Literature DB >> 28393153

Improving Renal Cell Carcinoma Classification by Automatic Region of Interest Selection.

Qaiser Chaudry1, S Hussain Raza2, Yachna Sharma3, Andrew N Young4, May D Wang5.   

Abstract

In this paper, we present an improved automated system for classification of pathological image data of renal cell carcinoma. The task of analyzing tissue biopsies, generally performed manually by expert pathologists, is extremely challenging due to the variability in the tissue morphology, the preparation of tissue specimen, and the image acquisition process. Due to the complexity of this task and heterogeneity of patient tissue, this process suffers from inter-observer and intra-observer variability. In continuation of our previous work, which proposed a knowledge-based automated system, we observe that real life clinical biopsy images which contain necrotic regions and glands significantly degrade the classification process. Following the pathologist's technique of focusing on selected region of interest (ROI), we propose a simple ROI selection process which automatically rejects the glands and necrotic regions thereby improving the classification accuracy. We were able to improve the classification accuracy from 90% to 95% on a significantly heterogeneous image data set using our technique.

Entities:  

Year:  2008        PMID: 28393153      PMCID: PMC5382997          DOI: 10.1109/BIBE.2008.4696796

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Bioinformatics Bioeng        ISSN: 2159-5410


  9 in total

1.  The use of morphological characteristics and texture analysis in the identification of tissue composition in prostatic neoplasia.

Authors:  James Diamond; Neil H Anderson; Peter H Bartels; Rodolfo Montironi; Peter W Hamilton
Journal:  Hum Pathol       Date:  2004-09       Impact factor: 3.466

2.  Improving breast cancer diagnosis with computer-aided diagnosis.

Authors:  Y Jiang; R M Nishikawa; R A Schmidt; C E Metz; M L Giger; K Doi
Journal:  Acad Radiol       Date:  1999-01       Impact factor: 3.173

3.  Evidence-based pathology.

Authors:  K A Fleming
Journal:  J Pathol       Date:  1996-06       Impact factor: 7.996

4.  Discordance among expert pathologists in diagnosis of melanocytic neoplasms.

Authors:  A B Ackerman
Journal:  Hum Pathol       Date:  1996-11       Impact factor: 3.466

5.  Morphological feature extraction for the classification of digital images of cancerous tissues.

Authors:  J P Thiran; B Macq
Journal:  IEEE Trans Biomed Eng       Date:  1996-10       Impact factor: 4.538

6.  Automated Renal Cell Carcinoma Subtype Classification Using Morphological, Textural and Wavelets Based Features.

Authors:  Qaiser Chaudry; Syed Hussain Raza; Andrew N Young; May D Wang
Journal:  J Signal Process Syst       Date:  2008-06-21

7.  Microscopic image analysis for quantitative measurement and feature identification of normal and cancerous colonic mucosa.

Authors:  A N Esgiar; R N Naguib; B S Sharif; M K Bennett; A Murray
Journal:  IEEE Trans Inf Technol Biomed       Date:  1998-09

8.  Fractal analysis in the detection of colonic cancer images.

Authors:  Abdelrahim Nasser Esgiar; Raouf N G Naguib; Bayan S Sharif; Mark K Bennett; Alan Murray
Journal:  IEEE Trans Inf Technol Biomed       Date:  2002-03

Review 9.  Discordance in the histopathologic diagnosis of melanoma and melanocytic nevi between expert pathologists.

Authors:  E R Farmer; R Gonin; M P Hanna
Journal:  Hum Pathol       Date:  1996-06       Impact factor: 3.466

  9 in total
  2 in total

1.  Automated classification of renal cell carcinoma subtypes using bag-of-features.

Authors:  Hussain S Raza; Mitchell R Parry; Yachna Sharma; Qaiser Chaudry; Richard A Moffitt; A N Young; May D Wang
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2010

2.  AUTOMATED CELL COUNTING AND CLUSTER SEGMENTATION USING CONCAVITY DETECTION AND ELLIPSE FITTING TECHNIQUES.

Authors:  Sonal Kothari; Qaiser Chaudry; May D Wang
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2009-08-07
  2 in total

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