Literature DB >> 28416684

Discovery of chemoautotrophic symbiosis in the giant shipworm Kuphus polythalamia (Bivalvia: Teredinidae) extends wooden-steps theory.

Daniel L Distel1, Marvin A Altamia2, Zhenjian Lin3, J Reuben Shipway4, Andrew Han5, Imelda Forteza2, Rowena Antemano2, Ma Gwen J Peñaflor Limbaco2, Alison G Tebo6, Rande Dechavez7, Julie Albano7, Gary Rosenberg8, Gisela P Concepcion2,9, Eric W Schmidt3, Margo G Haygood10.   

Abstract

The "wooden-steps" hypothesis [Distel DL, et al. (2000) Nature 403:725-726] proposed that large chemosynthetic mussels found at deep-sea hydrothermal vents descend from much smaller species associated with sunken wood and other organic deposits, and that the endosymbionts of these progenitors made use of hydrogen sulfide from biogenic sources (e.g., decaying wood) rather than from vent fluids. Here, we show that wood has served not only as a stepping stone between habitats but also as a bridge between heterotrophic and chemoautotrophic symbiosis for the giant mud-boring bivalve Kuphus polythalamia This rare and enigmatic species, which achieves the greatest length of any extant bivalve, is the only described member of the wood-boring bivalve family Teredinidae (shipworms) that burrows in marine sediments rather than wood. We show that K. polythalamia harbors sulfur-oxidizing chemoautotrophic (thioautotrophic) bacteria instead of the cellulolytic symbionts that allow other shipworm species to consume wood as food. The characteristics of its symbionts, its phylogenetic position within Teredinidae, the reduction of its digestive system by comparison with other family members, and the loss of morphological features associated with wood digestion indicate that K. polythalamia is a chemoautotrophic bivalve descended from wood-feeding (xylotrophic) ancestors. This is an example in which a chemoautotrophic endosymbiosis arose by displacement of an ancestral heterotrophic symbiosis and a report of pure culture of a thioautotrophic endosymbiont.

Entities:  

Keywords:  Teredinidae; chemoautotrophy; shipworm; symbiosis; thioautotrophy

Mesh:

Year:  2017        PMID: 28416684      PMCID: PMC5422788          DOI: 10.1073/pnas.1620470114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Colonization of organic substrates deployed in deep-sea reducing habitats by symbiotic species and associated fauna.

Authors:  S M Gaudron; F Pradillon; M Pailleret; S Duperron; N Le Bris; F Gaill
Journal:  Mar Environ Res       Date:  2010-02-20       Impact factor: 3.130

2.  Extensive variation in intracellular symbiont community composition among members of a single population of the wood-boring bivalve Lyrodus pedicellatus (Bivalvia: Teredinidae).

Authors:  Yvette A Luyten; Janelle R Thompson; Wendy Morrill; Martin F Polz; Daniel L Distel
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

3.  Molecular phylogeny in mytilids supports the wooden steps to deep-sea vents hypothesis.

Authors:  Sarah Samadi; Erwan Quéméré; Julien Lorion; Annie Tillier; Rudo von Cosel; Philippe Lopez; Corinne Cruaud; Arnaud Couloux; Marie-Catherine Boisselier-Dubayle
Journal:  C R Biol       Date:  2007-05-17       Impact factor: 1.583

4.  Sulphur-oxidizing extracellular bacteria in the gills of Mytilidae associated with wood falls.

Authors:  Sébastien Duperron; Mélina C Z Laurent; Françoise Gaill; Olivier Gros
Journal:  FEMS Microbiol Ecol       Date:  2008-01-19       Impact factor: 4.194

5.  A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.

Authors:  Heng Li
Journal:  Bioinformatics       Date:  2011-09-08       Impact factor: 6.937

6.  Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk.

Authors:  Roberta M O'Connor; Jennifer M Fung; Koty H Sharp; Jack S Benner; Colleen McClung; Shelley Cushing; Elizabeth R Lamkin; Alexey I Fomenkov; Bernard Henrissat; Yuri Y Londer; Matthew B Scholz; Janos Posfai; Stephanie Malfatti; Susannah G Tringe; Tanja Woyke; Rex R Malmstrom; Devin Coleman-Derr; Marvin A Altamia; Sandra Dedrick; Stefan T Kaluziak; Margo G Haygood; Daniel L Distel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-10       Impact factor: 11.205

7.  Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.

