Literature DB >> 28396554

Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield.

Rafael A Cañas1,2, Zhazira Yesbergenova-Cuny1, Margaret Simons3, Fabien Chardon1, Patrick Armengaud1, Isabelle Quilleré1, Caroline Cukier4, Yves Gibon5, Anis M Limami4, Stéphane Nicolas6, Lenaïg Brulé1, Peter J Lea7, Costas D Maranas3, Bertrand Hirel8.   

Abstract

A combined metabolomic, biochemical, fluxomic, and metabolic modeling approach was developed using 19 genetically distant maize (Zea mays) lines from Europe and America. Considerable differences were detected between the lines when leaf metabolic profiles and activities of the main enzymes involved in primary metabolism were compared. During grain filling, the leaf metabolic composition appeared to be a reliable marker, allowing a classification matching the genetic diversity of the lines. During the same period, there was a significant correlation between the genetic distance of the lines and the activities of enzymes involved in carbon metabolism, notably glycolysis. Although large differences were observed in terms of leaf metabolic fluxes, these variations were not tightly linked to the genome structure of the lines. Both correlation studies and metabolic network analyses allowed the description of a maize ideotype with a high grain yield potential. Such an ideotype is characterized by low accumulation of soluble amino acids and carbohydrates in the leaves and high activity of enzymes involved in the C4 photosynthetic pathway and in the biosynthesis of amino acids derived from glutamate. Chlorogenates appear to be important markers that can be used to select for maize lines that produce larger kernels.
© 2017 American Society of Plant Biologists. All rights reserved.

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Year:  2017        PMID: 28396554      PMCID: PMC5466022          DOI: 10.1105/tpc.16.00613

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  87 in total

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2.  Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize.

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Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-21       Impact factor: 11.205

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Authors:  Weiwei Wen; Kun Li; Saleh Alseekh; Nooshin Omranian; Lijun Zhao; Yang Zhou; Yingjie Xiao; Min Jin; Ning Yang; Haijun Liu; Alexandra Florian; Wenqiang Li; Qingchun Pan; Zoran Nikoloski; Jianbing Yan; Alisdair R Fernie
Journal:  Plant Cell       Date:  2015-07-17       Impact factor: 11.277

5.  The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize.

Authors:  Nardjis Amiour; Sandrine Imbaud; Gilles Clément; Nicolas Agier; Michel Zivy; Benoît Valot; Thierry Balliau; Patrick Armengaud; Isabelle Quilleré; Rafael Cañas; Thérèse Tercet-Laforgue; Bertrand Hirel
Journal:  J Exp Bot       Date:  2012-09       Impact factor: 6.992

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Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

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Journal:  Front Plant Sci       Date:  2016-10-21       Impact factor: 5.753

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2.  Uncovering hidden genetic variation in photosynthesis of field-grown maize under ozone pollution.

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Review 9.  Characterization of effects of genetic variants via genome-scale metabolic modelling.

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Review 10.  The utility of metabolomics as a tool to inform maize biology.

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