Literature DB >> 21095831

Automated classification of renal cell carcinoma subtypes using bag-of-features.

Hussain S Raza1, Mitchell R Parry, Yachna Sharma, Qaiser Chaudry, Richard A Moffitt, A N Young, May D Wang.   

Abstract

Color variation in medical images degrades the classification performance of computer aided diagnosis systems. Traditionally, color segmentation algorithms mitigate this variability and improve performance. However, consistent and robust segmentation remains an open research problem. In this study, we avoid the tenuous phase of color segmentation by adapting a bag-of-features approach using scale invariant features for classification of renal cell carcinoma subtypes. Previous work shows that features from each subtype match those from expertly chosen template images. In this paper, we show that the performance of this match-based methodology greatly depends on the quality of the template images. To avoid this uncertainty, we propose a bag-of-features approach that does not require expert knowledge and instead learns a "vocabulary" of morphological characteristics from training data. We build a support vector machine using feature histograms and evaluate this method using 40 iterations of 3-fold cross validation. We achieve classification accuracy above 90% for a heterogeneous dataset labeled by an expert pathologist, showing its potential for future clinical applications.

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Year:  2010        PMID: 21095831      PMCID: PMC4983441          DOI: 10.1109/IEMBS.2010.5626009

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  6 in total

1.  The use of morphological characteristics and texture analysis in the identification of tissue composition in prostatic neoplasia.

Authors:  James Diamond; Neil H Anderson; Peter H Bartels; Rodolfo Montironi; Peter W Hamilton
Journal:  Hum Pathol       Date:  2004-09       Impact factor: 3.466

2.  Automated Renal Cell Carcinoma Subtype Classification Using Morphological, Textural and Wavelets Based Features.

Authors:  Qaiser Chaudry; Syed Hussain Raza; Andrew N Young; May D Wang
Journal:  J Signal Process Syst       Date:  2008-06-21

3.  Microscopic image analysis for quantitative measurement and feature identification of normal and cancerous colonic mucosa.

Authors:  A N Esgiar; R N Naguib; B S Sharif; M K Bennett; A Murray
Journal:  IEEE Trans Inf Technol Biomed       Date:  1998-09

4.  Fractal analysis in the detection of colonic cancer images.

Authors:  Abdelrahim Nasser Esgiar; Raouf N G Naguib; Bayan S Sharif; Mark K Bennett; Alan Murray
Journal:  IEEE Trans Inf Technol Biomed       Date:  2002-03

5.  Improving Renal Cell Carcinoma Classification by Automatic Region of Interest Selection.

Authors:  Qaiser Chaudry; S Hussain Raza; Yachna Sharma; Andrew N Young; May D Wang
Journal:  Proc IEEE Int Symp Bioinformatics Bioeng       Date:  2008-12-08

6.  Automated classification of renal cell carcinoma subtypes using scale invariant feature transform.

Authors:  S Raza; Yachna Sharma; Qaiser Chaudry; Andrew N Young; May D Wang
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009
  6 in total
  2 in total

1.  An analysis of scale and rotation invariance in the bag-of-features method for histopathological image classification.

Authors:  S Hussain Raza; R Mitchell Parry; Richard A Moffitt; Andrew N Young; May D Wang
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  Image classification of human carcinoma cells using complex wavelet-based covariance descriptors.

Authors:  Furkan Keskin; Alexander Suhre; Kivanc Kose; Tulin Ersahin; A Enis Cetin; Rengul Cetin-Atalay
Journal:  PLoS One       Date:  2013-01-16       Impact factor: 3.240

  2 in total

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