Literature DB >> 28380352

Cellular Decision Making by Non-Integrative Processing of TLR Inputs.

Ryan A Kellogg1, Chengzhe Tian2, Martin Etzrodt3, Savaş Tay4.   

Abstract

Cells receive a multitude of signals from the environment, but how they process simultaneous signaling inputs is not well understood. Response to infection, for example, involves parallel activation of multiple Toll-like receptors (TLRs) that converge on the nuclear factor κB (NF-κB) pathway. Although we increasingly understand inflammatory responses for isolated signals, it is not clear how cells process multiple signals that co-occur in physiological settings. We therefore examined a bacterial infection scenario involving co-stimulation of TLR4 and TLR2. Independent stimulation of these receptors induced distinct NF-κB dynamic profiles, although surprisingly, under co-stimulation, single cells continued to show ligand-specific dynamic responses characteristic of TLR2 or TLR4 signaling rather than a mixed response, comprising a cellular decision that we term "non-integrative" processing. Iterating modeling and microfluidic experiments revealed that non-integrative processing occurred through interaction of switch-like NF-κB activation, receptor-specific processing timescales, cell-to-cell variability, and TLR cross-tolerance mediated by multilayer negative feedback.
Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  digital; dynamics; immunity; information processing; live-cell imaging; microfluidics; signaling; single cell; synergy; toll-like receptors

Mesh:

Substances:

Year:  2017        PMID: 28380352      PMCID: PMC5766323          DOI: 10.1016/j.celrep.2017.03.027

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  44 in total

1.  The dynamics of signaling as a pharmacological target.

Authors:  Marcelo Behar; Derren Barken; Shannon L Werner; Alexander Hoffmann
Journal:  Cell       Date:  2013-10-10       Impact factor: 41.582

2.  Single-cell imaging of caspase-1 dynamics reveals an all-or-none inflammasome signaling response.

Authors:  Ting Liu; Yoshifumi Yamaguchi; Yoshitaka Shirasaki; Koichi Shikada; Mai Yamagishi; Katsuaki Hoshino; Tsuneyasu Kaisho; Kiwamu Takemoto; Toshihiko Suzuki; Erina Kuranaga; Osamu Ohara; Masayuki Miura
Journal:  Cell Rep       Date:  2014-08-07       Impact factor: 9.423

3.  NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses.

Authors:  Konstantin D Taganov; Mark P Boldin; Kuang-Jung Chang; David Baltimore
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-02       Impact factor: 11.205

4.  TRAM is required for TLR2 endosomal signaling to type I IFN induction.

Authors:  Julianne Stack; Sarah L Doyle; Dympna J Connolly; Line S Reinert; Kate M O'Keeffe; Rachel M McLoughlin; Søren R Paludan; Andrew G Bowie
Journal:  J Immunol       Date:  2014-11-10       Impact factor: 5.422

5.  Stimulus specificity of gene expression programs determined by temporal control of IKK activity.

Authors:  Shannon L Werner; Derren Barken; Alexander Hoffmann
Journal:  Science       Date:  2005-09-16       Impact factor: 47.728

6.  Cutting edge: TCR ligation triggers digital activation of NF-kappaB.

Authors:  Lara M Kingeter; Suman Paul; Sean K Maynard; Natalia G Cartwright; Brian C Schaefer
Journal:  J Immunol       Date:  2010-09-20       Impact factor: 5.422

7.  Synergy between TLR2 and TLR4: a safety mechanism.

Authors:  E Beutler; T Gelbart; C West
Journal:  Blood Cells Mol Dis       Date:  2001 Jul-Aug       Impact factor: 3.039

Review 8.  Functional roles for noise in genetic circuits.

Authors:  Avigdor Eldar; Michael B Elowitz
Journal:  Nature       Date:  2010-09-09       Impact factor: 49.962

9.  Selective synergy in anti-inflammatory cytokine production upon cooperated signaling via TLR4 and TLR2 in murine conventional dendritic cells.

