Literature DB >> 28394399

A Single-Target Mitochondrial RNA Editing Factor of Funaria hygrometrica Can Fully Reconstitute RNA Editing at Two Sites in Physcomitrella patens.

Mareike Schallenberg-Rüdinger1,2, Bastian Oldenkott2, Manuel Hiss1, Phuong Le Trinh2,3, Volker Knoop2, Stefan A Rensing1,4.   

Abstract

Nuclear-encoded pentatricopeptide repeat (PPR) proteins are key factors for site-specific RNA editing, converting cytidines into uridines in plant mitochondria and chloroplasts. All editing factors in the model moss Physcomitrella patens have a C-terminal DYW domain with similarity to cytidine deaminase. However, numerous editing factors in flowering plants lack such a terminal DYW domain, questioning its immediate role in the pyrimidine base conversion process. Here we further investigate the Physcomitrella DYW-type PPR protein PPR_78, responsible for mitochondrial editing sites cox1eU755SL and rps14eU137SL. Complementation assays with truncated proteins demonstrate that the DYW domain is essential for full PPR_78 editing functionality. The DYW domain can be replaced, however, with its counterpart from another editing factor, PPR_79. The PPR_78 ortholog of the related moss Funaria hygrometrica fully complements the Physcomitrella mutant for editing at both sites, although the editing site in rps14 is lacking in Funaria. Editing factor orthologs in different taxa may thus retain editing capacity for multiple sites despite the absence of editing requirement.
© The Author 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  DYW cytidine deaminase; Evolution; Funaria hygrometrica; Pentatricopeptide repeat proteins; Physcomitrella patens; RNA editing

Mesh:

Substances:

Year:  2017        PMID: 28394399     DOI: 10.1093/pcp/pcw229

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  4 in total

1.  One C-to-U RNA Editing Site and Two Independently Evolved Editing Factors: Testing Reciprocal Complementation with DYW-Type PPR Proteins from the Moss Physcomitrium (Physcomitrella) patens and the Flowering Plants Macadamia integrifolia and Arabidopsis.

Authors:  Bastian Oldenkott; Matthias Burger; Anke-Christiane Hein; Anja Jörg; Jennifer Senkler; Hans-Peter Braun; Volker Knoop; Mizuki Takenaka; Mareike Schallenberg-Rüdinger
Journal:  Plant Cell       Date:  2020-07-02       Impact factor: 11.277

2.  Plant organelle RNA editing and its specificity factors: enhancements of analyses and new database features in PREPACT 3.0.

Authors:  Henning Lenz; Anke Hein; Volker Knoop
Journal:  BMC Bioinformatics       Date:  2018-07-03       Impact factor: 3.169

3.  PPR647 Protein Is Required for Chloroplast RNA Editing, Splicing and Chloroplast Development in Maize.

Authors:  Yan Zhao; Wei Xu; Yongzhong Zhang; Shilei Sun; Lijing Wang; Shiyi Zhong; Xiangyu Zhao; Baoshen Liu
Journal:  Int J Mol Sci       Date:  2021-10-16       Impact factor: 5.923

4.  Combination of the Endogenous lhcsr1 Promoter and Codon Usage Optimization Boosts Protein Expression in the Moss Physcomitrella patens.

Authors:  Manuel Hiss; Lucas Schneider; Christopher Grosche; Melanie A Barth; Christina Neu; Aikaterini Symeonidi; Kristian K Ullrich; Pierre-François Perroud; Mareike Schallenberg-Rüdinger; Stefan A Rensing
Journal:  Front Plant Sci       Date:  2017-10-31       Impact factor: 5.753

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.