Literature DB >> 28373264

Association of circulating transcriptomic profiles with mortality in sickle cell disease.

Ankit A Desai1, Zhengdeng Lei2, Neil Bahroos2, Mark Maienschein-Cline2, Santosh L Saraf3, Xu Zhang3, Binal N Shah3, Seyed M Nouraie4, Taimur Abbasi3, Amit R Patel5, Roberto M Lang5, Yves Lussier1, Joe G N Garcia1, Victor R Gordeuk3, Roberto F Machado3.   

Abstract

Sickle cell disease (SCD) complications are associated with increased morbidity and risk of mortality. We sought to identify a circulating transcriptomic profile predictive of these poor outcomes in SCD. Training and testing cohorts consisting of adult patients with SCD were recruited and prospectively followed. A pathway-based signature derived from grouping peripheral blood mononuclear cell transcriptomes distinguished 2 patient clusters with differences in survival in the training cohort. These findings were validated in a testing cohort in which the association between cluster 1 molecular profiling and mortality remained significant in a fully adjusted model. In a third cohort of West African children with SCD, cluster 1 differentiated SCD severity using a published scoring index. Finally, a risk score composed of assigning weights to cluster 1 profiling, along with established clinical risk factors using tricuspid regurgitation velocity, white blood cell count, history of acute chest syndrome, and hemoglobin levels, demonstrated a higher hazard ratio for mortality in both the training and testing cohorts compared with clinical risk factors or cluster 1 data alone. Circulating transcriptomic profiles are a powerful method to risk-stratify severity of disease and poor outcomes in both children and adults, respectively, with SCD and highlight potential associated molecular pathways.
© 2017 by The American Society of Hematology.

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Year:  2017        PMID: 28373264      PMCID: PMC5454338          DOI: 10.1182/blood-2016-11-752279

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  41 in total

Review 1.  Sickle-cell disease and the heart: review of the current literature.

Authors:  Ersi Voskaridou; Dimitrios Christoulas; Evangelos Terpos
Journal:  Br J Haematol       Date:  2012-04-25       Impact factor: 6.998

Review 2.  Molecular link between intravascular hemolysis and vascular occlusion in sickle cell disease.

Authors:  Zhou Zhou; Donald L Yee; Prasenjit Guchhait
Journal:  Curr Vasc Pharmacol       Date:  2012-11       Impact factor: 2.719

3.  Gene expression profiles and B-type natriuretic peptide elevation in heart transplantation: more than a hemodynamic marker.

Authors:  Mandeep R Mehra; Patricia A Uber; Dirk Walther; Mark Vesely; Jay G Wohlgemuth; James Prentice; Darren Tayama; Margaret Billingham
Journal:  Circulation       Date:  2006-07-04       Impact factor: 29.690

4.  The Role of Inflammation and Leukocytes in the Pathogenesis of Sickle Cell Disease; Haemoglobinopathy.

Authors:  Ted Wun
Journal:  Hematology       Date:  2001       Impact factor: 2.269

5.  A novel molecular signature for elevated tricuspid regurgitation velocity in sickle cell disease.

Authors:  Ankit A Desai; Tong Zhou; Homaa Ahmad; Wei Zhang; Wenbo Mu; Sharon Trevino; Michael S Wade; Nalini Raghavachari; Gregory J Kato; Marlene H Peters-Lawrence; Tejas Thiruvoipati; Kristin Turner; Nicole Artz; Yong Huang; Amit R Patel; Jason X-J Yuan; Victor R Gordeuk; Roberto M Lang; Joe G N Garcia; Roberto F Machado
Journal:  Am J Respir Crit Care Med       Date:  2012-06-07       Impact factor: 21.405

Review 6.  The intriguing contribution of white blood cells to sickle cell disease - a red cell disorder.

Authors:  Iheanyi Okpala
Journal:  Blood Rev       Date:  2004-03       Impact factor: 8.250

7.  A network model to predict the risk of death in sickle cell disease.

Authors:  Paola Sebastiani; Vikki G Nolan; Clinton T Baldwin; Maria M Abad-Grau; Ling Wang; Adeboye H Adewoye; Lillian C McMahon; Lindsay A Farrer; James G Taylor; Gregory J Kato; Mark T Gladwin; Martin H Steinberg
Journal:  Blood       Date:  2007-06-28       Impact factor: 22.113

8.  Erythroid-specific transcriptional changes in PBMCs from pulmonary hypertension patients.

Authors:  Chris Cheadle; Alan E Berger; Stephen C Mathai; Dmitry N Grigoryev; Tonya N Watkins; Yumiko Sugawara; Sangjucta Barkataki; Jinshui Fan; Meher Boorgula; Laura Hummers; Ari L Zaiman; Reda Girgis; Michael A McDevitt; Roger A Johns; Frederick Wigley; Kathleen C Barnes; Paul M Hassoun
Journal:  PLoS One       Date:  2012-04-24       Impact factor: 3.240

9.  Associations of Prolonged QTc in Sickle Cell Disease.

Authors:  Julia H Indik; Vineet Nair; Ruslan Rafikov; Iwan S Nyotowidjojo; Jaskanwal Bisla; Mayank Kansal; Devang S Parikh; Melissa Robinson; Anand Desai; Megha Oberoi; Akash Gupta; Taimur Abbasi; Zain Khalpey; Amit R Patel; Roberto M Lang; Samuel C Dudley; Bum-Rak Choi; Joe G N Garcia; Roberto F Machado; Ankit A Desai
Journal:  PLoS One       Date:  2016-10-13       Impact factor: 3.240

10.  Role of innate immunity-triggered pathways in the pathogenesis of Sickle Cell Disease: a meta-analysis of gene expression studies.

