Literature DB >> 28355541

A Combined NMR and SAXS Analysis of the Partially Folded Cataract-Associated V75D γD-Crystallin.

Matthew J Whitley1, Zhaoyong Xi1, Jonathan C Bartko1, Malene Ringkjøbing Jensen2, Martin Blackledge2, Angela M Gronenborn3.   

Abstract

A cataract is a pathological condition characterized by the clouding of the normally clear eye lens brought about by deposition of crystallin proteins in the lens fiber cells. These protein aggregates reduce visual acuity by scattering or blocking incoming light. Chemical damage to proteins of the crystallin family, accumulated over a lifetime, leads to age-related cataract, whereas inherited mutations are associated with congenital or early-onset cataract. The V75D mutant of γD-crystallin is associated with congenital cataract in mice and was previously shown to un/fold via a partially folded intermediate. Here, we structurally characterized the stable equilibrium urea unfolding intermediate of V75D at the ensemble level using solution NMR and small-angle x-ray scattering. Our data show that, in the intermediate, the C-terminal domain retains a folded conformation that is similar to the native wild-type protein, whereas the N-terminal domain is unfolded and comprises an ensemble of random conformers, without any detectable residual structural propensities.
Copyright © 2017 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28355541      PMCID: PMC5376099          DOI: 10.1016/j.bpj.2017.02.010

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  71 in total

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3.  Quantitative measurement of young human eye lens crystallins by direct injection Fourier transform ion cyclotron resonance mass spectrometry.

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4.  Structural and biochemical characterization of the childhood cataract-associated R76S mutant of human γD-crystallin.

Authors:  Fangling Ji; Jinwon Jung; Angela M Gronenborn
Journal:  Biochemistry       Date:  2012-03-14       Impact factor: 3.162

5.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

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Authors:  D Eliezer; J Chung; H J Dyson; P E Wright
Journal:  Biochemistry       Date:  2000-03-21       Impact factor: 3.162

7.  Decrease in protein solubility and cataract formation caused by the Pro23 to Thr mutation in human gamma D-crystallin.

Authors:  Ajay Pande; Onofrio Annunziata; Neer Asherie; Olutayo Ogun; George B Benedek; Jayanti Pande
Journal:  Biochemistry       Date:  2005-02-22       Impact factor: 3.162

8.  Poisson-gap sampling and forward maximum entropy reconstruction for enhancing the resolution and sensitivity of protein NMR data.

Authors:  Sven G Hyberts; Koh Takeuchi; Gerhard Wagner
Journal:  J Am Chem Soc       Date:  2010-02-24       Impact factor: 15.419

9.  Features and development of Coot.

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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 10.  On the mechanism of organelle degradation in the vertebrate lens.

Authors:  Steven Bassnett
Journal:  Exp Eye Res       Date:  2008-09-18       Impact factor: 3.467

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  8 in total

1.  Assessing the Structures and Interactions of γD-Crystallin Deamidation Variants.

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Journal:  Structure       Date:  2020-12-01       Impact factor: 5.006

Review 2.  Function and Aggregation in Structural Eye Lens Crystallins.

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Review 3.  The Proteome Folding Problem and Cellular Proteostasis.

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4.  A Single-Molecule Strategy to Capture Non-native Intramolecular and Intermolecular Protein Disulfide Bridges.

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5.  Human γS-Crystallin-Copper Binding Helps Buffer against Aggregation Caused by Oxidative Damage.

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Journal:  Biochemistry       Date:  2020-06-12       Impact factor: 3.162

Review 6.  Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology.

Authors:  Chris A Brosey; John A Tainer
Journal:  Curr Opin Struct Biol       Date:  2019-06-13       Impact factor: 6.809

7.  Quantitative Description of Intrinsically Disordered Proteins Using Single-Molecule FRET, NMR, and SAXS.

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Review 8.  Chemical Properties Determine Solubility and Stability in βγ-Crystallins of the Eye Lens.

Authors:  Megan A Rocha; Marc A Sprague-Piercy; Ashley O Kwok; Kyle W Roskamp; Rachel W Martin
Journal:  Chembiochem       Date:  2021-02-10       Impact factor: 3.164

  8 in total

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