Authors:  Noriyuki Hirata; Yoshiki Yanagawa; Takashi Ebihara; Tsukasa Seya; Satoshi Uematsu; Shizuo Akira; Fumie Hayashi; Kazuya Iwabuchi; Kazunori Onoé
Journal:  Mol Immunol       Date:  2008-03-26       Impact factor: 4.407

10.  Robust network topologies for generating switch-like cellular responses.

Authors:  Najaf A Shah; Casim A Sarkar
Journal:  PLoS Comput Biol       Date:  2011-06-23       Impact factor: 4.475

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  20 in total

1.  Role of Militarine in PM2.5-Induced BV-2 Cell Damage.

Authors:  Shu-Xin Tian; Wen Cheng; Jing-Jing Lu; Fang-Mei Zhou; Zhi-Shan Ding; Bing-Qi Zhu
Journal:  Neurochem Res       Date:  2021-03-06       Impact factor: 3.996

Review 2.  Insights on the NF-κB System Using Live Cell Imaging: Recent Developments and Future Perspectives.

Authors:  Cise Kizilirmak; Marco E Bianchi; Samuel Zambrano
Journal:  Front Immunol       Date:  2022-06-29       Impact factor: 8.786

3.  Integrative analysis suggests cell type-specific decoding of NF-κB dynamics.

Authors:  Erik W Martin; Alicja Pacholewska; Heta Patel; Himanshu Dashora; Myong-Hee Sung
Journal:  Sci Signal       Date:  2020-02-25       Impact factor: 8.192

Review 4.  Dynamism of an Astrocyte In Vivo: Perspectives on Identity and Function.

Authors:  Kira E Poskanzer; Anna V Molofsky
Journal:  Annu Rev Physiol       Date:  2017-11-20       Impact factor: 19.318

5.  Receptor-Ligand Kinetics Influence the Mechanism of Action of Covalently Linked TLR Ligands.

Authors:  Flora W Kimani; Jainu Ajit; Alexander Galluppi; Saikat Manna; William J Howitz; Sophia Tang; Aaron P Esser-Kahn
Journal:  ACS Chem Biol       Date:  2021-02-01       Impact factor: 5.100

6.  Evaluation of neurological changes in secondary progressive multiple sclerosis patients treated with immune modulator MIS416: results from a feasibility study.

Authors:  Gill A Webster; Dalice A Sim; Anne C La Flamme; Nancy E Mayo
Journal:  Pilot Feasibility Stud       Date:  2017-11-16

7.  Transcriptional outcomes and kinetic patterning of gene expression in response to NF-κB activation.

Authors:  Mingming Zhao; Jaimy Joy; Weiqiang Zhou; Supriyo De; William H Wood; Kevin G Becker; Hongkai Ji; Ranjan Sen
Journal:  PLoS Biol       Date:  2018-09-10       Impact factor: 8.029

Review 8.  Signal Distortion: How Intracellular Pathogens Alter Host Cell Fate by Modulating NF-κB Dynamics.

Authors:  Rachel H Nelson; David E Nelson
Journal:  Front Immunol       Date:  2018-12-14       Impact factor: 7.561

Review 9.  NF-κB Signaling in Macrophages: Dynamics, Crosstalk, and Signal Integration.

Authors:  Michael G Dorrington; Iain D C Fraser
Journal:  Front Immunol       Date:  2019-04-09       Impact factor: 7.561

10.  Combinatorial processing of bacterial and host-derived innate immune stimuli at the single-cell level.

Authors:  Miriam V Gutschow; John C Mason; Keara M Lane; Inbal Maayan; Jacob J Hughey; Bryce T Bajar; Debha N Amatya; Sean D Valle; Markus W Covert
Journal:  Mol Biol Cell       Date:  2018-11-21       Impact factor: 4.138

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