Authors:  Bidossessi Wilfried Hounkpe; Maiara Marx Luz Fiusa; Marina Pereira Colella; Loredana Nilkenes Gomes da Costa; Rafaela de Oliveira Benatti; Sara T Olalla Saad; Fernando Ferreira Costa; Magnun Nueldo Nunes dos Santos; Erich Vinicius De Paula
Journal:  Sci Rep       Date:  2015-12-09       Impact factor: 4.379

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  12 in total

Review 1.  Measuring success: utility of biomarkers in sickle cell disease clinical trials and care.

Authors:  Ram Kalpatthi; Enrico M Novelli
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2018-11-30

2.  Sickle cell disease in the era of precision medicine: looking to the future.

Authors:  Martin H Steinberg; Sara Kumar; George J Murphy; Kim Vanuytsel
Journal:  Expert Rev Precis Med Drug Dev       Date:  2019-11-07

3.  A cortactin CTTN coding SNP contributes to lung vascular permeability and inflammatory disease severity in African descent subjects.

Authors:  Patrick Belvitch; Nancy Casanova; Xiaoguang Sun; Sara M Camp; Saad Sammani; Mary E Brown; Joseph Mascarhenas; Heather Lynn; Djanybek Adyshev; Jessica Siegler; Ankit Desai; Laleh Seyed-Saadat; Alicia Rizzo; Christian Bime; Gajendra S Shekhawat; Vinayak P Dravid; John P Reilly; Tiffanie K Jones; Rui Feng; Eleftheria Letsiou; Nuala J Meyer; Nathan Ellis; Joe G N Garcia; Steven M Dudek
Journal:  Transl Res       Date:  2022-02-15       Impact factor: 10.171

4.  Biomarker signatures of sickle cell disease severity.

Authors:  Mengtian Du; Sarah Van Ness; Victor Gordeuk; Sayed M Nouraie; Sergei Nekhai; Mark Gladwin; Martin H Steinberg; Paola Sebastiani
Journal:  Blood Cells Mol Dis       Date:  2018-05-16       Impact factor: 3.039

5.  Peripheral blood mononuclear cells show prominent gene expression by erythroid progenitors in diseases characterized by heightened erythropoiesis.

Authors:  Xu Zhang; Jihyun Song; Binal N Shah; Sergei Nekhai; Galina Miasnikova; Adelina Sergueeva; Josef T Prchal; Victor R Gordeuk
Journal:  Br J Haematol       Date:  2020-05-12       Impact factor: 6.998

6.  IL-18 mediates sickle cell cardiomyopathy and ventricular arrhythmias.

Authors:  Akash Gupta; Yu-Dong Fei; Tae Yun Kim; An Xie; Ken Batai; Ian Greener; Haiyang Tang; Sultan Ciftci-Yilmaz; Elizabeth Juneman; Julia H Indik; Guanbin Shi; Jared Christensen; Geetanjali Gupta; Cheryl Hillery; Mayank M Kansal; Devang S Parikh; Tong Zhou; Jason X-J Yuan; Yogendra Kanthi; Peter Bronk; Gideon Koren; Rick Kittles; Julio D Duarte; Joe G N Garcia; Roberto F Machado; Samuel C Dudley; Bum-Rak Choi; Ankit A Desai
Journal:  Blood       Date:  2021-03-04       Impact factor: 25.476

7.  A common molecular signature of patients with sickle cell disease revealed by microarray meta-analysis and a genome-wide association study.

Authors:  Cherif Ben Hamda; Raphael Sangeda; Liberata Mwita; Ayton Meintjes; Siana Nkya; Sumir Panji; Nicola Mulder; Lamia Guizani-Tabbane; Alia Benkahla; Julie Makani; Kais Ghedira
Journal:  PLoS One       Date:  2018-07-06       Impact factor: 3.240

8.  Baseline and Disease-Induced Transcriptional Profiles in Children with Sickle Cell Disease.

Authors:  Susan Creary; Chandra L Shrestha; Kavitha Kotha; Abena Minta; James Fitch; Lisa Jaramillo; Shuzhong Zhang; Swaroop Pinto; Rohan Thompson; Octavio Ramilo; Peter White; Asuncion Mejias; Benjamin T Kopp
Journal:  Sci Rep       Date:  2020-06-02       Impact factor: 4.379

Review 9.  Allogeneic Hematopoietic Stem Cell Transplantation for Adults with Sickle Cell Disease.

Authors:  Santosh L Saraf; Damiano Rondelli
Journal:  J Clin Med       Date:  2019-10-01       Impact factor: 4.241

10.  Genetic modifiers of long-term survival in sickle cell anemia.

Authors:  Ambroise Wonkam; Emile R Chimusa; Khuthala Mnika; Gift Dineo Pule; Valentina Josiane Ngo Bitoungui; Nicola Mulder; Daniel Shriner; Charles N Rotimi; Adebowale Adeyemo
Journal:  Clin Transl Med       Date:  2020-08
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