Literature DB >> 28348241

Structure of the MeCP2-TBLR1 complex reveals a molecular basis for Rett syndrome and related disorders.

Valdeko Kruusvee1, Matthew J Lyst1, Ceitidh Taylor1, Žygimantė Tarnauskaitė2, Adrian P Bird3, Atlanta G Cook3.   

Abstract

Rett syndrome (RTT) is an X-linked neurological disorder caused by mutations in the methyl-CpG-binding protein 2 (MeCP2) gene. The majority of RTT missense mutations disrupt the interaction of the MeCP2 with DNA or the nuclear receptor corepressor (NCoR)/silencing mediator of retinoic acid and thyroid receptors (SMRT) corepressor complex. Here, we show that the "NCoR/SMRT interaction domain" (NID) of MeCP2 directly contacts transducin beta-like 1 (TBL1) and TBL1 related (TBLR1), two paralogs that are core components of NCoR/SMRT. We determine the cocrystal structure of the MeCP2 NID in complex with the WD40 domain of TBLR1 and confirm by in vitro and ex vivo assays that mutation of interacting residues of TBLR1 and TBL1 disrupts binding to MeCP2. Strikingly, the four MeCP2-NID residues mutated in RTT are those residues that make the most extensive contacts with TBLR1. Moreover, missense mutations in the gene for TBLR1 that are associated with intellectual disability also prevent MeCP2 binding. Our study therefore reveals the molecular basis of an interaction that is crucial for optimal brain function.

Entities:  

Keywords:  MeCP2; NCoR/SMRT; Rett syndrome; TBL proteins; intellectual disability

Mesh:

Substances:

Year:  2017        PMID: 28348241      PMCID: PMC5402415          DOI: 10.1073/pnas.1700731114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

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Journal:  J Biol Chem       Date:  2001-07-05       Impact factor: 5.157

2.  Symmetric dimethylation of H3R2 is a newly identified histone mark that supports euchromatin maintenance.

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Journal:  Nat Struct Mol Biol       Date:  2012-01-08       Impact factor: 15.369

3.  A mutant form of MeCP2 protein associated with human Rett syndrome cannot be displaced from methylated DNA by notch in Xenopus embryos.

Authors:  Irina Stancheva; Anne L Collins; Ingatia B Van den Veyver; Huda Zoghbi; Richard R Meehan
Journal:  Mol Cell       Date:  2003-08       Impact factor: 17.970

4.  Structural basis for the assembly of the SMRT/NCoR core transcriptional repression machinery.

Authors:  Jasmeen Oberoi; Louise Fairall; Peter J Watson; Ji-Chun Yang; Zsolt Czimmerer; Thorsten Kampmann; Benjamin T Goult; Jacquie A Greenwood; John T Gooch; Bettina C Kallenberger; Laszlo Nagy; David Neuhaus; John W R Schwabe
Journal:  Nat Struct Mol Biol       Date:  2011-01-16       Impact factor: 15.369

Review 5.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

6.  Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.

Authors:  Brian J O'Roak; Laura Vives; Wenqing Fu; Jarrett D Egertson; Ian B Stanaway; Ian G Phelps; Gemma Carvill; Akash Kumar; Choli Lee; Katy Ankenman; Jeff Munson; Joseph B Hiatt; Emily H Turner; Roie Levy; Diana R O'Day; Niklas Krumm; Bradley P Coe; Beth K Martin; Elhanan Borenstein; Deborah A Nickerson; Heather C Mefford; Dan Doherty; Joshua M Akey; Raphael Bernier; Evan E Eichler; Jay Shendure
Journal:  Science       Date:  2012-11-15       Impact factor: 47.728

7.  Rett syndrome mutation MeCP2 T158A disrupts DNA binding, protein stability and ERP responses.

Authors:  Darren Goffin; Megan Allen; Le Zhang; Maria Amorim; I-Ting Judy Wang; Arith-Ruth S Reyes; Amy Mercado-Berton; Caroline Ong; Sonia Cohen; Linda Hu; Julie A Blendy; Gregory C Carlson; Steve J Siegel; Michael E Greenberg; Zhaolan Zhou
Journal:  Nat Neurosci       Date:  2011-11-27       Impact factor: 24.884

8.  ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures.

