Literature DB >> 28410145

A review of computational approaches detecting microRNAs involved in cancer.

Laura Cantini1, Michele Caselle2, Antoine Forget3, Andrei Zinovyev4, Emmanuel Barillot4, Loredana Martignetti4.   

Abstract

MicroRNAs (miRNAs) are small non-coding RNAs playing an essential role in gene expression regulation. Multiple studies have demonstrated that miRNAs are dysregulated in cancer initiation and progression, pointing out their potential as biomarkers for diagnosis, prognosis and response to treatment. With the introduction of high-throughput technologies several computational approaches have been proposed to identify cancer-associated miRNAs. Here, we present a systematic and comprehensive overview of the current knowledge concerning the computational detection of miRNAs involved in tumor onset and subtyping, with possible theranostic employment. An overview of the state of art in this field is thus proposed with the aim of supporting researchers, especially experimentalists and pathologists, in choosing the optimal approach for their case of study.

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Year:  2017        PMID: 28410145     DOI: 10.2741/4571

Source DB:  PubMed          Journal:  Front Biosci (Landmark Ed)        ISSN: 2768-6698


  5 in total

1.  MicroRNA Expression and Correlation with mRNA Levels of Colorectal Cancer-Related Genes.

Authors:  Farahnaz Moghadamnia; Pegah Ghoraeian; Sara Minaeian; Atefeh Talebi; Farnaz Farsi; Abolfazl Akbari
Journal:  J Gastrointest Cancer       Date:  2020-03

2.  Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer.

Authors:  Laura Cantini; Gloria Bertoli; Claudia Cava; Thierry Dubois; Andrei Zinovyev; Michele Caselle; Isabella Castiglioni; Emmanuel Barillot; Loredana Martignetti
Journal:  Nucleic Acids Res       Date:  2019-03-18       Impact factor: 16.971

3.  Aberrant expression of a five-microRNA signature in breast carcinoma as a promising biomarker for diagnosis.

Authors:  Amirreza Bitaraf; Sadegh Babashah; Masoud Garshasbi
Journal:  J Clin Lab Anal       Date:  2019-10-08       Impact factor: 2.352

4.  Multiomics Topic Modeling for Breast Cancer Classification.

Authors:  Filippo Valle; Matteo Osella; Michele Caselle
Journal:  Cancers (Basel)       Date:  2022-02-23       Impact factor: 6.639

Review 5.  Mechanistic Computational Models of MicroRNA-Mediated Signaling Networks in Human Diseases.

Authors:  Chen Zhao; Yu Zhang; Aleksander S Popel
Journal:  Int J Mol Sci       Date:  2019-01-19       Impact factor: 5.923

  5 in total

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