Literature DB >> 2835088

Analysis of proton release in oxygen binding by hemoglobin: implications for the cooperative mechanism.

A W Lee1, M Karplus, C Poyart, E Bursaux.   

Abstract

The relationship in hemoglobin between cooperativity (dependence of the Hill constant on pH0 and the Bohr effect (dependence of the mean oxygen affinity on pH) can be described by a statistical thermodynamic model [Szabo, A., & Karplus, M. (1972) J. Mol. Biol. 72, 163-197; Lee, A., & Karplus, M. (1983) Proc. Natl. Acad. Sci. U.S.A. 80, 7055-759]. In this model, salt bridges and other interactions serve to couple tertiary and quaternary structural changes. To test and refine the model, it is applied to the analysis of the pH dependence of the tetramer Adair constants corrected for statistical factors (K4i', i = 1-4). Attention is focused on the proton release of the first (delta H1+ = alpha log K41'/alpha pH) and last (delta H4+ = alpha log K44'/alpha pH) oxygenation steps, where K4i' are the Adair constants corrected for statistical factors. Measurements of delta H1+ and delta H4+ under carefully controlled conditions are reported, and good agreement between the model calculation and these experimental results is obtained. The salt bridges are found to be partially coupled to the ligation state in the deoxy quaternary structure; it is shown that a Monod-Wyman-Changeux-type model, in which the salt bridges are coupled only to quaternary structural change, is inconsistent with the data for delta H1. The significance of the present analysis for an evaluation of the Perutz mechanism [Perutz, M.F. (1970) Nature (London) 228, 726-734, 734-739] and other models for hemoglobin cooperativity is discussed.

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Year:  1988        PMID: 2835088     DOI: 10.1021/bi00404a031

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  High and low oxygen affinity conformations of T state hemoglobin.

Authors:  S Bruno; M Bonaccio; S Bettati; C Rivetti; C Viappiani; S Abbruzzetti; A Mozzarelli
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

2.  Application of linear free energy relations to protein conformational changes: the quaternary structural change of hemoglobin.

Authors:  W A Eaton; E R Henry; J Hofrichter
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

3.  Allosteric effectors do not alter the oxygen affinity of hemoglobin crystals.

Authors:  A Mozzarelli; C Rivetti; G L Rossi; W A Eaton; E R Henry
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

4.  Experiments on Hemoglobin in Single Crystals and Silica Gels Distinguish among Allosteric Models.

Authors:  Eric R Henry; Andrea Mozzarelli; Cristiano Viappiani; Stefania Abbruzzetti; Stefano Bettati; Luca Ronda; Stefano Bruno; William A Eaton
Journal:  Biophys J       Date:  2015-05-30       Impact factor: 4.033

5.  Modulated excitation of singly ligated carboxyhemoglobin.

Authors:  D Liao; J Jiang; M Zhao; F A Ferrone
Journal:  Biophys J       Date:  1993-11       Impact factor: 4.033

6.  Oxygen binding by alpha(Fe2+)2beta(Ni2+)2 hemoglobin crystals.

Authors:  S Bruno; S Bettati; M Manfredini; A Mozzarelli; M Bolognesi; D Deriu; C Rosano; A Tsuneshige; T Yonetani; E R Henry
Journal:  Protein Sci       Date:  2000-04       Impact factor: 6.725

7.  Allosteric kinetics and equilibria differ for carbon monoxide and oxygen binding to hemoglobin.

Authors:  N Q Zhang; F A Ferrone; A J Martino
Journal:  Biophys J       Date:  1990-08       Impact factor: 4.033

8.  Raman dispersion spectroscopy probes heme distortions in deoxyHb-trout IV involved in its T-state Bohr effect.

Authors:  R Schweitzer-Stenner; M Bosenbeck; W Dreybrodt
Journal:  Biophys J       Date:  1993-04       Impact factor: 4.033

9.  Effectors of hemoglobin. Separation of allosteric and affinity factors.

Authors:  M C Marden; B Bohn; J Kister; C Poyart
Journal:  Biophys J       Date:  1990-03       Impact factor: 4.033

10.  Tertiary and quaternary structural basis of oxygen affinity in human hemoglobin as revealed by multiscale simulations.

Authors:  Mauro Bringas; Ariel A Petruk; Darío A Estrin; Luciana Capece; Marcelo A Martí
Journal:  Sci Rep       Date:  2017-09-07       Impact factor: 4.379

  10 in total

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