Literature DB >> 28398214

Aqueous ionic liquids and their effects on protein structures: an overview on recent theoretical and experimental results.

Jens Smiatek1.   

Abstract

Ionic liquids (ILs) are used in a variety of technological and biological applications. Recent experimental and simulation results reveal the influence of aqueous ionic liquids on the stability of protein and enzyme structures. Depending on different parameters like the concentration and the ion composition, one can observe distinct stabilization or denaturation mechanisms for various ILs. In this review, we summarize the main findings and discuss the implications with regard to molecular theories of solutions and specific ion effects. A preferential binding model is introduced in order to discuss protein-IL effects from a statistical mechanics perspective. The value of the preferential binding coefficient determines the strength of the ion influence and indicates a shift of the chemical equilibrium either to the native or the denatured state of the protein. We highlight the role of water in order to explain the self-association behavior of the IL species and discuss recent experimental and simulation results in the light of the observed binding effects.

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Year:  2017        PMID: 28398214     DOI: 10.1088/1361-648X/aa6c9d

Source DB:  PubMed          Journal:  J Phys Condens Matter        ISSN: 0953-8984            Impact factor:   2.333


  13 in total

Review 1.  Ionic liquids as biocompatible stabilizers of proteins.

Authors:  Mouhamad Reslan; Veysel Kayser
Journal:  Biophys Rev       Date:  2018-03-06

Review 2.  Effect of water and ionic liquids on biomolecules.

Authors:  Debasis Saha; Arnab Mukherjee
Journal:  Biophys Rev       Date:  2018-02-08

Review 3.  Aqueous ionic liquids in comparison with standard co-solutes : Differences and common principles in their interaction with protein and DNA structures.

Authors:  Ewa Anna Oprzeska-Zingrebe; Jens Smiatek
Journal:  Biophys Rev       Date:  2018-04-02

4.  Preferential Binding of Urea to Single-Stranded DNA Structures: A Molecular Dynamics Study.

Authors:  Ewa Anna Oprzeska-Zingrebe; Jens Smiatek
Journal:  Biophys J       Date:  2018-04-10       Impact factor: 4.033

5.  Proteins maintain hydration at high [KCl] concentration regardless of content in acidic amino acids.

Authors:  Hosein Geraili Daronkola; Ana Vila Verde
Journal:  Biophys J       Date:  2021-06-02       Impact factor: 3.699

6.  Visualization of DNA Damage and Protection by Atomic Force Microscopy in Liquid.

Authors:  Tinghui Dai; Yanwei Wang; Guangcan Yang
Journal:  Int J Mol Sci       Date:  2022-04-15       Impact factor: 6.208

Review 7.  Computational solvation analysis of biomolecules in aqueous ionic liquid mixtures : From large flexible proteins to small rigid drugs.

Authors:  Veronika Zeindlhofer; Christian Schröder
Journal:  Biophys Rev       Date:  2018-04-23

8.  PDADMAC/PSS Oligoelectrolyte Multilayers: Internal Structure and Hydration Properties at Early Growth Stages from Atomistic Simulations.

Authors:  Pedro A Sánchez; Martin Vögele; Jens Smiatek; Baofu Qiao; Marcello Sega; Christian Holm
Journal:  Molecules       Date:  2020-04-17       Impact factor: 4.411

9.  Sequence-specific destabilization of azurin by tetramethylguanidinium-dipeptide ionic liquids.

Authors:  Roshani Patel; Austin K Clark; Gabriella DeStefano; Isabella DeStefano; Hunter Gogoj; Erin Gray; Aashka Y Patel; Joshua T Hauner; Gregory A Caputo; Timothy D Vaden
Journal:  Biochem Biophys Rep       Date:  2022-03-08

Review 10.  Theoretical and Computational Insight into Solvent and Specific Ion Effects for Polyelectrolytes: The Importance of Local Molecular Interactions.

Authors:  Jens Smiatek
Journal:  Molecules       Date:  2020-04-03       Impact factor: 4.411

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