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Literature DB >> 2560682

A hot-spot for transposition of various Ty elements on chromosome V in Saccharomyces cerevisiae.

Abstract

Ty4 is a novel transposable element in the yeast, Saccharomyces cerevisiae, which is present in only a few copies in the genome (Stucka et al. 1989). In strain C836 one of the three copies (Ty4-90) is contained in cosmid clone c90, where it resides on chromosome V. Analysis of this region reveals a "hot-spot" of transposition: in addition to Ty4-90, the locus contains a complete Ty3 element and seven singular delta, sigma and tau elements. Three tRNA genes (for His, Lys, and Ile) are located in this region, and these are closely associated with one or the other of the elements, a phenomenon commonly observed in yeast. A comparison of c90 with corresponding regions from other strains shows that the locus is highly polymorphic and that this polymorphism is explicitly associated with Ty transposition and recombination events.

Entities: Chemical Species

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Year: 1989 PMID： 2560682 DOI： 10.1007/BF00422110

Source DB: PubMed Journal: Curr Genet ISSN： 0172-8083 Impact factor: 3.886

25 in total

1. Polymorphisms on the right arm of yeast chromosome III associated with Ty transposition and recombination events.

Authors: J R Warmington; R P Green; C S Newlon; S G Oliver
Journal: Nucleic Acids Res Date: 1987-11-11 Impact factor: 16.971

Review 2. Ty: a retroelement moving forward.

Authors: A J Kingsman; S M Kingsman
Journal: Cell Date: 1988-05-06 Impact factor: 41.582

3. Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes.

Authors: P M Sharp; T M Tuohy; K R Mosurski
Journal: Nucleic Acids Res Date: 1986-07-11 Impact factor: 16.971

4. The same configuration of Ty elements promotes different types and frequencies of rearrangements in different yeast strains.

Authors: S Picologlou; M E Dicig; P Kovarik; S W Liebman
Journal: Mol Gen Genet Date: 1988-02

5. Nucleotide sequence of yeast LEU2 shows 5'-noncoding region has sequences cognate to leucine.

Authors: A Andreadis; Y P Hsu; G B Kohlhaw; P Schimmel
Journal: Cell Date: 1982-12 Impact factor: 41.582

6. Ty4, a novel low-copy number element in Saccharomyces cerevisiae: one copy is located in a cluster of Ty elements and tRNA genes.

Authors: R Stucka; H Lochmüller; H Feldmann
Journal: Nucleic Acids Res Date: 1989-07-11 Impact factor: 16.971

7. The structure and coding specificity of a lysine transfer ribonucleic acid from the haploid yeast Saccharomyces cerevisiae alpha S288C.

Authors: C J Smith; A N Ley; P D'Obrenan; S K Mitra
Journal: J Biol Chem Date: 1971-12-25 Impact factor: 5.157

3. Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions.

Authors: A Pavesi; F Conterio; A Bolchi; G Dieci; S Ottonello
Journal: Nucleic Acids Res Date: 1994-04-11 Impact factor: 16.971

4. tRNA genes and retroelements in the yeast genome.

Authors: J Hani; H Feldmann
Journal: Nucleic Acids Res Date: 1998-02-01 Impact factor: 16.971

5. A temperature-regulated, retrotransposon-like element from Candida albicans.

Authors: J Y Chen; W A Fonzi
Journal: J Bacteriol Date: 1992-09 Impact factor: 3.490

5 in total

A hot-spot for transposition of various Ty elements on chromosome V in Saccharomyces cerevisiae.

1. Polymorphisms on the right arm of yeast chromosome III associated with Ty transposition and recombination events.

Review 2. Ty: a retroelement moving forward.

3. Codon usage in yeast: cluster analysis clearly differentiates highly and lowly expressed genes.

4. The same configuration of Ty elements promotes different types and frequencies of rearrangements in different yeast strains.

5. Nucleotide sequence of yeast LEU2 shows 5'-noncoding region has sequences cognate to leucine.

6. Ty4, a novel low-copy number element in Saccharomyces cerevisiae: one copy is located in a cluster of Ty elements and tRNA genes.

7. The structure and coding specificity of a lysine transfer ribonucleic acid from the haploid yeast Saccharomyces cerevisiae alpha S288C.

8. Tau, sigma, and delta. A family of repeated elements in yeast.

9. Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses.

10. Conserved and non-conserved features among the yeast Ty elements.

1. Sequence of a locus on chromosome VII encompassing a tRNA(Lys) gene in Saccharomyces cerevisiae.

2. The use of a synthetic tRNA gene as a novel approach to study in vivo transcription and chromatin structure in yeast.

3. Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions.

4. tRNA genes and retroelements in the yeast genome.

5. A temperature-regulated, retrotransposon-like element from Candida albicans.