Literature DB >> 2833361

One member of the tRNA(Glu) gene family in yeast codes for a minor GAGtRNA(Glu) species and is associated with several short transposable elements.

R Stucka1, J Hauber, H Feldmann.   

Abstract

During characterization of the whole tRNA-(Glu) family from the yeast, Saccharomyces cerevisiae, we isolated one cosmid clone bearing a tRNA(Glu) gene copy that is deviant from the major tRNA(Glu3) gene members in only five positions. This divergent tRNA-(Glu) is a minor species and is represented by a single gene copy. One of the nucleotide exchanges concerns the anticodon which is modified from T-T-C in the tRNA(Glu3) gene to C-T-C which implies that this tRNA serves the codon triplet G-A-G. Two other minor yeast tRNA species have been reported which appear to be particularly designed for the translation of those codons that have a G in its third (Wobble) position. The low abundance of such minor tRNA species correlates positively to the low occurrence of most of the N-N-G codons in yeast. Furthermore, the GAGtRNA-(Glu) locus represents another case of the general phenomenon in which the majority of the tRNA genes in yeast are associated with one or several transposable elements forming complex patterns. In this particular case, divergent segments of delta and tau are present in the 5' flanking region of the tRNA gene and arranged in a novel configuration. The sequence data lend support to the view that tau is not an evolutionary young element as was earlier anticipated.

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Year:  1987        PMID: 2833361     DOI: 10.1007/BF00405754

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  28 in total

1.  The primary structure of yeast glutamic acid tRNA specific to the GAA codon.

Authors:  T Kobayashi; T Irie; M Yoshida; K Takeishi; T Ukita
Journal:  Biochim Biophys Acta       Date:  1974-10-11

2.  Compilation of tRNA sequences.

Authors:  M Sprinzl; J Moll; F Meissner; T Hartmann
Journal:  Nucleic Acids Res       Date:  1985       Impact factor: 16.971

3.  Structural comparison of two yeast tRNA Glu 3 genes.

Authors:  A Eigel; J Olah; H Feldmann
Journal:  Nucleic Acids Res       Date:  1981-06-25       Impact factor: 16.971

4.  sigma, a repetitive element found adjacent to tRNA genes of yeast.

Authors:  F J del Rey; T F Donahue; G R Fink
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

5.  Correspondence of yeast UAA suppressors to cloned tRNASerUCA genes.

Authors:  J R Broach; L Friedman; F Sherman
Journal:  J Mol Biol       Date:  1981-08-15       Impact factor: 5.469

6.  Insertion of a repetitive element at the same position in the 5'-flanking regions of two dissimilar yeast tRNA genes.

Authors:  S B Sandmeyer; M V Olson
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

7.  Characterization of the yeast tRNA Ser genomic organization and DNA sequence.

Authors:  G S Page; B D Hall
Journal:  Nucleic Acids Res       Date:  1981-02-25       Impact factor: 16.971

8.  The structures of two serine transfer ribonucleic acids.

Authors:  H G Zachau; D Dütting; H Feldmann
Journal:  Hoppe Seylers Z Physiol Chem       Date:  1966

9.  Tau, sigma, and delta. A family of repeated elements in yeast.

Authors:  F S Genbauffe; G E Chisholm; T G Cooper
Journal:  J Biol Chem       Date:  1984-08-25       Impact factor: 5.157

10.  Successive transposition explosions in Drosophila melanogaster and reverse transpositions of mobile dispersed genetic elements.

Authors:  T I Gerasimova; L V Matjunina; L J Mizrokhi; G P Georgiev
Journal:  EMBO J       Date:  1985-12-30       Impact factor: 11.598

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  5 in total

1.  The use of a synthetic tRNA gene as a novel approach to study in vivo transcription and chromatin structure in yeast.

Authors:  R Krieg; R Stucka; S Clark; H Feldmann
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

2.  Analysis of yeast chromosomal regions carrying members of the glutamate tRNA gene family: various transposable elements are associated with them.

Authors:  J Hauber; R Stucka; R Krieg; H Feldmann
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

3.  A hot-spot for transposition of various Ty elements on chromosome V in Saccharomyces cerevisiae.

Authors:  H Lochmüller; R Stucka; H Feldmann
Journal:  Curr Genet       Date:  1989-10       Impact factor: 3.886

4.  Ty4, a novel low-copy number element in Saccharomyces cerevisiae: one copy is located in a cluster of Ty elements and tRNA genes.

Authors:  R Stucka; H Lochmüller; H Feldmann
Journal:  Nucleic Acids Res       Date:  1989-07-11       Impact factor: 16.971

5.  Two Saccharomyces cerevisiae genes which control sensitivity to G1 arrest induced by Kluyveromyces lactis toxin.

Authors:  A R Butler; J H White; Y Folawiyo; A Edlin; D Gardiner; M J Stark
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

  5 in total

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