Authors:  Meytal Landau; Itay Mayrose; Yossi Rosenberg; Fabian Glaser; Eric Martz; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

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Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  24 in total

Review 1.  Emerging Insights into the Distinctive Neuronal Methylome.

Authors:  Adam W Clemens; Harrison W Gabel
Journal:  Trends Genet       Date:  2020-08-21       Impact factor: 11.639

2.  Understanding the Landscape of X-linked Variants Causing Intellectual Disability in Females Through Extreme X Chromosome Inactivation Skewing.

Authors:  Evelyn Quintanilha Vianna; Rafael Mina Piergiorge; Andressa Pereira Gonçalves; Jussara Mendonça Dos Santos; Veluma Calassara; Carla Rosenberg; Ana Cristina Victorino Krepischi; Raquel Tavares Boy da Silva; Suely Rodrigues Dos Santos; Márcia Gonçalves Ribeiro; Filipe Brum Machado; Enrique Medina-Acosta; Márcia Mattos Gonçalves Pimentel; Cíntia Barros Santos-Rebouças
Journal:  Mol Neurobiol       Date:  2020-06-20       Impact factor: 5.590

Review 3.  Genomic insights into MeCP2 function: A role for the maintenance of chromatin architecture.

Authors:  Daniel R Connolly; Zhaolan Zhou
Journal:  Curr Opin Neurobiol       Date:  2019-08-17       Impact factor: 6.627

Review 4.  Rett syndrome: insights into genetic, molecular and circuit mechanisms.

Authors:  Jacque P K Ip; Nikolaos Mellios; Mriganka Sur
Journal:  Nat Rev Neurosci       Date:  2018-06       Impact factor: 34.870

5.  Absence of MeCP2 binding to non-methylated GT-rich sequences in vivo.

Authors:  John C Connelly; Justyna Cholewa-Waclaw; Shaun Webb; Verdiana Steccanella; Bartlomiej Waclaw; Adrian Bird
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

6.  Toxoplasma gondii secreted effectors co-opt host repressor complexes to inhibit necroptosis.

Authors:  Alex Rosenberg; L David Sibley
Journal:  Cell Host Microbe       Date:  2021-05-26       Impact factor: 31.316

7.  MeCP2 links heterochromatin condensates and neurodevelopmental disease.

Authors:  Charles H Li; Eliot L Coffey; Alessandra Dall'Agnese; Nancy M Hannett; Xin Tang; Jonathan E Henninger; Jesse M Platt; Ozgur Oksuz; Alicia V Zamudio; Lena K Afeyan; Jurian Schuijers; X Shawn Liu; Styliani Markoulaki; Tenzin Lungjangwa; Gary LeRoy; Devon S Svoboda; Emile Wogram; Tong Ihn Lee; Rudolf Jaenisch; Richard A Young
Journal:  Nature       Date:  2020-07-22       Impact factor: 69.504

8.  Radically truncated MeCP2 rescues Rett syndrome-like neurological defects.

Authors:  Rebekah Tillotson; Jim Selfridge; Martha V Koerner; Kamal K E Gadalla; Jacky Guy; Dina De Sousa; Ralph D Hector; Stuart R Cobb; Adrian Bird
Journal:  Nature       Date:  2017-10-11       Impact factor: 49.962

9.  A mutation-led search for novel functional domains in MeCP2.

Authors:  Jacky Guy; Beatrice Alexander-Howden; Laura FitzPatrick; Dina DeSousa; Martha V Koerner; Jim Selfridge; Adrian Bird
Journal:  Hum Mol Genet       Date:  2018-07-15       Impact factor: 6.150

Review 10.  The distinct methylation landscape of maturing neurons and its role in Rett syndrome pathogenesis.

Authors:  Laura A Lavery; Huda Y Zoghbi
Journal:  Curr Opin Neurobiol       Date:  2019-09-19       Impact factor: 6.627

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