ |
| 34(−) | Several human cancer | Nup214(+) | nucleoporin 214 | perturbs mitotic timing and leads to cell death | [ |
| 35(−) | Colorectal cancer | EGFR | epidermal growth factor receptor | inhibit growth and invasion | [ |
| 36(−) | Gastric cancer | Mcl-1, Bcl-xL(+) | BCL2 family apoptosis regulator | suppress GC cell proliferation and promote cell apoptosis | [ |
| 37(−) | Glioma | Sirt1(+) | silent information regulator 1 | reduced the proliferation and invasion | [ |
| 38(−) | Hepatocellular carcinoma | Sirt1(+) | silent information regulator 1 | regulating HCC cell proliferation, invasion and apoptosis | [ |
| 39(−) | Nasopharyngeal carcinoma | S1PR1(+) | Sphingosine-1-phosphate receptor 1 | suppresses cell proliferation | [ |
| 40(−) | Hepatocellular carcinoma | CTGF(+) | Connective tissue growth factor | influences HCC cell proliferation and migration, and ductular reaction (DR)/oval cell (OC) response | [ |
HPF: human prostate fibroblasts;* DLD-1 cell line, TRAIL-resistant human colon cancer; # MCF10A cells, breast epithelial proliferating; -: decreased expression; +: increase expression. Re.: reference; GMP: Glioblastoma microvascular proliferation; ESCC: Esophageal squamous cell carcinoma
Figure 4The dual expression of miR-133b in human cancer
The database OncoLnc was used to explore survival correlations of miR-133b in cancer, the database provided 9 cancer data between miR-133b and human cancer, the Cox coefficient and p-value are from the gene term in precomputed multivariate Cox regressions and the FDR correction is performed per cancer analysis per data type (left); the representative example of OncoLnc Kaplan-Meier results(right), in head and neck squamous cell carcinoma(HNSC), the low expression of miR-133b have a higher survival rate(upper right); in Cervical cancer (CESC), the high expression of miR-133b have a higher survival rate(lower right). More details and abbreviation can be found in TCGA(https://cancergenome.nih.gov/) and OncoLnc(http://www.oncolnc.org/).