Literature DB >> 28341654

Rapid Adaptation of a Polygenic Trait After a Sudden Environmental Shift.

Kavita Jain1, Wolfgang Stephan2,3.   

Abstract

Although a number of studies have shown that natural and laboratory populations initially well adapted to their environment can evolve rapidly when conditions suddenly change, the dynamics of rapid adaptation are not well understood. Here a population genetic model of polygenic selection is analyzed to describe the short-term response of a quantitative trait after a sudden shift of the phenotypic optimum. We provide explicit analytical expressions for the timescales over which the trait mean approaches the new optimum. We find that when the effect sizes are small relative to a scaled mutation rate, small to moderate allele frequency changes occur in the short-term phase in a synergistic fashion. In contrast, selective sweeps, i.e., dramatic changes in the allele frequency, may occur provided the size of the effect is sufficiently large. Applications of our theoretical results to the relationship between QTL and selective sweep mapping and to tests of fast polygenic adaptation are discussed.
Copyright © 2017 by the Genetics Society of America.

Keywords:  polygenic selection; rapid adaptation; unequal effects

Mesh:

Year:  2017        PMID: 28341654      PMCID: PMC5419483          DOI: 10.1534/genetics.116.196972

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  38 in total

1.  Searching for footprints of positive selection in whole-genome SNP data from nonequilibrium populations.

Authors:  Pavlos Pavlidis; Jeffrey D Jensen; Wolfgang Stephan
Journal:  Genetics       Date:  2010-04-20       Impact factor: 4.562

2.  Natural and sexual selection on many loci.

Authors:  N H Barton; M Turelli
Journal:  Genetics       Date:  1991-01       Impact factor: 4.562

3.  Using environmental correlations to identify loci underlying local adaptation.

Authors:  Graham Coop; David Witonsky; Anna Di Rienzo; Jonathan K Pritchard
Journal:  Genetics       Date:  2010-06-01       Impact factor: 4.562

4.  The hitch-hiking effect of a favourable gene.

Authors:  J M Smith; J Haigh
Journal:  Genet Res       Date:  1974-02       Impact factor: 1.588

5.  Evolution of Darwin's finches and their beaks revealed by genome sequencing.

Authors:  Sangeet Lamichhaney; Jonas Berglund; Markus Sällman Almén; Khurram Maqbool; Manfred Grabherr; Alvaro Martinez-Barrio; Marta Promerová; Carl-Johan Rubin; Chao Wang; Neda Zamani; B Rosemary Grant; Peter R Grant; Matthew T Webster; Leif Andersson
Journal:  Nature       Date:  2015-02-11       Impact factor: 49.962

6.  Identification of X-linked quantitative trait loci affecting cold tolerance in Drosophila melanogaster and fine mapping by selective sweep analysis.

Authors:  Nicolas Svetec; Annegret Werzner; Ricardo Wilches; Pavlos Pavlidis; José M Alvarez-Castro; Karl W Broman; Dirk Metzler; Wolfgang Stephan
Journal:  Mol Ecol       Date:  2010-12-24       Impact factor: 6.185

7.  A single p450 allele associated with insecticide resistance in Drosophila.

Authors:  P J Daborn; J L Yen; M R Bogwitz; G Le Goff; E Feil; S Jeffers; N Tijet; T Perry; D Heckel; P Batterham; R Feyereisen; T G Wilson; R H ffrench-Constant
Journal:  Science       Date:  2002-09-27       Impact factor: 47.728

8.  Stability and response of polygenic traits to stabilizing selection and mutation.

Authors:  Harold P de Vladar; Nick Barton
Journal:  Genetics       Date:  2014-04-07       Impact factor: 4.562

9.  Genetics, adaptation, and invasion in harsh environments.

Authors:  Richard Gomulkiewicz; Robert D Holt; Michael Barfield; Scott L Nuismer
Journal:  Evol Appl       Date:  2010-03       Impact factor: 5.183

10.  Selective bird predation on the peppered moth: the last experiment of Michael Majerus.

Authors:  L M Cook; B S Grant; I J Saccheri; J Mallet
Journal:  Biol Lett       Date:  2012-02-08       Impact factor: 3.703

View more
  25 in total

1.  Background Selection Does Not Mimic the Patterns of Genetic Diversity Produced by Selective Sweeps.

Authors:  Daniel R Schrider
Journal:  Genetics       Date:  2020-08-26       Impact factor: 4.562

Review 2.  Evolutionary perspectives on polygenic selection, missing heritability, and GWAS.

Authors:  Lawrence H Uricchio
Journal:  Hum Genet       Date:  2019-06-14       Impact factor: 4.132

3.  The Neutral Theory in Light of Natural Selection.

Authors:  Andrew D Kern; Matthew W Hahn
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

4.  The Linked Selection Signature of Rapid Adaptation in Temporal Genomic Data.

Authors:  Vince Buffalo; Graham Coop
Journal:  Genetics       Date:  2019-09-26       Impact factor: 4.562

5.  Selective Sweep at a QTL in a Randomly Fluctuating Environment.

Authors:  Luis-Miguel Chevin
Journal:  Genetics       Date:  2019-09-16       Impact factor: 4.562

6.  Different genetic basis for alcohol dehydrogenase activity and plasticity in a novel alcohol environment for Drosophila melanogaster.

Authors:  Sheng Pei Wang; David M Althoff
Journal:  Heredity (Edinb)       Date:  2020-06-01       Impact factor: 3.821

7.  Pervasive Linked Selection and Intermediate-Frequency Alleles Are Implicated in an Evolve-and-Resequencing Experiment of Drosophila simulans.

Authors:  John K Kelly; Kimberly A Hughes
Journal:  Genetics       Date:  2018-12-28       Impact factor: 4.562

Review 8.  Polygenic adaptation: a unifying framework to understand positive selection.

Authors:  Neda Barghi; Joachim Hermisson; Christian Schlötterer
Journal:  Nat Rev Genet       Date:  2020-06-29       Impact factor: 53.242

Review 9.  Detecting positive selection in the genome.

Authors:  Tom R Booker; Benjamin C Jackson; Peter D Keightley
Journal:  BMC Biol       Date:  2017-10-30       Impact factor: 7.431

10.  A population genetic interpretation of GWAS findings for human quantitative traits.

Authors:  Yuval B Simons; Kevin Bullaughey; Richard R Hudson; Guy Sella
Journal:  PLoS Biol       Date:  2018-03-16       Impact factor: 8.029

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.