Literature DB >> 28401680

DNA methylation and its role in the pathogenesis of diabetes.

Amita Bansal1,2,3, Sara E Pinney1,2,4,5.   

Abstract

Although the factors responsible for the recent increase in the prevalence of diabetes worldwide are not entirely known, the morbidity associated with this disease results in substantial health and economic burden on society. Epigenetic modifications, including DNA methylation have been identified as one mechanism by which the environment interacts with the genome and there is evidence that alterations in DNA methylation may contribute to the increased prevalence of both type 1 and type 2 diabetes. This review provides a summary of DNA methylation and its role in gene regulation, and includes descriptions of various techniques to measure site-specific and genome-wide DNA methylation changes. In addition, we review current literature highlighting the complex relationship between DNA methylation, gene expression, and the development of diabetes and related complications. In studies where both DNA methylation and gene expression changes were reported, DNA methylation status had a strong inverse correlation with gene expression, suggesting that this interaction may be a potential future therapeutic target. We highlight the emerging use of genome-wide DNA methylation profiles as a biomarker to predict patients at risk of developing diabetes or specific complications of diabetes. The development of a predictive model that incorporates both genetic sequencing and DNA methylation data may be an effective diagnostic approach for all types of diabetes and could lead to additional innovative therapies.
© 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Entities:  

Keywords:  DNA methylation; epigenetics; insulin secretion; insulin sensitivity; islets; type 2 diabetes

Mesh:

Substances:

Year:  2017        PMID: 28401680      PMCID: PMC5394941          DOI: 10.1111/pedi.12521

Source DB:  PubMed          Journal:  Pediatr Diabetes        ISSN: 1399-543X            Impact factor:   4.866


  104 in total

1.  Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias.

Authors:  Shalima S Nair; Marcel W Coolen; Clare Stirzaker; Jenny Z Song; Aaron L Statham; Dario Strbenac; Mark D Robinson; Susan J Clark
Journal:  Epigenetics       Date:  2011-01-01       Impact factor: 4.528

2.  A novel variant of Inpp5f is imprinted in brain, and its expression is correlated with differential methylation of an internal CpG island.

Authors:  Jonathan D Choi; Lara A Underkoffler; Andrew J Wood; Joelle N Collins; Patrick T Williams; Jeffrey A Golden; Eugene F Schuster; Kathleen M Loomes; Rebecca J Oakey
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

3.  The liver X-receptor gene promoter is hypermethylated in a mouse model of prenatal protein restriction.

Authors:  Esther M E van Straten; Vincent W Bloks; Nicolette C A Huijkman; Julius F W Baller; Hester van Meer; Dieter Lütjohann; Folkert Kuipers; Torsten Plösch
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2009-11-04       Impact factor: 3.619

4.  Molecular and biochemical analysis of the MODY syndromes.

Authors:  W E Winter
Journal:  Pediatr Diabetes       Date:  2000-06       Impact factor: 4.866

5.  Development of type 2 diabetes following intrauterine growth retardation in rats is associated with progressive epigenetic silencing of Pdx1.

Authors:  Jun H Park; Doris A Stoffers; Robert D Nicholls; Rebecca A Simmons
Journal:  J Clin Invest       Date:  2008-06       Impact factor: 14.808

6.  Hypoglycaemia following diabetes remission in patients with 6q24 methylation defects: expanding the clinical phenotype.

Authors:  S E Flanagan; D J G Mackay; S A W Greeley; T J McDonald; V Mericq; J Hassing; E J Richmond; W R Martin; C Acerini; A M Kaulfers; D P Flynn; J Popovic; M A Sperling; K Hussain; S Ellard; A T Hattersley
Journal:  Diabetologia       Date:  2012-10-31       Impact factor: 10.122

7.  Insulin promoter DNA methylation correlates negatively with insulin gene expression and positively with HbA(1c) levels in human pancreatic islets.

Authors:  B T Yang; T A Dayeh; C L Kirkpatrick; J Taneera; R Kumar; L Groop; C B Wollheim; M D Nitert; C Ling
Journal:  Diabetologia       Date:  2010-11-23       Impact factor: 10.122

8.  Metabolic programming of MEST DNA methylation by intrauterine exposure to gestational diabetes mellitus.

Authors:  Nady El Hajj; Galyna Pliushch; Eberhard Schneider; Marcus Dittrich; Tobias Müller; Michael Korenkov; Melanie Aretz; Ulrich Zechner; Harald Lehnen; Thomas Haaf
Journal:  Diabetes       Date:  2012-12-03       Impact factor: 9.461

9.  Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells.

