| Literature DB >> 28388918 |
Karori S Mbuthia1, Paul O Mireji2, Raphael M Ngure3, Francesca Stomeo4, Martina Kyallo4, Chalo Muoki5, Francis N Wachira6.
Abstract
BACKGROUND: Tea (Camellia sinensis) infusions are widely consumed beverages with numerous health benefits. However, physiological and molecular responses mediating these activities are poorly understood.Entities:
Keywords: Anthocyanins; Antioxidant activity; Caspases; Catechins; Egcg; Theaflavins
Mesh:
Substances:
Year: 2017 PMID: 28388918 PMCID: PMC5383982 DOI: 10.1186/s12906-017-1683-6
Source DB: PubMed Journal: BMC Complement Altern Med ISSN: 1472-6882 Impact factor: 3.659
Fig. 1Quantification of the inhibitory concentration (IC50 μg/ml) of purple, black and green teas on 4TIcancer cells
Cytotoxicity of various tea extract
| Tea samples | |||
|---|---|---|---|
| Green tea | Black tea | Purple tea | |
| IC50 (μg/ml) | 12.55 | 50.66 | 32.96 |
| 14.25 | 38.49 | 28.13 | |
| 12.56 | 42.96 | 26.73 | |
| Mean (μg/ml) | 13.12 | 44.04 | 29.27 |
| Toxicity level | Mild | Non toxic | Mild |
| n | 3 | 3 | 3 |
| CV | 7.46% | 13.98% | 11.17% |
Fig. 2A monolayer of 4TI control cells after 48 h in DMEM media
Fig. 3Sensitivity of 4TI cancer cells to black tea at IC50 of 44.04 μg/ml showing disruption of monolayer
Fig. 4Sensitivity of 4TI cancer cells to purple tea at IC50 of 29.27 μg/ml showing disruption of monolayer
Fig. 5Sensitivity of 4TI cancer cells to green tea at IC50 of 13.12 μg/ml showing disruption of monolayer
The concentration and quality of mRNA as determined based on absorbance at 260 nm and 280 nm using a Nanodrop spectrophotometer
| # | Sample ID | Nucleic acid conc. (ng/μl) | Unit | A260 | A280 | 260/280 | MIDa |
|---|---|---|---|---|---|---|---|
| 1 | GT-B | 234.3 | ng/μl | 7.101 | 3.406 | 2.08 | 13 |
| 2 | CC-B | 279.1 | ng/μl | 8.457 | 4.119 | 2.05 | 14 |
| 3 | D-B | 36.5 | ng/μl | 1.107 | 0.598 | 1.85 | 15 |
| 4 | PT-C | 94.9 | ng/μl | 2.876 | 1.513 | 1.9 | 16 |
| 5 | GT-D | 130.3 | ng/μl | 3.948 | 2.11 | 1.87 | 17 |
| 6 | BT-C | 66.2 | ng/μl | 2.008 | 1.022 | 1.96 | 18 |
| 7 | BT-D | 88.1 | ng/μl | 2.67 | 1.412 | 1.89 | 19 |
| 8 | PT-A | 181.7 | ng/μl | 5.507 | 2.749 | 2 | 20 |
| 9 | PT-D | 80.3 | ng/μl | 2.432 | 1.192 | 2.04 | 21 |
| 10 | GT-A | 38.7 | ng/μl | 1.172 | 0.579 | 2.02 | 22 |
| 11 | CC-C | 12.6 | ng/μl | 0.382 | 0.189 | 1.76 | 23 |
aMultiplex Identifier (MID) stands for multiplex identifier which is a 10 nucleotide identifier sequence for differentiation of multiplex sequence data sets
Fig. 6Gel electrophoresis image of mRNA from cells treated with the representative tea samples
Fig. 7Representative images indicating the size distribution and quality of cDNA library assessed on an Agilent bioanalyzerhigh sensitivity DNA chip. The cDNA produced a peak between 600 and 1200 bp as shown by the arrow
Fig. 8Gel-like image of the cDNA library samples as run on an Agilent bioanalyzer high sensitivity DNA chip. The samples produced a smear that ranged from 0.2 kb to 7 kb as shown in the arrow
Fig. 9Box plot showing quality scores of trimmed sequences
Transcriptome analysis of genes affected by green, black and purples teas
| Gene ID | Green tea | Black tea | Purple tea |
|---|---|---|---|
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Legend; R; Stands for RPKM which are the reads per kilobase per million is a method of normalization that is wizdely used in RNA-seq analysis
F; Stands for a fold change which is an algorithm used to produce biologically meaningful rankings of differentially expressed genes from RNA-seq data
P; This is a probability of obtaining the observed effect under a hypothesis (null). P value of less than 0.05 (p ≤ 0.05) are considered statistically significant