Authors:  Chen-Shan Chin; David H Alexander; Patrick Marks; Aaron A Klammer; James Drake; Cheryl Heiner; Alicia Clum; Alex Copeland; John Huddleston; Evan E Eichler; Stephen W Turner; Jonas Korlach
Journal:  Nat Methods       Date:  2013-05-05       Impact factor: 28.547

8.  Dynamics of wood fall colonization in relation to sulfide concentration in a mangrove swamp.

Authors:  Mélina C Z Laurent; Nadine Le Bris; Françoise Gaill; Olivier Gros
Journal:  Mar Environ Res       Date:  2013-04-15       Impact factor: 3.130

9.  Genome streamlining and chemical defense in a coral reef symbiosis.

Authors:  Jason C Kwan; Mohamed S Donia; Andrew W Han; Euichi Hirose; Margo G Haygood; Eric W Schmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

10.  The contrasted evolutionary fates of deep-sea chemosynthetic mussels (Bivalvia, Bathymodiolinae).

Authors:  Justine Thubaut; Nicolas Puillandre; Baptiste Faure; Corinne Cruaud; Sarah Samadi
Journal:  Ecol Evol       Date:  2013-10-31       Impact factor: 2.912

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  23 in total

1.  Cryptic niche switching in a chemosymbiotic gastropod.

Authors:  Chong Chen; Katrin Linse; Katsuyuki Uematsu; Julia D Sigwart
Journal:  Proc Biol Sci       Date:  2018-07-11       Impact factor: 5.349

Review 2.  Convergent evolution of signal-structure interfaces for maintaining symbioses.

Authors:  Reed M Stubbendieck; Hongjie Li; Cameron R Currie
Journal:  Curr Opin Microbiol       Date:  2019-11-07       Impact factor: 7.934

Review 3.  Parallel lives of symbionts and hosts: chemical mutualism in marine animals.

Authors:  Maho Morita; Eric W Schmidt
Journal:  Nat Prod Rep       Date:  2018-04-25       Impact factor: 13.423

4.  Mindapyrroles A-C, Pyoluteorin Analogues from a Shipworm-Associated Bacterium.

Authors:  Noel M Lacerna; Bailey W Miller; Albebson L Lim; Jortan O Tun; Jose Miguel D Robes; Mark Jeremiah B Cleofas; Zhenjian Lin; Lilibeth A Salvador-Reyes; Margo G Haygood; Eric W Schmidt; Gisela P Concepcion
Journal:  J Nat Prod       Date:  2019-02-22       Impact factor: 4.050

5.  Contrasting modes of mitochondrial genome evolution in sister taxa of wood-eating marine bivalves (Teredinidae and Xylophagaidae).

Authors:  Yuanning Li; Marvin A Altamia; J Reuben Shipway; Mercer R Brugler; Angelo Fraga Bernardino; Thaís Lima de Brito; Zhenjian Lin; Francisca Andréa da Silva Oliveira; Paulo Sumida; Craig R Smith; Amaro Trindade-Silva; Kenneth M Halanych; Daniel L Distel
Journal:  Genome Biol Evol       Date:  2022-06-17       Impact factor: 4.065

6.  Uncovering the molecular mechanisms of lignocellulose digestion in shipworms.

Authors:  Federico Sabbadin; Giovanna Pesante; Luisa Elias; Katrin Besser; Yi Li; Clare Steele-King; Meg Stark; Deborah A Rathbone; Adam A Dowle; Rachel Bates; J Reuben Shipway; Simon M Cragg; Neil C Bruce; Simon J McQueen-Mason
Journal:  Biotechnol Biofuels       Date:  2018-03-07       Impact factor: 6.040

7.  Secondary Metabolism in the Gill Microbiota of Shipworms (Teredinidae) as Revealed by Comparison of Metagenomes and Nearly Complete Symbiont Genomes.

Authors:  Marvin A Altamia; Zhenjian Lin; Amaro E Trindade-Silva; Iris Diana Uy; J Reuben Shipway; Diego Veras Wilke; Gisela P Concepcion; Daniel L Distel; Eric W Schmidt; Margo G Haygood
Journal:  mSystems       Date:  2020-06-30       Impact factor: 6.496

8.  The gill-associated microbiome is the main source of wood plant polysaccharide hydrolases and secondary metabolite gene clusters in the mangrove shipworm Neoteredo reynei.

Authors:  Thais L Brito; Amanda B Campos; F A Bastiaan von Meijenfeldt; Julio P Daniel; Gabriella B Ribeiro; Genivaldo G Z Silva; Diego V Wilke; Daniela T de Moraes; Bas E Dutilh; Pedro M Meirelles; Amaro E Trindade-Silva
Journal:  PLoS One       Date:  2018-11-14       Impact factor: 3.240

9.  The early conversion of deep-sea wood falls into chemosynthetic hotspots revealed by in situ monitoring.

Authors:  D Kalenitchenko; E Péru; L Contreira Pereira; C Petetin; P E Galand; N Le Bris
Journal:  Sci Rep       Date:  2018-01-17       Impact factor: 4.379

10.  Microbiomes In Natura: Importance of Invertebrates in Understanding the Natural Variety of Animal-Microbe Interactions.

Authors:  Jillian M Petersen; Jay Osvatic
Journal:  mSystems       Date:  2018-03-13       Impact factor: 6.496

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