Authors:  Madeleine P Ball; Jin Billy Li; Yuan Gao; Je-Hyuk Lee; Emily M LeProust; In-Hyun Park; Bin Xie; George Q Daley; George M Church
Journal:  Nat Biotechnol       Date:  2009-03-29       Impact factor: 54.908

10.  Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences.

Authors:  Sebastian Moran; Carles Arribas; Manel Esteller
Journal:  Epigenomics       Date:  2015-12-17       Impact factor: 4.778

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  35 in total

1.  Perceived Racial Discrimination and DNA Methylation Among African American Women in the InterGEN Study.

Authors:  Veronica Barcelona de Mendoza; Yunfeng Huang; Cindy A Crusto; Yan V Sun; Jacquelyn Y Taylor
Journal:  Biol Res Nurs       Date:  2017-12-19       Impact factor: 2.522

Review 2.  Genetics of type 1 diabetes.

Authors:  Maria J Redondo; Andrea K Steck; Alberto Pugliese
Journal:  Pediatr Diabetes       Date:  2017-11-02       Impact factor: 4.866

Review 3.  Functional implications of the CpG island methylation in the pathogenesis of celiac disease.

Authors:  Souparni Ghosh; Preeti Khetarpal; Sabyasachi Senapati
Journal:  Mol Biol Rep       Date:  2022-05-28       Impact factor: 2.742

4.  Exploration of the pathogenesis of Sjögren's syndrome via DNA methylation and transcriptome analyses.

Authors:  Yu Du; Jie Li; Jianhong Wu; Fanxin Zeng; Chengsong He
Journal:  Clin Rheumatol       Date:  2022-05-13       Impact factor: 3.650

5.  DNA methylation near the INS gene is associated with INS genetic variation (rs689) and type 1 diabetes in the Diabetes Autoimmunity Study in the Young.

Authors:  Patrick M Carry; Lauren A Vanderlinden; Randi K Johnson; Fran Dong; Andrea K Steck; Brigitte I Frohnert; Marian Rewers; Ivana V Yang; Katerina Kechris; Jill M Norris
Journal:  Pediatr Diabetes       Date:  2020-02-28       Impact factor: 4.866

Review 6.  Diabetic keratopathy: Insights and challenges.

Authors:  S Priyadarsini; A Whelchel; S Nicholas; R Sharif; K Riaz; D Karamichos
Journal:  Surv Ophthalmol       Date:  2020-02-22       Impact factor: 6.048

7.  Urine as a high-quality source of host genomic DNA from wild populations.

Authors:  Andrew T Ozga; Timothy H Webster; Ian C Gilby; Melissa A Wilson; Rebecca S Nockerts; Michael L Wilson; Anne E Pusey; Yingying Li; Beatrice H Hahn; Anne C Stone
Journal:  Mol Ecol Resour       Date:  2020-10-17       Impact factor: 7.090

8.  The polymorphism of rs266729 in adiponectin gene and type 2 diabetes mellitus: A Meta-Analysis.

Authors:  Panpan Sun; Li Liu; Jiaxin Chen; Yuansi Chen; Litong Shi; Mustapha Umar Imam; Yanzi Chen; Xiaoting Pei; Yiping Xu; Yaxin Guo; Zhiguang Ping; Xiaoli Fu
Journal:  Medicine (Baltimore)       Date:  2017-11       Impact factor: 1.817

9.  miR29b regulates aberrant methylation in In-Vitro diabetic nephropathy model of renal proximal tubular cells.

Authors:  Piyush Gondaliya; Aishwarya Dasare; Akshay Srivastava; Kiran Kalia
Journal:  PLoS One       Date:  2018-11-29       Impact factor: 3.240

Review 10.  Abnormal Homocysteine Metabolism: An Insight of Alzheimer's Disease from DNA Methylation.

Authors:  Tingting Pi; Bo Liu; Jingshan Shi
Journal:  Behav Neurol       Date:  2020-09-08       Impact factor: 3.342

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